Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN27G2967 Fragaria x ananassa HOM05D007827 ORTHO05D009749 1.4e-79 299.7 165 100.0
FAN24G3029 Fragaria x ananassa HOM05D007827 ORTHO05D009749 1.5e-73 279.6 165 91.5
FvH4_2g31620 Fragaria vesca HOM05D007827 ORTHO05D009749 1.8e-71 272.7 165 90.9
FAN15G3566 Fragaria x ananassa HOM05D007827 ORTHO05D009749 3.1e-71 271.9 164 90.2
RcHm_v2.0_Chr6g0311201 Rosa chinensis HOM05D007827 ORTHO05D009749 3.7e-48 195.3 166 69.3
MD15G1056900 Malus domestica HOM05D007827 ORTHO05D009749 2.4e-26 122.9 161 52.2
Prupe.1G409500 Prunus persica HOM05D007827 ORTHO05D009749 1.4e-23 113.6 156 51.9
CiPaw.16G027300 Carya illinoinensis HOM05D007827 ORTHO05D009749 1.9e-15 86.7 158 39.2
QL02p000760 Quercus lobata HOM05D007827 ORTHO05D009749 3.2e-15 85.9 137 43.1
Sabra06G0174900 Salix brachista HOM05D007827 ORTHO05D009749 1.6e-14 83.6 141 41.8
Medtr1g015840 Medicago truncatula HOM05D007827 ORTHO05D009749 3.5e-14 82.4 137 40.9
Haze_18158 Corylus avellana HOM05D007827 ORTHO05D009749 4.6e-14 82.0 138 42.0
Potri.006G226200 Populus trichocarpa HOM05D007827 ORTHO05D009749 1.0e-13 80.9 141 41.1
TPR.G13014 Trifolium pratense HOM05D007827 ORTHO05D009749 1.3e-13 80.5 142 38.0
Lj5g0025960 Lotus japonicus HOM05D007827 ORTHO05D009749 1.8e-13 80.1 142 39.4
ClCG08G010040 Citrullus lanatus HOM05D007827 ORTHO05D009749 3.9e-13 79.0 158 40.5
Lalb_Chr23g0267841 Lupinus albus HOM05D007827 ORTHO05D009749 8.7e-13 77.8 162 37.0
Psat6g021400 Pisum sativum HOM05D007827 ORTHO05D009749 1.5e-12 77.0 162 37.7
Glyma.04G052400 Glycine max HOM05D007827 ORTHO05D009749 9.6e-12 74.3 136 39.0
Medtr3g104620 Medicago truncatula HOM05D007827 ORTHO05D009749 2.8e-11 72.8 165 36.4
Peaxi162Scf00297g00062 Petunia axillaris HOM05D007827 ORTHO05D009749 4.8e-11 72.0 164 32.9
Psat5g036160 Pisum sativum HOM05D007827 ORTHO05D009749 6.2e-11 71.6 164 35.4
MELO3C011460.2 Cucumis melo HOM05D007827 ORTHO05D009749 1.4e-10 70.5 158 38.0
Dinv28003 Davidia involucrata HOM05D007827 ORTHO05D009749 1.4e-10 70.5 100 47.0
Lj1g0018619 Lotus japonicus HOM05D007827 ORTHO05D009749 3.1e-10 69.3 164 38.4
Solyc08g062840.1 Solanum lycopersicum HOM05D007827 ORTHO05D009749 3.1e-10 69.3 170 30.0
Sopen08g018370 Solanum pennellii HOM05D007827 ORTHO05D009749 3.1e-10 69.3 170 30.0
Thecc.09G056900 Theobroma cacao HOM05D007827 ORTHO05D009749 3.1e-10 69.3 104 44.2
Cc08_g10870 Coffea canephora HOM05D007827 ORTHO05D009749 4.0e-10 68.9 143 36.4
CsaV3_6G032200 Cucumis sativus L. HOM05D007827 ORTHO05D009749 4.0e-10 68.9 165 37.0
Cpa.g.sc7.157 Carica papaya HOM05D007827 ORTHO05D009749 1.2e-09 67.4 135 38.5
Sed0014394 Sechium edule HOM05D007827 ORTHO05D009749 1.2e-09 67.4 139 38.1
PGSC0003DMG400008199 Solanum tuberosum HOM05D007827 ORTHO05D009749 1.5e-09 67.0 170 29.4
Migut.A00115 Erythranthe guttata HOM05D007827 ORTHO05D009749 4.5e-09 65.5 42 71.4
