Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN27G3133 Fragaria x ananassa HOM05D006934 ORTHO05D008743 6.6e-309 1063.1 517 100.0
FvH4_2g41120 Fragaria vesca HOM05D006934 ORTHO05D008743 4.3e-300 1033.9 517 97.7
RcHm_v2.0_Chr6g0299421 Rosa chinensis HOM05D006934 ORTHO05D008743 5.4e-279 963.8 519 90.9
Prupe.1G393700 Prunus persica HOM05D006934 ORTHO05D008743 8.5e-248 860.1 498 81.9
MD15G1040400 Malus domestica HOM05D006934 ORTHO05D008743 1.3e-243 846.3 524 78.6
Haze_21418 Corylus avellana HOM05D006934 ORTHO05D008743 3.5e-233 811.6 517 76.4
Cfa013059 Carpinus fangiana HOM05D006934 ORTHO05D008743 2.7e-230 802.0 504 76.8
Atru.chr7.2565 Acer truncatum HOM05D006934 ORTHO05D008743 2.0e-228 795.8 506 75.9
Dinv11656 Davidia involucrata HOM05D006934 ORTHO05D008743 8.2e-227 790.4 512 73.8
GSVIVG01035967001 Vitis vinifera HOM05D006934 ORTHO05D008743 8.5e-224 780.4 516 74.2
CSS0041678 Camellia sinensis var. sinensis HOM05D006934 ORTHO05D008743 2.5e-223 778.9 519 72.1
CSS0048576 Camellia sinensis var. sinensis HOM05D006934 ORTHO05D008743 2.5e-223 778.9 519 72.1
Manes.03G008700 Manihot esculenta HOM05D006934 ORTHO05D008743 3.2e-223 778.5 492 75.8
Cpa.g.sc127.37 Carica papaya HOM05D006934 ORTHO05D008743 5.5e-223 777.7 507 73.6
Eucgr.C02612 Eucalyptus grandis HOM05D006934 ORTHO05D008743 1.6e-222 776.2 496 76.0
Hma1.2p1_0706F.1_g207020 Hydrangea macrophylla HOM05D006934 ORTHO05D008743 2.1e-222 775.8 515 72.2
Potri.018G018700 Populus trichocarpa HOM05D006934 ORTHO05D008743 2.3e-221 772.3 498 73.5
Rhsim02G0213000 Rhododendron simsii HOM05D006934 ORTHO05D008743 4.0e-221 771.5 512 73.2
QL02p018881 Quercus lobata HOM05D006934 ORTHO05D008743 4.4e-220 768.1 512 74.0
CANSAT25G0127 Cannabis sativa HOM05D006934 ORTHO05D008743 5.7e-220 767.7 509 71.3
Lalb_Chr23g0268221 Lupinus albus HOM05D006934 ORTHO05D008743 5.7e-220 767.7 508 71.9
Sabra18G0021400 Salix brachista HOM05D006934 ORTHO05D008743 9.8e-220 766.9 516 72.1
TWI34G0497 Tripterygium wilfordii HOM05D006934 ORTHO05D008743 3.7e-219 765.0 518 71.4
Actinidia10522 Actinidia chinensis HOM05D006934 ORTHO05D008743 5.4e-218 761.1 521 72.4
Ciclev10008002m.g Citrus clementina HOM05D006934 ORTHO05D008743 2.0e-217 759.2 513 70.2
MSTRG.25834 Avicennia marina HOM05D006934 ORTHO05D008743 2.7e-217 758.8 491 73.7
Psat5g033000 Pisum sativum HOM05D006934 ORTHO05D008743 2.7e-217 758.8 506 71.9
Ca_15778_v3 Cicer arietinum L. HOM05D006934 ORTHO05D008743 3.5e-217 758.4 493 73.2
