Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN27G3154 Fragaria x ananassa HOM05D006317 ORTHO05D007852 5.9e-43 177.2 93 100.0
FvH4_2g27730 Fragaria vesca HOM05D006317 ORTHO05D007852 5.6e-41 170.6 91 97.8
FAN20G1754 Fragaria x ananassa HOM05D006317 ORTHO05D007852 5.6e-41 170.6 91 97.8
FAN24G3505 Fragaria x ananassa HOM05D006317 ORTHO05D007852 5.6e-41 170.6 91 97.8
Eucgr.D00248 Eucalyptus grandis HOM05D006317 ORTHO05D007852 1.5e-38 162.5 91 91.2
Sed0004620 Sechium edule HOM05D006317 ORTHO05D007852 9.8e-38 159.8 91 89.0
Manes.02G167400 Manihot esculenta HOM05D006317 ORTHO05D007852 3.7e-37 157.9 91 87.9
RcHm_v2.0_Chr6g0296581 Rosa chinensis HOM05D006317 ORTHO05D007852 3.7e-37 157.9 91 89.0
Duzib041G0795 Durio zibethinus HOM05D006317 ORTHO05D007852 8.3e-37 156.8 91 86.8
Manes.18G081900 Manihot esculenta HOM05D006317 ORTHO05D007852 1.1e-36 156.4 91 86.8
COL.COLO4_05688 Corchorus olitorius HOM05D006317 ORTHO05D007852 1.4e-36 156.0 92 83.7
CsaV3_6G034090 Cucumis sativus L. HOM05D006317 ORTHO05D007852 1.4e-36 156.0 91 86.8
Dinv27277 Davidia involucrata HOM05D006317 ORTHO05D007852 1.4e-36 156.0 91 87.9
TAR375G0871 Trochodendron aralioides HOM05D006317 ORTHO05D007852 1.4e-36 156.0 91 85.7
Gohir.A05G237800 Gossypium hirsutum HOM05D006317 ORTHO05D007852 1.9e-36 155.6 91 89.0
Duzib116G0606 Durio zibethinus HOM05D006317 ORTHO05D007852 2.4e-36 155.2 91 85.7
Lj1g0010212 Lotus japonicus HOM05D006317 ORTHO05D007852 2.4e-36 155.2 91 86.8
Lalb_Chr08g0241161 Lupinus albus HOM05D006317 ORTHO05D007852 2.4e-36 155.2 91 89.0
Hma1.2p1_0420F.1_g149670 Hydrangea macrophylla HOM05D006317 ORTHO05D007852 3.2e-36 154.8 91 85.7
Gohir.D05G239800 Gossypium hirsutum HOM05D006317 ORTHO05D007852 4.1e-36 154.5 91 87.9
Gorai.009G248700 Gossypium raimondii HOM05D006317 ORTHO05D007852 4.1e-36 154.5 91 87.9
Cfa018120 Carpinus fangiana HOM05D006317 ORTHO05D007852 5.4e-36 154.1 91 84.6
Phvul.009G129100 Phaseolus vulgaris HOM05D006317 ORTHO05D007852 5.4e-36 154.1 91 87.9
MELO3C010655.2 Cucumis melo HOM05D006317 ORTHO05D007852 7.0e-36 153.7 91 87.9
Potri.019G066600 Populus trichocarpa HOM05D006317 ORTHO05D007852 7.0e-36 153.7 90 86.7
QL09p032738 Quercus lobata HOM05D006317 ORTHO05D007852 7.0e-36 153.7 91 84.6
Glyma.04G246100 Glycine max HOM05D006317 ORTHO05D007852 9.2e-36 153.3 91 86.8
Medtr3g088525 Medicago truncatula HOM05D006317 ORTHO05D007852 9.2e-36 153.3 91 86.8
Thecc.08G132100 Theobroma cacao HOM05D006317 ORTHO05D007852 9.2e-36 153.3 91 85.7
Prupe.1G490600 Prunus persica HOM05D006317 ORTHO05D007852 1.2e-35 152.9 91 86.8
GSVIVG01036785001 Vitis vinifera HOM05D006317 ORTHO05D007852 1.2e-35 152.9 91 85.7
