Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN27G2872 Fragaria x ananassa HOM05D005054 ORTHO05D005948 1.3e-111 406.4 208 100.0
FAN15G2263 Fragaria x ananassa HOM05D002641 ORTHO05D005948 9.7e-110 400.2 208 98.1
FAN20G0036 Fragaria x ananassa HOM05D005054 ORTHO05D005948 2.2e-109 399.1 208 98.1
FAN24G3113 Fragaria x ananassa HOM05D005054 ORTHO05D005948 3.4e-107 391.7 208 96.6
FvH4_2g28770 Fragaria vesca HOM05D005054 ORTHO05D005948 6.5e-106 387.5 208 95.2
RcHm_v2.0_Chr6g0297531 Rosa chinensis HOM05D005054 ORTHO05D005948 1.1e-97 360.1 208 87.5
Prupe.1G483600 Prunus persica HOM05D005054 ORTHO05D005948 3.8e-82 308.5 207 77.8
MD15G1128300 Malus domestica HOM05D005054 ORTHO05D005948 6.5e-82 307.8 208 78.8
MD08G1157200 Malus domestica HOM05D005054 ORTHO05D005948 4.2e-81 305.1 208 78.4
CANSAT78G0154 Cannabis sativa HOM05D005054 ORTHO05D005948 1.6e-80 303.1 207 75.8
Dinv18198 Davidia involucrata HOM05D005054 ORTHO05D005948 3.0e-79 298.9 210 77.1
CiPaw.08G009700 Carya illinoinensis HOM05D005054 ORTHO05D005948 6.7e-79 297.7 206 76.2
Potri.018G024600 Populus trichocarpa HOM05D005054 ORTHO05D005948 6.7e-79 297.7 211 73.9
Potri.006G257100 Populus trichocarpa HOM05D005054 ORTHO05D005948 1.2e-78 297.0 212 73.1
GSVIVG01035953001 Vitis vinifera HOM05D005054 ORTHO05D005948 5.7e-78 294.7 211 71.6
TWI32G1290 Tripterygium wilfordii HOM05D005054 ORTHO05D005948 9.7e-78 293.9 211 73.5
TPR.G3145 Trifolium pratense HOM05D005054 ORTHO05D005948 1.8e-76 289.7 203 73.9
Medtr3g106570 Medicago truncatula HOM05D005054 ORTHO05D005948 4.1e-76 288.5 207 72.9
Haze_21489 Corylus avellana HOM05D005054 ORTHO05D005948 5.3e-76 288.1 205 70.7
Cpa.g.sc187.3 Carica papaya HOM05D005054 ORTHO05D005948 9.1e-76 287.3 208 71.6
Phvul.009G091300 Phaseolus vulgaris HOM05D005054 ORTHO05D005948 2.0e-75 286.2 207 72.9
Thecc.09G021500 Theobroma cacao HOM05D005054 ORTHO05D005948 2.7e-75 285.8 211 72.5
Manes.16G124300 Manihot esculenta HOM05D005054 ORTHO05D005948 5.9e-75 284.6 206 71.4
arahy.Tifrunner.gnm1.ann1.NJ6IKW Arachis hypogaea HOM05D005054 ORTHO05D005948 7.7e-75 284.3 205 75.1
CiPaw.07G225400 Carya illinoinensis HOM05D005054 ORTHO05D005948 7.7e-75 284.3 207 72.0
CSS0023128 Camellia sinensis var. sinensis HOM05D005054 ORTHO05D005948 1.0e-74 283.9 205 72.7
CSS0037696 Camellia sinensis var. sinensis HOM05D005054 ORTHO05D005948 1.0e-74 283.9 205 72.7
CSS0023723 Camellia sinensis var. sinensis HOM05D005054 ORTHO05D005948 1.3e-74 283.5 212 73.1
Ca_15755_v3 Cicer arietinum L. HOM05D005054 ORTHO05D005948 1.3e-74 283.5 207 70.5
Sed0027504 Sechium edule HOM05D005054 ORTHO05D005948 1.7e-74 283.1 201 72.1
HanXRQChr02g0050341 Helianthus annuus HOM05D005054 ORTHO05D005948 2.2e-74 282.7 205 72.7
