Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN27G2831 Fragaria x ananassa HOM05D003443 ORTHO05D009887 2.3e-290 1001.5 496 100.0
FvH4_2g26511 Fragaria vesca HOM05D003443 ORTHO05D009887 8.2e-216 753.8 391 95.1
FAN15G1193 Fragaria x ananassa HOM05D002169 ORTHO05D006927 5.3e-215 751.1 391 94.9
RcHm_v2.0_Chr6g0295331 Rosa chinensis HOM05D003443 ORTHO05D009887 2.2e-197 692.6 392 87.8
Prupe.1G501800 Prunus persica HOM05D003443 ORTHO05D009887 1.5e-145 520.4 399 68.7
MD08G1168100 Malus domestica HOM05D003443 ORTHO05D009887 2.1e-139 500.0 397 65.5
Atru.chr13.1406 Acer truncatum HOM05D003443 ORTHO05D009887 1.1e-116 424.5 394 55.3
QL09p035320 Quercus lobata HOM05D003443 ORTHO05D009887 2.2e-112 410.2 398 55.0
QL09p036517 Quercus lobata HOM05D003443 ORTHO05D009887 8.5e-112 408.3 398 54.5
Cfa015987 Carpinus fangiana HOM05D003443 ORTHO05D009887 1.1e-108 397.9 384 54.9
Thecc.08G121100 Theobroma cacao HOM05D003443 ORTHO05D009887 2.2e-107 393.7 392 51.3
Manes.02G161000 Manihot esculenta HOM05D003443 ORTHO05D009887 1.2e-105 387.9 395 51.4
TAR628G0851 Trochodendron aralioides HOM05D003443 ORTHO05D009887 1.5e-105 387.5 397 52.1
Gohir.A05G233300 Gossypium hirsutum HOM05D003443 ORTHO05D009887 8.5e-104 381.7 398 50.0
CANSAT25G3703 Cannabis sativa HOM05D003443 ORTHO05D009887 4.2e-103 379.4 397 50.4
GSVIVG01008903001 Vitis vinifera HOM05D003443 ORTHO05D009887 4.6e-102 375.9 398 51.8
TWI56G0082 Tripterygium wilfordii HOM05D003443 ORTHO05D009887 6.7e-101 372.1 398 48.5
Gorai.009G244000 Gossypium raimondii HOM05D003443 ORTHO05D009887 1.5e-100 370.9 401 49.1
Psat2g078480 Pisum sativum HOM05D003443 ORTHO05D009887 2.4e-98 363.6 399 48.6
Sed0010337 Sechium edule HOM05D003443 ORTHO05D009887 1.2e-97 361.3 401 48.9
ClCG11G015590 Citrullus lanatus HOM05D003443 ORTHO05D009887 7.7e-97 358.6 399 48.6
Nn5g28161 Nelumbo nucifera HOM05D003443 ORTHO05D009887 7.7e-97 358.6 391 48.6
TPR.G8502 Trifolium pratense HOM05D003443 ORTHO05D009887 1.3e-96 357.8 400 48.8
Medtr5g059070 Medicago truncatula HOM05D003443 ORTHO05D009887 2.9e-96 356.7 402 48.0
Phvul.008G165600 Phaseolus vulgaris HOM05D003443 ORTHO05D009887 3.8e-96 356.3 396 48.7
Sabra05G0132100 Salix brachista HOM05D003443 ORTHO05D009887 1.1e-95 354.8 407 47.7
Ca_03725_v3 Cicer arietinum L. HOM05D003443 ORTHO05D009887 3.2e-95 353.2 396 48.2
VMungo0647G1328 Vigna mungo HOM05D003443 ORTHO05D009887 5.5e-95 352.4 386 48.7
Lj1g0008620 Lotus japonicus HOM05D003443 ORTHO05D009887 7.2e-95 352.1 391 48.1
CsaV3_4G028430 Cucumis sativus L. HOM05D003443 ORTHO05D009887 1.6e-94 350.9 393 48.3
Eucgr.F03767 Eucalyptus grandis HOM05D003443 ORTHO05D009887 1.4e-93 347.8 391 48.8
Glyma.14G162900 Glycine max HOM05D003443 ORTHO05D009887 3.0e-93 346.7 377 49.6
RhsimUnG0094800 Rhododendron simsii HOM05D003443 ORTHO05D009887 6.7e-93 345.5 431 45.9
arahy.Tifrunner.gnm1.ann1.5F0RSX Arachis hypogaea HOM05D003443 ORTHO05D009887 3.3e-92 343.2 406 46.8
MELO3C010459.2 Cucumis melo HOM05D003443 ORTHO05D009887 5.7e-92 342.4 400 47.5
arahy.Tifrunner.gnm1.ann1.JR3K98 Arachis hypogaea HOM05D003443 ORTHO05D009887 9.7e-92 341.7 403 46.7
Lalb_Chr10g0101921 Lupinus albus HOM05D003443 ORTHO05D009887 1.3e-91 341.3 396 47.2
Hund16841 Selenicereus undatus HOM05D003443 ORTHO05D009887 4.1e-90 336.3 391 48.6
Nitab4.5_0002816g0090 Nicotiana tabacum HOM05D003443 ORTHO05D009887 5.3e-90 335.9 395 46.1
PGSC0003DMG400014817 Solanum tuberosum HOM05D003443 ORTHO05D009887 7.0e-90 335.5 395 44.8
CAN.G48.26 Capsicum annuum HOM05D003443 ORTHO05D009887 9.1e-90 335.1 390 44.9
Duzib093G0763 Durio zibethinus HOM05D003443 ORTHO05D009887 2.6e-89 333.6 352 49.4