Glyma.06G116700 Glycine max HOM05D006317 ORTHO05D007852 1.6e-35 152.5 91 87.9
VMungo1309G0699 Vigna mungo HOM05D006317 ORTHO05D007852 1.6e-35 152.5 91 87.9
arahy.Tifrunner.gnm1.ann1.0GY0RD Arachis hypogaea HOM05D006317 ORTHO05D007852 2.0e-35 152.1 91 85.7
arahy.Tifrunner.gnm1.ann1.ID1H8K Arachis hypogaea HOM05D006317 ORTHO05D007852 2.0e-35 152.1 91 85.7
Dinv14667 Davidia involucrata HOM05D006317 ORTHO05D007852 2.0e-35 152.1 91 86.8
MSTRG.25364 Avicennia marina HOM05D006317 ORTHO05D007852 2.7e-35 151.8 91 82.4
CSS0006686 Camellia sinensis var. sinensis HOM05D006317 ORTHO05D007852 2.7e-35 151.8 91 84.6
Cpa.g.sc64.145 Carica papaya HOM05D006317 ORTHO05D007852 2.7e-35 151.8 91 84.6
TWI32G0551 Tripterygium wilfordii HOM05D006317 ORTHO05D007852 2.7e-35 151.8 91 85.7
CiPaw.15G032500 Carya illinoinensis HOM05D006317 ORTHO05D007852 3.5e-35 151.4 91 84.6
CANSAT35G0412 Cannabis sativa HOM05D006317 ORTHO05D007852 4.6e-35 151.0 91 84.6
Psat5g085080 Pisum sativum HOM05D006317 ORTHO05D007852 4.6e-35 151.0 91 86.8
Rhsim11G0071000 Rhododendron simsii HOM05D006317 ORTHO05D007852 4.6e-35 151.0 91 84.6
Migut.N03266 Erythranthe guttata HOM05D006317 ORTHO05D007852 6.0e-35 150.6 91 83.5
Sed0014816 Sechium edule HOM05D006317 ORTHO05D007852 6.0e-35 150.6 91 85.7
CSS0008085 Camellia sinensis var. sinensis HOM05D006317 ORTHO05D007852 7.8e-35 150.2 91 83.5
CSS0027136 Camellia sinensis var. sinensis HOM05D006317 ORTHO05D007852 7.8e-35 150.2 91 83.5
Lalb_Chr23g0271161 Lupinus albus HOM05D006317 ORTHO05D007852 7.8e-35 150.2 91 86.8
Nn1g09356 Nelumbo nucifera HOM05D006317 ORTHO05D007852 7.8e-35 150.2 91 79.1
Actinidia29484 Actinidia chinensis HOM05D006317 ORTHO05D007852 1.3e-34 149.4 91 84.6
vmacro00858 Vaccinium macrocarpon HOM05D006317 ORTHO05D007852 1.3e-34 149.4 92 81.5
TWI34G0863 Tripterygium wilfordii HOM05D006317 ORTHO05D007852 2.3e-34 148.7 91 83.5
Nitab4.5_0001168g0010 Nicotiana tabacum HOM05D006317 ORTHO05D007852 3.9e-34 147.9 91 80.2
Ciclev10002865m.g Citrus clementina HOM05D006317 ORTHO05D007852 5.0e-34 147.5 91 82.4
Peaxi162Scf01003g00121 Petunia axillaris HOM05D006317 ORTHO05D007852 5.0e-34 147.5 91 81.3
Atru.chr13.1550 Acer truncatum HOM05D006317 ORTHO05D007852 8.6e-34 146.7 91 81.3
ATR1101G062 Amborella trichopoda HOM05D006317 ORTHO05D007852 8.6e-34 146.7 91 79.1
Sc10g0008060 Simmondsia chinensis HOM05D006317 ORTHO05D007852 8.6e-34 146.7 91 79.1
CAN.G342.14 Capsicum annuum HOM05D006317 ORTHO05D007852 1.1e-33 146.4 91 80.2
unitig_22.g5398 Utricularia gibba HOM05D006317 ORTHO05D007852 1.1e-33 146.4 91 83.5
Nitab4.5_0002045g0100 Nicotiana tabacum HOM05D006317 ORTHO05D007852 1.5e-33 146.0 91 79.1