Aqoxy7G03608 Aquilegia oxysepala HOM05D005054 ORTHO05D005948 3.8e-74 282.0 199 71.9
Glyma.04G065200 Glycine max HOM05D005054 ORTHO05D005948 3.8e-74 282.0 207 72.0
Glyma.06G066400 Glycine max HOM05D005054 ORTHO05D005948 3.8e-74 282.0 207 71.5
CSS0024153 Camellia sinensis var. sinensis HOM05D005054 ORTHO05D005948 5.0e-74 281.6 207 72.9
VMungo1309G0253 Vigna mungo HOM05D005054 ORTHO05D005948 8.5e-74 280.8 207 71.0
CsaV3_3G046210 Cucumis sativus L. HOM05D005054 ORTHO05D005948 1.1e-73 280.4 202 74.3
Nn2g12158 Nelumbo nucifera HOM05D005054 ORTHO05D005948 1.1e-73 280.4 208 69.7
MELO3C003718.2 Cucumis melo HOM05D005054 ORTHO05D005948 1.9e-73 279.6 202 73.8
Lalb_Chr08g0244231 Lupinus albus HOM05D005054 ORTHO05D005948 1.9e-73 279.6 206 72.8
PGR083G2649 Punica granatum HOM05D005054 ORTHO05D005948 1.9e-73 279.6 199 74.4
Actinidia14591 Actinidia chinensis HOM05D005054 ORTHO05D005948 3.2e-73 278.9 198 72.7
QL02p021123 Quercus lobata HOM05D005054 ORTHO05D005948 3.2e-73 278.9 203 71.4
Sabra18G0027000 Salix brachista HOM05D002641 ORTHO05D001537 4.2e-73 278.5 226 66.4
Duzib187G0432 Durio zibethinus HOM05D005054 ORTHO05D005948 1.2e-72 276.9 195 75.9
Gohir.A07G029500 Gossypium hirsutum HOM05D005054 ORTHO05D005948 2.1e-72 276.2 198 74.7
COL.COLO4_18886 Corchorus olitorius HOM05D002641 ORTHO05D001537 8.0e-72 274.2 189 75.1
Gorai.001G035100 Gossypium raimondii HOM05D005054 ORTHO05D005948 8.0e-72 274.2 198 74.2
Manes.03G012900 Manihot esculenta HOM05D005054 ORTHO05D005948 8.0e-72 274.2 206 67.0
Gohir.D07G033500 Gossypium hirsutum HOM05D005054 ORTHO05D005948 1.0e-71 273.9 198 74.2
ClCG05G016710 Citrullus lanatus HOM05D005054 ORTHO05D005948 1.4e-71 273.5 201 71.6
Lalb_Chr23g0268431 Lupinus albus HOM05D005054 ORTHO05D005948 1.4e-71 273.5 199 73.4
Sed0004415 Sechium edule HOM05D005054 ORTHO05D005948 1.4e-71 273.5 201 69.2
Psat5g031480 Pisum sativum HOM05D005054 ORTHO05D005948 3.0e-71 272.3 175 77.1
TAR625G0984 Trochodendron aralioides HOM05D005054 ORTHO05D005948 4.0e-71 271.9 195 70.8
Sc06g0000550 Simmondsia chinensis HOM05D005054 ORTHO05D005948 5.2e-71 271.6 206 70.9
Lj1g0015588 Lotus japonicus HOM05D005054 ORTHO05D005948 1.2e-70 270.4 207 69.1
Sopen08g012360 Solanum pennellii HOM05D005054 ORTHO05D005948 1.2e-70 270.4 201 71.1
HanXRQChr13g0403241 Helianthus annuus HOM05D005054 ORTHO05D005948 1.5e-70 270.0 208 70.7
PSO017G3131 Papaver somniferum HOM05D005054 ORTHO05D005948 2.0e-70 269.6 198 70.2
Gohir.D06G101400 Gossypium hirsutum HOM05D005054 ORTHO05D005948 2.6e-70 269.2 200 71.0
HPP92_000468 Vanilla planifolia HOM05D005054 ORTHO05D005948 2.6e-70 269.2 194 68.0
