Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN27G3009 Fragaria x ananassa HOM05D006600 ORTHO05D008446 1.2e-159 566.6 329 100.0
FAN15G1504 Fragaria x ananassa HOM05D006600 ORTHO05D008446 2.2e-156 555.8 329 97.0
FAN20G2273 Fragaria x ananassa HOM05D006600 ORTHO05D008446 1.4e-155 553.1 329 89.7
FvH4_2g33350 Fragaria vesca HOM05D006600 ORTHO05D008446 4.1e-155 551.6 329 96.0
FAN24G1058 Fragaria x ananassa HOM05D006600 ORTHO05D008446 5.9e-154 547.7 329 95.7
RcHm_v2.0_Chr6g0309231 Rosa chinensis HOM05D006600 ORTHO05D008446 4.5e-146 521.5 329 91.8
Lj1g0008642 Lotus japonicus HOM05D006600 ORTHO05D008446 6.2e-127 458.0 328 81.7
Prupe.1G425800 Prunus persica HOM05D006600 ORTHO05D008446 8.9e-126 454.1 325 81.8
MD08G1088100 Malus domestica HOM05D006600 ORTHO05D008446 1.3e-124 450.3 327 81.7
arahy.Tifrunner.gnm1.ann1.UTGV4K Arachis hypogaea HOM05D006600 ORTHO05D008446 2.9e-124 449.1 325 81.2
CiPaw.08G048500 Carya illinoinensis HOM05D006600 ORTHO05D008446 1.1e-123 447.2 330 64.8
VMungo1309G2568 Vigna mungo HOM05D006600 ORTHO05D008446 2.4e-123 446.0 329 79.6
Glyma.06G045000 Glycine max HOM05D006600 ORTHO05D008446 3.2e-123 445.7 329 79.3
QL12p037547 Quercus lobata HOM05D006600 ORTHO05D008446 3.2e-123 445.7 326 64.4
arahy.Tifrunner.gnm1.ann1.H62KW4 Arachis hypogaea HOM05D006600 ORTHO05D008446 7.1e-123 444.5 325 80.9
Phvul.009G070400 Phaseolus vulgaris HOM05D006600 ORTHO05D008446 7.1e-123 444.5 329 79.3
Gorai.009G217900 Gossypium raimondii HOM05D006600 ORTHO05D008446 3.5e-122 442.2 329 77.5
Gohir.D05G211400 Gossypium hirsutum HOM05D006600 ORTHO05D008446 6.0e-122 441.4 329 77.5
Lalb_Chr23g0267431 Lupinus albus HOM05D006600 ORTHO05D008446 1.0e-121 440.7 329 79.3
THA.LOC104807092 Tarenaya hassleriana HOM05D006600 ORTHO05D008446 1.3e-121 440.3 327 63.6
TWI56G0382 Tripterygium wilfordii HOM05D006600 ORTHO05D008446 3.9e-121 438.7 329 77.2
Rhsim07G0222000 Rhododendron simsii HOM05D006600 ORTHO05D008446 8.6e-121 437.6 325 76.0
Gohir.A05G207900 Gossypium hirsutum HOM05D006600 ORTHO05D008446 1.5e-120 436.8 329 77.2
Cfa013668 Carpinus fangiana HOM05D006600 ORTHO05D008446 1.9e-120 436.4 325 77.8
Lsat_1_v5_gn_6_112481 Lactuca sativa HOM05D006600 ORTHO05D008446 1.9e-120 436.4 322 78.6
Thecc.08G092000 Theobroma cacao HOM05D006600 ORTHO05D008446 2.5e-120 436.0 329 67.5
Glyma.04G044500 Glycine max HOM05D006600 ORTHO05D008446 4.3e-120 435.3 329 62.6
Ca_15912_v3 Cicer arietinum L. HOM05D006600 ORTHO05D008446 9.5e-120 434.1 329 74.8
Medtr3g102800 Medicago truncatula HOM05D006600 ORTHO05D008446 1.2e-119 433.7 329 63.8