PGR044G1554 Punica granatum HOM05D006317 ORTHO05D007852 1.5e-33 146.0 91 82.4
Cc10_g12550 Coffea canephora HOM05D006317 ORTHO05D007852 1.9e-33 145.6 91 81.3
THA.LOC104813677 Tarenaya hassleriana HOM05D006317 ORTHO05D007852 1.9e-33 145.6 91 81.3
ECA246G3352 Erigeron canadensis HOM05D006317 ORTHO05D007852 2.5e-33 145.2 91 82.4
Lsat_1_v5_gn_6_109060 Lactuca sativa HOM05D006317 ORTHO05D007852 2.5e-33 145.2 91 81.3
Oeu051968.1 Olea europaea HOM05D006317 ORTHO05D007852 3.3e-33 144.8 91 81.3
CDE06G2198 Ceratophyllum demersum HOM05D006317 ORTHO05D007852 4.3e-33 144.4 91 76.9
Oeu021883.1 Olea europaea HOM05D006317 ORTHO05D007852 9.5e-33 143.3 91 80.2
unitig_8.g3836 Utricularia gibba HOM05D006317 ORTHO05D007852 9.5e-33 143.3 91 79.1
Aa31LG4G7370 Aethionema arabicum HOM05D006317 ORTHO05D007852 2.1e-32 142.1 91 80.2
SGA_v2.0_scaffold25G11134 Striga asiatica HOM05D006317 ORTHO05D007852 2.1e-32 142.1 91 80.2
vmacro16444 Vaccinium macrocarpon HOM05D006317 ORTHO05D007852 2.1e-32 142.1 91 81.3
Aqoxy1G01739 Aquilegia oxysepala HOM05D006317 ORTHO05D007852 3.6e-32 141.4 91 78.0
CDE07G1891 Ceratophyllum demersum HOM05D006317 ORTHO05D007852 3.6e-32 141.4 91 79.1
MBI03_g35425_MAGBIO Magnolia biondii HOM05D006317 ORTHO05D007852 3.6e-32 141.4 91 75.8
SalBow2G0856 Salvia bowleyana HOM05D006317 ORTHO05D007852 3.6e-32 141.4 91 79.1
Solyc11g005000.2 Solanum lycopersicum HOM05D006317 ORTHO05D007852 3.6e-32 141.4 91 78.0
Carub.0002s2423 Capsella rubella HOM05D006317 ORTHO05D007852 4.7e-32 141.0 91 79.1
PGSC0003DMG400006049 Solanum tuberosum HOM05D006317 ORTHO05D007852 4.7e-32 141.0 91 79.1
Sopen11g001020 Solanum pennellii HOM05D006317 ORTHO05D007852 8.1e-32 140.2 91 76.9
CARHR070830 Cardamine hirsuta HOM05D006317 ORTHO05D007852 1.4e-31 139.4 91 78.0
Thhalv10019323m.g Eutrema salsugineum HOM05D006317 ORTHO05D007852 3.1e-31 138.3 91 78.0
HanXRQChr05g0148711 Helianthus annuus HOM05D006317 ORTHO05D007852 5.2e-31 137.5 84 83.3
AT1G77350 Arabidopsis thaliana HOM05D006317 ORTHO05D007852 1.2e-30 136.3 92 77.2
BcaB07g32159 Brassica carinata HOM05D006317 ORTHO05D007852 1.2e-30 136.3 91 76.9
A08p28870 Brassica napus HOM05D006317 ORTHO05D007852 2.6e-30 135.2 91 76.9
BraA08t34818Z Brassica rapa HOM05D006317 ORTHO05D007852 2.6e-30 135.2 91 76.9
Sabra19G0078300 Salix brachista HOM05D006317 ORTHO05D007852 2.6e-30 135.2 104 73.1
BraA06t24865Z Brassica rapa HOM05D006317 ORTHO05D007852 3.4e-30 134.8 91 74.7
ClCG08G005990 Citrullus lanatus HOM05D006317 ORTHO05D007852 5.8e-30 134.0 141 56.7
A06p17730 Brassica napus HOM05D006317 ORTHO05D007852 7.5e-30 133.7 91 74.7
Ah.01g020580 Amaranthus hybridus HOM05D006317 ORTHO05D007852 1.3e-29 132.9 91 72.5