Thecc.09G015800 Theobroma cacao HOM05D006934 ORTHO05D008743 4.5e-217 758.1 517 71.6
Solyc08g068580.4 Solanum lycopersicum HOM05D006934 ORTHO05D008743 5.9e-217 757.7 490 73.9
TPR.G1832 Trifolium pratense HOM05D006934 ORTHO05D008743 7.7e-217 757.3 501 72.3
PGR044G1250 Punica granatum HOM05D006934 ORTHO05D008743 1.3e-216 756.5 517 71.4
Lj1g0027414 Lotus japonicus HOM05D006934 ORTHO05D008743 2.2e-216 755.7 505 72.7
Sopen08g022340 Solanum pennellii HOM05D006934 ORTHO05D008743 2.9e-216 755.4 490 74.1
AUR62024810 Chenopodium quinoa HOM05D006934 ORTHO05D008743 5.0e-216 754.6 520 70.4
vmacro11241 Vaccinium macrocarpon HOM05D006934 ORTHO05D008743 5.0e-216 754.6 554 67.9
AUR62032410 Chenopodium quinoa HOM05D006934 ORTHO05D008743 6.5e-216 754.2 518 70.7
TAR626G1595 Trochodendron aralioides HOM05D006934 ORTHO05D008743 6.5e-216 754.2 489 72.8
CAN.G21.49 Capsicum annuum HOM05D006934 ORTHO05D008743 1.1e-215 753.4 504 72.0
ECA236G4849 Erigeron canadensis HOM05D006934 ORTHO05D008743 1.5e-215 753.1 488 72.3
HanXRQChr06g0176741 Helianthus annuus HOM05D006934 ORTHO05D008743 1.5e-215 753.1 499 71.5
Nitab4.5_0006202g0030 Nicotiana tabacum HOM05D006934 ORTHO05D008743 1.9e-215 752.7 490 73.3
EL10Ac2g02505 Beta vulgaris HOM05D006934 ORTHO05D008743 3.2e-215 751.9 521 71.4
Cc08_g06990 Coffea canephora HOM05D006934 ORTHO05D008743 4.2e-215 751.5 488 72.3
Eucgr.C02525 Eucalyptus grandis HOM05D006934 ORTHO05D008743 1.2e-214 750.0 492 73.4
Medtr3g105980 Medicago truncatula HOM05D006934 ORTHO05D008743 8.0e-214 747.3 482 74.1
Aqoxy5G03587 Aquilegia oxysepala HOM05D006934 ORTHO05D008743 1.4e-213 746.5 518 69.1
Eucgr.C02611 Eucalyptus grandis HOM05D006934 ORTHO05D008743 2.3e-213 745.7 492 73.0
COL.COLO4_18949 Corchorus olitorius HOM05D006934 ORTHO05D008743 3.0e-213 745.3 517 69.1
Migut.A00351 Erythranthe guttata HOM05D006934 ORTHO05D008743 4.0e-213 745.0 495 71.7
CiPaw.07G230200 Carya illinoinensis HOM05D006934 ORTHO05D008743 8.8e-213 743.8 467 75.8
Glyma.06G061500 Glycine max HOM05D006934 ORTHO05D008743 8.8e-213 743.8 491 71.9
Duzib168G1051 Durio zibethinus HOM05D006934 ORTHO05D008743 2.0e-212 742.7 517 69.8
MBI15_g19327_MAGBIO Magnolia biondii HOM05D006934 ORTHO05D008743 2.6e-212 742.3 483 72.0
VMungo1309G2247 Vigna mungo HOM05D006934 ORTHO05D008743 4.4e-212 741.5 498 71.7
Lsat_1_v5_gn_8_82201 Lactuca sativa HOM05D006934 ORTHO05D008743 1.7e-211 739.6 499 70.3
Phvul.009G087000 Phaseolus vulgaris HOM05D006934 ORTHO05D008743 1.7e-211 739.6 490 72.4