Atru.chr13.803 Acer truncatum HOM05D006600 ORTHO05D008446 1.6e-119 433.3 329 76.9
PGR083G0558 Punica granatum HOM05D006600 ORTHO05D008446 2.8e-119 432.6 322 77.6
Solyc04g078120.3 Solanum lycopersicum HOM05D006600 ORTHO05D008446 2.8e-119 432.6 325 66.2
vmacro04585 Vaccinium macrocarpon HOM05D006600 ORTHO05D008446 2.8e-119 432.6 325 78.8
ClCG08G016350 Citrullus lanatus HOM05D006600 ORTHO05D008446 3.6e-119 432.2 322 78.9
Sabra14G0012400 Salix brachista HOM05D006600 ORTHO05D008446 3.6e-119 432.2 320 62.2
Dinv44978 Davidia involucrata HOM05D006600 ORTHO05D008446 6.2e-119 431.4 327 78.0
Peaxi162Scf00081g00125 Petunia axillaris HOM05D006600 ORTHO05D008446 8.1e-119 431.0 322 78.0
Psat5g038240 Pisum sativum HOM05D006600 ORTHO05D008446 1.1e-118 430.6 329 63.2
Cc10_g05550 Coffea canephora HOM05D006600 ORTHO05D008446 1.4e-118 430.3 322 79.2
Sopen04g031730 Solanum pennellii HOM05D006600 ORTHO05D008446 1.4e-118 430.3 325 64.3
Ciclev10001599m.g Citrus clementina HOM05D006600 ORTHO05D008446 2.4e-118 429.5 329 76.3
PGSC0003DMG400021533 Solanum tuberosum HOM05D006600 ORTHO05D008446 2.4e-118 429.5 325 74.2
Sed0004073 Sechium edule HOM05D006600 ORTHO05D008446 3.1e-118 429.1 327 77.7
TPR.G33718 Trifolium pratense HOM05D006600 ORTHO05D008446 4.0e-118 428.7 327 63.0
TAR625G0631 Trochodendron aralioides HOM05D006600 ORTHO05D008446 5.2e-118 428.3 322 78.3
Oeu050861.1 Olea europaea HOM05D006600 ORTHO05D008446 8.9e-118 427.6 329 64.1
HanXRQChr10g0304021 Helianthus annuus HOM05D006600 ORTHO05D008446 1.2e-117 427.2 328 61.9
CSS0036700 Camellia sinensis var. sinensis HOM05D006600 ORTHO05D008446 1.5e-117 426.8 322 77.3
PSO541G2868 Papaver somniferum HOM05D006600 ORTHO05D008446 1.5e-117 426.8 327 69.4
Nitab4.5_0000934g0020 Nicotiana tabacum HOM05D006600 ORTHO05D008446 3.4e-117 425.6 322 62.1
PSO675G8764 Papaver somniferum HOM05D006600 ORTHO05D008446 3.4e-117 425.6 327 62.1
CsaV3_2G026260 Cucumis sativus L. HOM05D006600 ORTHO05D008446 5.8e-117 424.9 322 77.3
MELO3C010818.2 Cucumis melo HOM05D006600 ORTHO05D008446 9.9e-117 424.1 322 78.6
Nitab4.5_0003228g0070 Nicotiana tabacum HOM05D006600 ORTHO05D008446 1.7e-116 423.3 322 62.7
Migut.C00501 Erythranthe guttata HOM05D006600 ORTHO05D008446 2.2e-116 422.9 322 76.4
Eucgr.F00122 Eucalyptus grandis HOM05D006600 ORTHO05D008446 2.9e-116 422.5 327 76.8
CANSAT35G1599 Cannabis sativa HOM05D006600 ORTHO05D008446 4.9e-116 421.8 322 79.2
Manes.18G044200 Manihot esculenta HOM05D006600 ORTHO05D008446 6.4e-116 421.4 322 61.8
Actinidia38095 Actinidia chinensis HOM05D006600 ORTHO05D008446 8.4e-116 421.0 321 76.6