BcaC06g34898 Brassica carinata HOM05D006317 ORTHO05D007852 1.7e-29 132.5 90 74.4
A07p14980 Brassica napus HOM05D006317 ORTHO05D007852 1.7e-29 132.5 90 74.4
C08p20980 Brassica napus HOM05D006317 ORTHO05D007852 1.7e-29 132.5 91 74.7
BolC7t42733H Brassica oleracea HOM05D006317 ORTHO05D007852 1.7e-29 132.5 90 74.4
BolC8t49735H Brassica oleracea HOM05D006317 ORTHO05D007852 1.7e-29 132.5 91 74.7
BraA07t29244Z Brassica rapa HOM05D006317 ORTHO05D007852 1.7e-29 132.5 90 74.4
EL10Ac9g21899 Beta vulgaris HOM05D006317 ORTHO05D007852 2.2e-29 132.1 91 72.5
BcaB03g14259 Brassica carinata HOM05D006317 ORTHO05D007852 3.7e-29 131.3 91 72.5
Sp1g19190 Schrenkiella parvula HOM05D006317 ORTHO05D007852 3.7e-29 131.3 91 73.6
AUR62016336 Chenopodium quinoa HOM05D006317 ORTHO05D007852 4.9e-29 131.0 91 72.5
C07p22030 Brassica napus HOM05D006317 ORTHO05D007852 6.4e-29 130.6 89 74.2
Thhalv10009123m.g Eutrema salsugineum HOM05D006317 ORTHO05D007852 1.4e-28 129.4 92 75.0
HPP92_021212 Vanilla planifolia HOM05D006317 ORTHO05D007852 6.0e-27 124.0 91 70.3
Os05g0486200 Oryza sativa ssp. japonica HOM05D006317 ORTHO05D007852 7.8e-27 123.6 87 74.7
Zm00001eb128810 Zea mays HOM05D006317 ORTHO05D007852 7.8e-27 123.6 91 70.3
Mapoly0014s0111 Marchantia polymorpha HOM05D006317 ORTHO05D007852 1.7e-26 122.5 91 64.8
SHI09189 Sapria himalayana HOM05D006317 ORTHO05D007852 1.7e-26 122.5 102 63.7
AL2G37550 Arabidopsis lyrata HOM05D006317 ORTHO05D007852 5.1e-26 120.9 117 60.7
DCAR_018876 Daucus carota HOM05D006317 ORTHO05D007852 6.6e-26 120.6 69 89.9
AagrBONN_evm.TU.Sc2ySwM_344.4689 Anthoceros agrestis HOM05D006317 ORTHO05D007852 1.1e-25 119.8 91 62.6
Nn7g37402 Nelumbo nucifera HOM05D006317 ORTHO05D007852 1.1e-25 119.8 69 79.7
MBI06_g36652_MAGBIO Magnolia biondii HOM05D006317 ORTHO05D007852 4.7e-24 114.4 91 65.9
CBR_g12067 Chara braunii HOM05D006317 ORTHO05D007852 8.9e-23 110.2 88 62.5
SMO298G0052 Selaginella moellendorffii HOM05D006317 ORTHO05D007852 2.0e-22 109.0 85 64.7
BcaB03g14260 Brassica carinata HOM05D006317 ORTHO05D007852 2.3e-18 95.5 94 59.6
Gohir.A02G071601 Gossypium hirsutum HOM05D006317 ORTHO05D007852 7.3e-17 90.5 58 82.8
CSS0043705 Camellia sinensis var. sinensis HOM05D006317 ORTHO05D007852 3.1e-15 85.1 46 84.8
SGA_v2.0_scaffold28G11977 Striga asiatica HOM05D006317 ORTHO05D007852 3.2e-12 75.1 52 75.0
FAN15G1039 Fragaria x ananassa HOM05D006317 ORTHO05D007852 4.6e-11 71.2 37 91.9
BolC5t30761H Brassica oleracea HOM05D006317 ORTHO05D007852 6.6e-10 67.4 52 69.2
Haze_17997 Corylus avellana HOM05D001650 ORTHO05D001592 1.1e-07 60.1 88 42.0


User provided reference genes

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