TAR626G0177 Trochodendron aralioides HOM05D005054 ORTHO05D005948 3.4e-70 268.9 202 70.3
Gohir.A06G099200 Gossypium hirsutum HOM05D005054 ORTHO05D005948 4.4e-70 268.5 202 70.3
Solyc08g041980.3 Solanum lycopersicum HOM05D005054 ORTHO05D005948 4.4e-70 268.5 201 70.6
Lsat_1_v5_gn_6_20280 Lactuca sativa HOM05D005054 ORTHO05D005948 9.8e-70 267.3 197 72.1
Gorai.010G116300 Gossypium raimondii HOM05D005054 ORTHO05D005948 1.7e-69 266.5 194 71.6
EL10Ac2g04185 Beta vulgaris HOM05D005054 ORTHO05D005948 2.2e-69 266.2 209 68.4
CAN.G9.14 Capsicum annuum HOM05D005054 ORTHO05D005948 4.8e-69 265.0 213 66.7
Nitab4.5_0003389g0010 Nicotiana tabacum HOM05D005054 ORTHO05D005948 4.8e-69 265.0 228 64.5
Ciclev10009464m.g Citrus clementina HOM05D005054 ORTHO05D005948 6.3e-69 264.6 209 69.4
PSO170G1976 Papaver somniferum HOM05D005054 ORTHO05D005948 8.3e-69 264.2 192 70.3
AT2G25310 Arabidopsis thaliana HOM05D005054 ORTHO05D005948 2.4e-68 262.7 203 68.5
AL4G16690 Arabidopsis lyrata HOM05D005054 ORTHO05D005948 4.1e-68 261.9 203 67.5
Cc08_g00410 Coffea canephora HOM05D005054 ORTHO05D005948 4.1e-68 261.9 197 69.5
ECA233G2586 Erigeron canadensis HOM05D005054 ORTHO05D005948 7.0e-68 261.2 202 70.3
Eucgr.C02743 Eucalyptus grandis HOM05D005054 ORTHO05D005948 7.0e-68 261.2 211 68.7
THA.LOC104803846 Tarenaya hassleriana HOM05D005054 ORTHO05D005948 1.6e-67 260.0 201 69.7
Carub.0004s0494 Capsella rubella HOM05D005054 ORTHO05D005948 2.7e-67 259.2 203 67.0
THA.LOC104803647 Tarenaya hassleriana HOM05D005054 ORTHO05D005948 1.3e-66 256.9 212 66.5
Sp4g04450 Schrenkiella parvula HOM05D005054 ORTHO05D005948 1.7e-66 256.5 203 67.0
Actinidia22328 Actinidia chinensis HOM05D005054 ORTHO05D005948 2.9e-66 255.8 196 69.9
ATR0767G140 Amborella trichopoda HOM05D005054 ORTHO05D005948 5.0e-66 255.0 195 68.2
BraA09t40971Z Brassica rapa HOM05D005054 ORTHO05D005948 8.6e-66 254.2 208 66.8
Actinidia33783 Actinidia chinensis HOM05D005054 ORTHO05D005948 1.1e-65 253.8 160 79.4
BcaC07g40871 Brassica carinata HOM05D005054 ORTHO05D005948 1.1e-65 253.8 208 66.8
Sopen06g024410 Solanum pennellii HOM05D005054 ORTHO05D005948 1.1e-65 253.8 198 68.2
A09p55700 Brassica napus HOM05D005054 ORTHO05D005948 1.5e-65 253.4 208 66.8
vmacro11190 Vaccinium macrocarpon HOM05D005054 ORTHO05D005948 1.9e-65 253.1 292 51.7
CARHR116210 Cardamine hirsuta HOM05D005054 ORTHO05D005948 3.3e-65 252.3 199 67.3
CAN.G1475.8 Capsicum annuum HOM05D005054 ORTHO05D005948 4.2e-65 251.9 201 65.7
Zm00001eb275230 Zea mays HOM05D005054 ORTHO05D005948 1.2e-64 250.4 205 64.4
Thhalv10000323m.g Eutrema salsugineum HOM05D005054 ORTHO05D005948 2.1e-64 249.6 203 66.0
BcaB08g35175 Brassica carinata HOM05D005054 ORTHO05D005948 2.8e-64 249.2 208 65.4