Ah.15g092540 Amaranthus hybridus HOM05D006600 ORTHO05D008446 3.2e-115 419.1 328 59.5
MSTRG.1040 Avicennia marina HOM05D006600 ORTHO05D008446 5.4e-115 418.3 322 72.0
Aqoxy6G02751 Aquilegia oxysepala HOM05D006600 ORTHO05D008446 7.1e-115 417.9 330 77.0
Haze_22302 Corylus avellana HOM05D006600 ORTHO05D008446 2.7e-114 416.0 325 73.8
SalBow7G4697 Salvia bowleyana HOM05D006600 ORTHO05D008446 2.7e-114 416.0 328 74.7
Cpa.g.sc21.115 Carica papaya HOM05D006600 ORTHO05D008446 4.6e-114 415.2 236 78.4
Carub.0008s2674 Capsella rubella HOM05D006600 ORTHO05D008446 3.9e-113 412.1 321 74.5
DCAR_020080 Daucus carota HOM05D006600 ORTHO05D008446 6.6e-113 411.4 318 75.2
AT5G65860 Arabidopsis thaliana HOM05D006600 ORTHO05D008446 1.5e-112 410.2 322 68.3
CDE04G0491 Ceratophyllum demersum HOM05D006600 ORTHO05D008446 2.5e-112 409.5 325 60.9
Sp2g28940 Schrenkiella parvula HOM05D006600 ORTHO05D008446 4.3e-112 408.7 325 74.8
AUR62038783 Chenopodium quinoa HOM05D006600 ORTHO05D008446 5.6e-112 408.3 327 59.3
MBI16_g13383_MAGBIO Magnolia biondii HOM05D006600 ORTHO05D008446 5.6e-112 408.3 323 60.7
GSVIVG01009372001 Vitis vinifera HOM05D006600 ORTHO05D008446 7.3e-112 407.9 236 76.3
unitig_62.g23648 Utricularia gibba HOM05D006600 ORTHO05D008446 2.1e-111 406.4 321 59.5
Hma1.2p1_0923F.1_g236990 Hydrangea macrophylla HOM05D006600 ORTHO05D008446 2.8e-111 406.0 323 76.2
CARHR279850 Cardamine hirsuta HOM05D006600 ORTHO05D008446 3.6e-111 405.6 328 72.6
Lj4A761T87 Lonicera japonica HOM05D006600 ORTHO05D008446 4.7e-111 405.2 236 75.8
AUR62037454 Chenopodium quinoa HOM05D006600 ORTHO05D008446 1.4e-110 403.7 327 59.0
Thhalv10005718m.g Eutrema salsugineum HOM05D006600 ORTHO05D008446 1.4e-110 403.7 325 64.3
BolC3t18247H Brassica oleracea HOM05D006600 ORTHO05D008446 1.8e-110 403.3 320 59.7
BcaB02g09901 Brassica carinata HOM05D006600 ORTHO05D008446 9.0e-110 401.0 325 58.8
C03p59830 Brassica napus HOM05D006600 ORTHO05D008446 1.2e-109 400.6 320 59.7
SGA_v2.0_scaffold244G44349 Striga asiatica HOM05D006600 ORTHO05D008446 1.2e-109 400.6 322 58.4
CAN.G1054.24 Capsicum annuum HOM05D006600 ORTHO05D008446 1.5e-109 400.2 236 74.2
BraA06t26199Z Brassica rapa HOM05D006600 ORTHO05D008446 2.6e-109 399.4 325 58.8
A06p32700 Brassica napus HOM05D006600 ORTHO05D008446 3.4e-109 399.1 325 58.8
EL10As7g23812 Beta vulgaris HOM05D006600 ORTHO05D008446 1.3e-108 397.1 371 53.1
ATR0030G048 Amborella trichopoda HOM05D006600 ORTHO05D008446 2.2e-108 396.4 331 71.9
BcaC01g02830 Brassica carinata HOM05D006600 ORTHO05D008446 1.9e-104 383.3 234 72.6
Zm00001eb214310 Zea mays HOM05D006600 ORTHO05D008446 2.1e-103 379.8 322 56.8