Manes.16G082000 Manihot esculenta HOM05D007827 ORTHO05D009749 5.8e-09 65.1 136 37.5
Rhsim11G0042400 Rhododendron simsii HOM05D007827 ORTHO05D009749 5.8e-09 65.1 97 41.2
Sed0025262 Sechium edule HOM05D007827 ORTHO05D009749 7.6e-09 64.7 139 38.1
CSS0004361 Camellia sinensis var. sinensis HOM05D007827 ORTHO05D009749 1.0e-08 64.3 136 36.0
Phvul.009G078700 Phaseolus vulgaris HOM05D007827 ORTHO05D009749 2.2e-08 63.2 162 35.2
VMungo1309G0458 Vigna mungo HOM05D007827 ORTHO05D009749 2.2e-08 63.2 136 37.5
Glyma.14G097100 Glycine max HOM05D007827 ORTHO05D009749 4.9e-08 62.0 157 34.4
Hma1.2p1_0801F.1_g220250 Hydrangea macrophylla HOM05D007827 ORTHO05D009749 8.4e-08 61.2 44 63.6
Hma1.2p1_1933F.1_g308040 Hydrangea macrophylla HOM05D007827 ORTHO05D009749 8.4e-08 61.2 44 63.6
Oeu018628.1 Olea europaea HOM05D007827 ORTHO05D009749 8.4e-08 61.2 44 63.6
TPR.G3528 Trifolium pratense HOM05D007827 ORTHO05D009749 8.4e-08 61.2 181 30.4
Nitab4.5_0002039g0090 Nicotiana tabacum HOM05D007827 ORTHO05D009749 1.1e-07 60.8 136 32.4
Solyc06g011440.1 Solanum lycopersicum HOM05D007827 ORTHO05D009749 1.4e-07 60.5 163 32.5
SGA_v2.0_scaffold20G09207 Striga asiatica HOM05D007827 ORTHO05D009749 1.4e-07 60.5 106 38.7
Nitab4.5_0007037g0010 Nicotiana tabacum HOM05D007827 ORTHO05D009749 1.9e-07 60.1 171 28.7
Actinidia01227 Actinidia chinensis HOM05D007827 ORTHO05D009749 2.5e-07 59.7 135 34.1
Nitab4.5_0000972g0020 Nicotiana tabacum HOM05D007827 ORTHO05D009749 2.5e-07 59.7 153 29.4
Oeu047101.1 Olea europaea HOM05D007827 ORTHO05D009749 2.5e-07 59.7 60 50.0
CSS0031213 Camellia sinensis var. sinensis HOM05D007827 ORTHO05D009749 3.2e-07 59.3 135 36.3
unitig_37.g12945 Utricularia gibba HOM05D007827 ORTHO05D009749 3.2e-07 59.3 74 45.9
Atru.chr7.1942 Acer truncatum HOM05D007827 ORTHO05D009749 4.2e-07 58.9 44 65.9
Nitab4.5_0007177g0010 Nicotiana tabacum HOM05D007827 ORTHO05D009749 4.2e-07 58.9 153 30.1
CAN.G130.10 Capsicum annuum HOM05D007827 ORTHO05D009749 5.5e-07 58.5 167 29.9
Sopen06g006480 Solanum pennellii HOM05D007827 ORTHO05D009749 5.5e-07 58.5 163 31.9
SalBow4G1896 Salvia bowleyana HOM05D007827 ORTHO05D009749 7.1e-07 58.2 137 33.6
PGSC0003DMG400029878 Solanum tuberosum HOM05D007827 ORTHO05D009749 1.6e-06 57.0 47 57.4
arahy.Tifrunner.gnm1.ann1.WVJ8VS Arachis hypogaea HOM05D007827 ORTHO05D009749 2.1e-06 56.6 138 34.1
SGA_v2.0_scaffold169G38700 Striga asiatica HOM05D007827 ORTHO05D009749 2.7e-06 56.2 41 58.5
TAR626G1076 Trochodendron aralioides HOM05D007827 ORTHO05D009749 3.5e-06 55.8 110 36.4
Aqoxy7G01166 Aquilegia oxysepala HOM05D007827 ORTHO05D009749 4.6e-06 55.5 45 57.8
arahy.Tifrunner.gnm1.ann1.S72ULK Arachis hypogaea HOM05D007827 ORTHO05D009749 4.6e-06 55.5 138 31.9
CSS0026056 Camellia sinensis var. sinensis HOM05D007827 ORTHO05D009749 6.0e-06 55.1 42 61.9
Lsat_1_v5_gn_6_13921 Lactuca sativa HOM05D007827 ORTHO05D009749 7.9e-06 54.7 75 42.7


User provided reference genes

Program Settings