DCAR_003542 Daucus carota HOM05D003443 ORTHO05D009887 1.1e-87 328.2 392 45.2
Sc01g0001370 Simmondsia chinensis HOM05D003443 ORTHO05D009887 2.1e-86 323.9 382 45.0
HanXRQChr04g0111631 Helianthus annuus HOM05D003443 ORTHO05D009887 1.0e-85 321.6 392 44.4
Migut.C01151 Erythranthe guttata HOM05D003443 ORTHO05D009887 2.3e-85 320.5 392 45.2
Lsat_1_v5_gn_1_8320 Lactuca sativa HOM05D003443 ORTHO05D009887 5.2e-85 319.3 397 43.8
Solyc03g093210.3 Solanum lycopersicum HOM05D003443 ORTHO05D009887 1.5e-84 317.8 414 43.0
MSTRG.1462 Avicennia marina HOM05D003443 ORTHO05D009887 1.3e-83 314.7 392 44.6
Lj7C333G3 Lonicera japonica HOM05D003443 ORTHO05D009887 4.1e-82 309.7 324 50.0
Nitab4.5_0010023g0010 Nicotiana tabacum HOM05D003443 ORTHO05D009887 3.5e-81 306.6 470 38.9
SalBow7G0745 Salvia bowleyana HOM05D003443 ORTHO05D009887 3.5e-81 306.6 400 44.8
SalBow7G1610 Salvia bowleyana HOM05D003443 ORTHO05D009887 2.9e-80 303.5 399 44.4
Medtr5g459020 Medicago truncatula HOM05D003443 ORTHO05D009887 8.5e-80 302.0 348 46.8
AUR62004719 Chenopodium quinoa HOM05D003443 ORTHO05D009887 1.3e-75 288.1 389 42.7
EL10Ac1g00011 Beta vulgaris HOM05D003443 ORTHO05D009887 3.1e-74 283.5 391 42.5
ECA247G0446 Erigeron canadensis HOM05D003443 ORTHO05D009887 2.7e-73 280.4 355 42.8
Haze_00482 Corylus avellana HOM05D003443 ORTHO05D009887 3.5e-73 280.0 388 42.3
AUR62023638 Chenopodium quinoa HOM05D003443 ORTHO05D009887 3.2e-71 273.5 375 41.9
SGA_v2.0_scaffold52G18985 Striga asiatica HOM05D003443 ORTHO05D009887 3.0e-69 266.9 404 38.6
Peaxi162Scf00241g00037 Petunia axillaris HOM05D003443 ORTHO05D009887 1.1e-66 258.5 330 46.1
Actinidia25684 Actinidia chinensis HOM05D003443 ORTHO05D009887 1.7e-59 234.6 276 47.8
vmacro00815 Vaccinium macrocarpon HOM05D003443 ORTHO05D009887 2.9e-59 233.8 414 37.4
MBI06_g02575_MAGBIO Magnolia biondii HOM05D003443 ORTHO05D009887 1.7e-56 224.6 382 39.5
Oeu050896.1 Olea europaea HOM05D003443 ORTHO05D009887 2.3e-56 224.2 423 35.7
Sopen03g024010 Solanum pennellii HOM05D003443 ORTHO05D009887 3.0e-56 223.8 339 41.3
Potri.005G174900 Populus trichocarpa HOM05D003443 ORTHO05D009887 2.1e-54 217.6 388 35.8
Aqoxy5G02443 Aquilegia oxysepala HOM05D003443 ORTHO05D009887 6.4e-51 206.1 214 51.9
Actinidia29454 Actinidia chinensis HOM05D003443 ORTHO05D009887 1.4e-50 204.9 219 52.1
Cc10_g11010 Coffea canephora HOM05D003443 ORTHO05D009887 5.4e-50 203.0 267 41.9
Gohir.D05G235701 Gossypium hirsutum HOM05D003443 ORTHO05D009887 1.2e-49 201.8 225 48.0
ATR0684G011 Amborella trichopoda HOM05D003443 ORTHO05D009887 2.2e-35 154.5 238 37.4
MBI06_g44274_MAGBIO Magnolia biondii HOM05D003443 ORTHO05D009887 2.1e-33 147.9 316 33.2
MBI06_g35594_MAGBIO Magnolia biondii HOM05D003443 ORTHO05D009887 3.0e-32 144.1 175 46.9
Aqoxy5G02442 Aquilegia oxysepala HOM05D003443 ORTHO05D009887 4.9e-27 126.7 157 47.1
Cc10_g11020 Coffea canephora HOM05D003443 ORTHO05D009887 3.9e-24 117.1 114 43.9
MBI06_g35595_MAGBIO Magnolia biondii HOM05D003443 ORTHO05D009887 1.1e-23 115.5 138 46.4
Os04g0450500 Oryza sativa ssp. japonica HOM05D003443 ORTHO05D009887 9.0e-21 105.9 261 31.8
Lj7E334T0 Lonicera japonica HOM05D003443 ORTHO05D009887 6.9e-13 79.7 48 72.9
SEGI_24688 Sequoiadendron giganteum HOM05D003443 ORTHO05D009887 4.9e-11 73.6 192 31.8
PGSC0003DMG400021471 Solanum tuberosum HOM05D003443 ORTHO05D009887 7.9e-09 66.2 54 55.6
Migut.K01194 Erythranthe guttata HOM05D003443 ORTHO05D009887 2.3e-08 64.7 49 63.3
COL.COLO4_12190 Corchorus olitorius HOM05D003443 ORTHO05D009887 1.1e-07 62.4 34 73.5
Zm00001eb081310 Zea mays HOM05D003443 ORTHO05D009887 4.8e-06 57.0 110 34.5


User provided reference genes

Program Settings