Solyc06g065930.4 Solanum lycopersicum HOM05D005054 ORTHO05D005948 2.8e-64 249.2 202 65.8
BolC1t00678H Brassica oleracea HOM05D005054 ORTHO05D005948 4.7e-64 248.4 208 62.5
Lj8A723T59 Lonicera japonica HOM05D005054 ORTHO05D005948 6.1e-64 248.1 162 77.2
BolC8t51440H Brassica oleracea HOM05D005054 ORTHO05D005948 1.0e-63 247.3 214 65.0
Hund25870 Selenicereus undatus HOM05D005054 ORTHO05D005948 1.4e-63 246.9 207 64.3
C08p38700 Brassica napus HOM05D005054 ORTHO05D005948 2.3e-63 246.1 214 64.5
BcaC09g52000 Brassica carinata HOM05D005054 ORTHO05D005948 3.0e-63 245.7 206 62.6
unitig_0.g694 Utricularia gibba HOM05D005054 ORTHO05D005948 3.0e-63 245.7 195 65.1
Carub.0007s0843 Capsella rubella HOM05D005054 ORTHO05D005948 8.9e-63 244.2 208 65.4
MSTRG.26017 Avicennia marina HOM05D005054 ORTHO05D005948 3.4e-62 242.3 177 72.3
Migut.A00022 Erythranthe guttata HOM05D005054 ORTHO05D005948 3.4e-62 242.3 199 65.3
Thhalv10026275m.g Eutrema salsugineum HOM05D005054 ORTHO05D005948 5.7e-62 241.5 195 65.1
Sp7g29920 Schrenkiella parvula HOM05D005054 ORTHO05D005948 5.7e-62 241.5 206 62.1
BcaNung03140 Brassica carinata HOM05D005054 ORTHO05D005948 3.7e-61 238.8 206 61.7
AUR62031549 Chenopodium quinoa HOM05D005054 ORTHO05D005948 4.9e-61 238.4 159 77.4
CARHR240040 Cardamine hirsuta HOM05D005054 ORTHO05D005948 6.3e-61 238.0 174 70.7
Rhsim02G0203400 Rhododendron simsii HOM05D005054 ORTHO05D005948 6.3e-61 238.0 202 63.9
AT4G32130 Arabidopsis thaliana HOM05D005054 ORTHO05D005948 1.4e-60 236.9 206 64.1
Nitab4.5_0000109g0420 Nicotiana tabacum HOM05D005054 ORTHO05D005948 1.8e-60 236.5 170 72.4
SalBow4G2693 Salvia bowleyana HOM05D005054 ORTHO05D005948 4.1e-60 235.3 198 62.6
AL7G19730 Arabidopsis lyrata HOM05D005054 ORTHO05D005948 9.2e-60 234.2 209 63.2
BraA01t00585Z Brassica rapa HOM05D005054 ORTHO05D005948 1.6e-59 233.4 172 68.6
Os06g0644100 Oryza sativa ssp. japonica HOM05D005054 ORTHO05D005948 4.5e-59 231.9 191 62.3
Atru.chr7.2466 Acer truncatum HOM05D002641 ORTHO05D001537 1.5e-57 226.9 164 72.0
CDE12G0076 Ceratophyllum demersum HOM05D005054 ORTHO05D005948 1.9e-57 226.5 189 65.6
AUR62012426 Chenopodium quinoa HOM05D005054 ORTHO05D005948 2.5e-57 226.1 208 63.0
Zm00001eb387020 Zea mays HOM05D005054 ORTHO05D005948 5.6e-57 224.9 175 65.7
CDE01G0036 Ceratophyllum demersum HOM05D005054 ORTHO05D005948 1.1e-52 210.7 189 63.0
arahy.Tifrunner.gnm1.ann1.49IL45 Arachis hypogaea HOM05D005054 ORTHO05D005948 4.6e-51 205.3 204 60.8
Nitab4.5_0005785g0040 Nicotiana tabacum HOM05D005054 ORTHO05D005948 5.6e-49 198.4 127 78.7
PGSC0003DMG400029900 Solanum tuberosum HOM05D005054 ORTHO05D005948 1.2e-48 197.2 128 78.1