Glyma.04G060900 Glycine max HOM05D006934 ORTHO05D008743 2.2e-211 739.2 503 71.2
ATR0739G024 Amborella trichopoda HOM05D006934 ORTHO05D008743 3.7e-211 738.4 504 69.8
arahy.Tifrunner.gnm1.ann1.XZ9AUI Arachis hypogaea HOM05D006934 ORTHO05D008743 2.4e-210 735.7 507 70.2
Eucgr.C02526 Eucalyptus grandis HOM05D006934 ORTHO05D008743 2.4e-210 735.7 479 74.3
Gorai.001G038100 Gossypium raimondii HOM05D006934 ORTHO05D008743 2.4e-210 735.7 512 68.9
Gohir.D07G036200 Gossypium hirsutum HOM05D006934 ORTHO05D008743 5.4e-210 734.6 512 68.9
PGSC0003DMG400029048 Solanum tuberosum HOM05D006934 ORTHO05D008743 5.0e-208 728.0 474 73.8
CDE02G1998 Ceratophyllum demersum HOM05D006934 ORTHO05D008743 9.5e-207 723.8 490 69.6
Hund02990 Selenicereus undatus HOM05D006934 ORTHO05D008743 1.2e-206 723.4 514 69.3
Nitab4.5_0000406g0060 Nicotiana tabacum HOM05D006934 ORTHO05D008743 1.4e-205 719.9 498 70.5
Sp2g22420 Schrenkiella parvula HOM05D006934 ORTHO05D008743 2.3e-205 719.2 513 68.0
BcaNung03200 Brassica carinata HOM05D006934 ORTHO05D008743 4.0e-205 718.4 504 69.8
BraA06t26511Z Brassica rapa HOM05D006934 ORTHO05D008743 8.9e-205 717.2 509 68.6
C07p42720 Brassica napus HOM05D006934 ORTHO05D008743 5.7e-204 714.5 485 70.3
BcaNung02296 Brassica carinata HOM05D006934 ORTHO05D008743 7.5e-204 714.1 485 70.1
BolC7t44802H Brassica oleracea HOM05D006934 ORTHO05D008743 7.5e-204 714.1 485 70.1
PSO017G3817 Papaver somniferum HOM05D006934 ORTHO05D008743 2.9e-203 712.2 503 68.6
Sed0006653 Sechium edule HOM05D006934 ORTHO05D008743 3.7e-203 711.8 495 67.7
AL6G36750 Arabidopsis lyrata HOM05D006934 ORTHO05D008743 1.4e-202 709.9 498 68.7
Lj7C734G21 Lonicera japonica HOM05D006934 ORTHO05D008743 2.4e-202 709.1 456 74.1
Gorai.010G118800 Gossypium raimondii HOM05D006934 ORTHO05D008743 5.4e-202 708.0 512 67.2
Gohir.D06G103800 Gossypium hirsutum HOM05D006934 ORTHO05D008743 7.0e-202 707.6 512 67.2
THA.LOC104799020 Tarenaya hassleriana HOM05D006934 ORTHO05D008743 7.8e-201 704.1 528 66.3
MELO3C016958.2 Cucumis melo HOM05D006934 ORTHO05D008743 1.7e-200 703.0 495 68.1
CsaV3_4G036540 Cucumis sativus L. HOM05D006934 ORTHO05D008743 5.0e-200 701.4 489 68.3
PSO170G6733 Papaver somniferum HOM05D006934 ORTHO05D008743 8.6e-200 700.7 503 67.6
unitig_32.g11664 Utricularia gibba HOM05D006934 ORTHO05D008743 8.6e-200 700.7 488 69.7
Ah.12g060980 Amaranthus hybridus HOM05D006934 ORTHO05D008743 1.1e-199 700.3 462 74.0
HPP92_004696 Vanilla planifolia HOM05D006934 ORTHO05D008743 2.1e-198 696.0 504 67.7