SEGI_28402 Sequoiadendron giganteum HOM05D006600 ORTHO05D008446 6.2e-103 378.3 317 72.9
HPP92_018760 Vanilla planifolia HOM05D006600 ORTHO05D008446 3.4e-101 372.5 319 56.7
Os03g0761200 Oryza sativa ssp. japonica HOM05D006600 ORTHO05D008446 4.5e-101 372.1 322 55.9
Aa31LG1G16240 Aethionema arabicum HOM05D006600 ORTHO05D008446 9.9e-101 370.9 310 71.6
COL.COLO4_28538 Corchorus olitorius HOM05D006600 ORTHO05D008446 1.8e-94 350.1 335 52.2
SMO228G0045 Selaginella moellendorffii HOM05D006600 ORTHO05D008446 6.9e-94 348.2 323 51.7
AagrBONN_evm.TU.Sc2ySwM_228.1907 Anthoceros agrestis HOM05D006600 ORTHO05D008446 1.1e-91 340.9 237 63.3
Nn1g04625 Nelumbo nucifera HOM05D006600 ORTHO05D008446 1.1e-91 340.9 327 67.6
Mapoly0063s0069 Marchantia polymorpha HOM05D006600 ORTHO05D008446 2.3e-89 333.2 321 65.4
Potri.014G019000 Populus trichocarpa HOM05D006600 ORTHO05D008446 2.9e-84 316.2 257 77.0
Duzib093G2027 Durio zibethinus HOM05D006600 ORTHO05D008446 6.7e-81 305.1 259 56.0
ECA246G2737 Erigeron canadensis HOM05D006600 ORTHO05D008446 3.3e-80 302.8 261 73.2
Hma1.2p1_0923F.1_g236980 Hydrangea macrophylla HOM05D006600 ORTHO05D008446 2.6e-77 293.1 276 72.1
COL.COLO4_28541 Corchorus olitorius HOM05D006600 ORTHO05D008446 1.1e-72 277.7 249 55.0
Sc26g0004110 Simmondsia chinensis HOM05D006600 ORTHO05D008446 5.9e-69 265.4 247 73.3
AL8G43570 Arabidopsis lyrata HOM05D006600 ORTHO05D008446 8.5e-68 261.5 250 70.0
Cre01.g050050 Chlamydomonas reinhardtii HOM05D006600 ORTHO05D008446 2.0e-64 250.4 379 35.4
MD15G1072900 Malus domestica HOM05D006600 ORTHO05D008446 4.4e-64 249.2 191 64.9
Pp3c17_19880 Physcomitrium patens HOM05D006600 ORTHO05D008446 1.3e-60 237.7 245 66.5
MCO09G534 Micromonas commoda HOM05D006600 ORTHO05D008446 1.2e-58 231.1 328 44.2
CBR_g40512 Chara braunii HOM05D000409 ORTHO05D000184 8.8e-57 224.9 189 54.5
BcaC01g02829 Brassica carinata HOM05D006600 ORTHO05D008446 3.7e-55 219.5 227 49.8
TAR624G0301 Trochodendron aralioides HOM05D006600 ORTHO05D008446 4.4e-48 196.1 138 63.8
CDE07G1425 Ceratophyllum demersum HOM05D006600 ORTHO05D008446 1.8e-46 190.7 124 65.3
TAR374G0485 Trochodendron aralioides HOM05D000474 ORTHO05D003648 1.0e-41 174.9 126 61.1
Actinidia08258 Actinidia chinensis HOM05D006600 ORTHO05D008446 1.4e-33 147.9 94 67.0
MBI16_g35586_MAGBIO Magnolia biondii HOM05D006600 ORTHO05D001493 1.3e-15 88.2 83 51.8
Oeu040380.1 Olea europaea HOM05D006600 ORTHO05D008446 2.3e-12 77.4 87 48.3
Dinv39240 Davidia involucrata HOM05D006600 ORTHO05D008446 1.7e-07 61.2 97 40.2


User provided reference genes

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