Mapoly0003s0100 Marchantia polymorpha HOM05D005054 ORTHO05D005948 3.6e-48 195.7 183 56.8
Pp3c25_10780 Physcomitrium patens HOM05D005054 ORTHO05D005948 6.2e-48 194.9 187 55.1
MBI14_g36925_MAGBIO Magnolia biondii HOM05D005054 ORTHO05D005948 8.9e-47 191.0 121 78.5
Zm00001eb149990 Zea mays HOM05D005054 ORTHO05D005948 5.4e-44 181.8 117 76.9
DCAR_001545 Daucus carota HOM05D005054 ORTHO05D005948 4.6e-43 178.7 103 82.5
Nitab4.5_0000857g0140 Nicotiana tabacum HOM05D005054 ORTHO05D005948 3.9e-42 175.6 169 60.4
SGA_v2.0_scaffold64G21960 Striga asiatica HOM05D005054 ORTHO05D005948 3.3e-41 172.6 123 74.0
AagrBONN_evm.TU.Sc2ySwM_362.161 Anthoceros agrestis HOM05D005054 ORTHO05D005948 5.6e-41 171.8 158 55.7
HPP92_000478 Vanilla planifolia HOM05D005054 ORTHO05D005948 9.5e-41 171.0 174 53.4
Oeu024982.1 Olea europaea HOM05D005054 ORTHO05D005948 1.2e-40 170.6 110 80.0
arahy.Tifrunner.gnm1.ann1.M1LVA5 Arachis hypogaea HOM05D005054 ORTHO05D005948 8.1e-40 167.9 96 83.3
SMO354G0008 Selaginella moellendorffii HOM05D005054 ORTHO05D005948 8.9e-39 164.5 150 54.0
Actinidia14094 Actinidia chinensis HOM05D005054 ORTHO05D005948 2.4e-36 156.4 190 50.0
Peaxi162Scf00136g00153 Petunia axillaris HOM05D005054 ORTHO05D005948 9.2e-36 154.5 107 73.8
CBR_g24053 Chara braunii HOM05D005054 ORTHO05D005948 8.6e-34 147.9 158 49.4
SMO364G0469 Selaginella moellendorffii HOM05D005054 ORTHO05D005948 8.9e-31 137.9 149 47.0
Zm00001eb279560 Zea mays HOM05D005054 ORTHO05D005948 1.5e-30 137.1 103 70.9
CDE01G0528 Ceratophyllum demersum HOM05D005054 ORTHO05D005948 1.4e-28 130.6 168 48.2
FvH4_6g38550 Fragaria vesca HOM05D005054 ORTHO05D005948 2.3e-26 123.2 108 66.7
Zm00001eb412760 Zea mays HOM05D002563 ORTHO05D005948 1.3e-18 97.4 59 78.0
Zm00001eb260640 Zea mays HOM05D002563 ORTHO05D005948 1.5e-17 94.0 56 80.4
A01p06180 Brassica napus HOM05D000316 ORTHO05D001978 4.3e-17 92.4 70 62.9
MCO11G876 Micromonas commoda HOM05D005054 ORTHO05D005948 5.6e-17 92.0 147 38.8
C01p06810 Brassica napus HOM05D000316 ORTHO05D001978 1.6e-16 90.5 70 61.4
Cre07.g340650 Chlamydomonas reinhardtii HOM05D005054 ORTHO05D005948 6.2e-16 88.6 192 31.8
TPR.G18056 Trifolium pratense HOM05D005054 ORTHO05D005948 1.1e-12 77.8 62 67.7
Aa31LG2G17830 Aethionema arabicum HOM05D005054 ORTHO05D005948 1.6e-11 73.9 95 45.3
Nitab4.5_0006784g0020 Nicotiana tabacum HOM05D005054 ORTHO05D005948 4.6e-11 72.4 84 47.6
EL10Ac1g01779 Beta vulgaris HOM05D005054 ORTHO05D005948 1.5e-09 67.4 40 80.0
Zm00001eb260650 Zea mays HOM05D005054 ORTHO05D005948 4.3e-09 65.9 56 60.7
CSS0035454 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D015543 2.1e-08 63.5 38 76.3


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