ClCG05G016280 Citrullus lanatus HOM05D006934 ORTHO05D008743 1.0e-197 693.7 515 65.6
Aa31LG11G4330 Aethionema arabicum HOM05D006934 ORTHO05D008743 4.0e-197 691.8 508 66.9
Os06g0649900 Oryza sativa ssp. japonica HOM05D006934 ORTHO05D008743 8.9e-197 690.6 480 66.9
A06p35860 Brassica napus HOM05D006934 ORTHO05D008743 7.5e-196 687.6 556 62.8
Aqoxy2G03820 Aquilegia oxysepala HOM05D006934 ORTHO05D008743 6.6e-192 674.5 509 63.5
Nn2g12390 Nelumbo nucifera HOM05D006934 ORTHO05D008743 9.9e-188 660.6 489 67.1
BcaNung06716 Brassica carinata HOM05D006934 ORTHO05D008743 2.9e-187 659.1 485 67.0
SEGI_09290 Sequoiadendron giganteum HOM05D006934 ORTHO05D008743 1.1e-186 657.1 493 63.9
arahy.Tifrunner.gnm1.ann1.G1SIKM Arachis hypogaea HOM05D006934 ORTHO05D008743 2.9e-171 605.9 507 61.1
Pp3c3_35450 Physcomitrium patens HOM05D006934 ORTHO05D008743 3.4e-164 582.4 514 54.5
Thhalv10004366m.g Eutrema salsugineum HOM05D006934 ORTHO05D008743 1.3e-158 563.9 384 70.8
CARHR188390 Cardamine hirsuta HOM05D006934 ORTHO05D008743 3.7e-150 535.8 376 69.9
Peaxi162Scf00822g00212 Petunia axillaris HOM05D006934 ORTHO05D008743 3.5e-145 519.2 358 68.2
Sc09g0010640 Simmondsia chinensis HOM05D006934 ORTHO05D008743 7.9e-137 491.5 365 66.3
Nn8g39897 Nelumbo nucifera HOM05D006934 ORTHO05D008743 3.8e-131 472.6 333 66.7
Eucgr.C02635 Eucalyptus grandis HOM05D006934 ORTHO05D008743 1.5e-119 434.1 498 49.8
Gohir.A07G032950 Gossypium hirsutum HOM05D006934 ORTHO05D008743 8.5e-115 418.3 309 64.4
Gohir.A06G101800 Gossypium hirsutum HOM05D006934 ORTHO05D008743 2.3e-112 410.2 314 62.7
Zm00001eb275030 Zea mays HOM05D006934 ORTHO05D008743 7.3e-90 335.5 238 61.8
Zm00001eb334470 Zea mays HOM05D006934 ORTHO05D008743 4.3e-82 309.7 213 62.9
QL02p018870 Quercus lobata HOM05D006934 ORTHO05D008743 4.7e-73 279.6 185 70.8
Gohir.A06G101702 Gossypium hirsutum HOM05D006934 ORTHO05D008743 3.3e-66 256.9 179 70.9
SGA_v2.0_scaffold22G09909 Striga asiatica HOM05D006934 ORTHO05D008743 1.2e-57 228.4 150 75.3
Zm00001eb337170 Zea mays HOM05D006934 ORTHO05D008743 7.6e-55 219.2 148 63.5
Lsat_1_v5_gn_5_171641 Lactuca sativa HOM05D006934 ORTHO05D008743 3.8e-22 110.5 121 53.7
Cfa012861 Carpinus fangiana HOM05D006934 ORTHO05D008743 1.8e-16 91.7 53 75.5
Lsat_1_v5_gn_2_108800 Lactuca sativa HOM05D006934 ORTHO05D003550 1.4e-13 82.0 79 51.9
SEGI_28803 Sequoiadendron giganteum HOM05D006934 ORTHO05D008743 9.7e-10 69.3 78 44.9


User provided reference genes

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