Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN27G2814 Fragaria x ananassa HOM05D006715 ORTHO05D008345 0.0e+00 1131.7 551 100.0
FAN24G1213 Fragaria x ananassa HOM05D006715 ORTHO05D008345 6.4e-286 986.9 544 91.5
FvH4_2g13430 Fragaria vesca HOM05D006715 ORTHO05D008345 1.4e-285 985.7 544 91.5
RcHm_v2.0_Chr6g0275051 Rosa chinensis HOM05D006715 ORTHO05D008345 1.1e-234 816.6 556 78.1
RcHm_v2.0_Chr5g0050861 Rosa chinensis HOM05D006715 ORTHO05D008345 4.0e-195 685.3 436 80.7
Prupe.8G033600 Prunus persica HOM05D006715 ORTHO05D008345 1.0e-174 617.5 564 61.0
MD05G1027900 Malus domestica HOM05D006715 ORTHO05D008345 1.1e-173 614.0 556 60.8
Cfa018312 Carpinus fangiana HOM05D006715 ORTHO05D008345 5.4e-152 542.0 554 55.2
Manes.02G180601 Manihot esculenta HOM05D006715 ORTHO05D008345 4.2e-144 515.8 569 51.1
CiPaw.16G011000 Carya illinoinensis HOM05D006715 ORTHO05D008345 9.6e-141 504.6 556 52.7
CANSAT25G3857 Cannabis sativa HOM05D006715 ORTHO05D008345 9.0e-139 498.0 583 52.5
QL09p013340 Quercus lobata HOM05D006715 ORTHO05D008345 2.2e-129 466.8 537 50.5
TWI34G0194 Tripterygium wilfordii HOM05D006715 ORTHO05D008345 2.2e-129 466.8 598 47.2
Thecc.08G154500 Theobroma cacao HOM05D006715 ORTHO05D008345 9.3e-128 461.5 590 46.6
Phvul.004G094200 Phaseolus vulgaris HOM05D006715 ORTHO05D008345 1.8e-126 457.2 535 51.0
Ciclev10000601m.g Citrus clementina HOM05D006715 ORTHO05D008345 3.0e-126 456.4 547 49.9
Potri.005G193500 Populus trichocarpa HOM05D006715 ORTHO05D008345 3.3e-125 453.0 538 49.4
Cpa.g.sc1027.1 Carica papaya HOM05D006715 ORTHO05D008345 1.3e-124 451.1 585 46.8
Atru.chr13.2084 Acer truncatum HOM05D006715 ORTHO05D008345 1.2e-122 444.5 543 48.6
VMungo0464G1764 Vigna mungo HOM05D006715 ORTHO05D008345 1.5e-122 444.1 548 49.5
Duzib093G1010 Durio zibethinus HOM05D006715 ORTHO05D008345 5.9e-122 442.2 562 46.8
Gohir.A06G112504 Gossypium hirsutum HOM05D006715 ORTHO05D008345 1.0e-121 441.4 552 48.6
ClCG08G002210 Citrullus lanatus HOM05D006715 ORTHO05D008345 2.9e-121 439.9 562 47.5
Lj2g0009741 Lotus japonicus HOM05D006715 ORTHO05D008345 6.5e-121 438.7 552 48.6
Gorai.010G134600 Gossypium raimondii HOM05D006715 ORTHO05D008345 5.5e-120 435.6 552 48.0
Psat1g102000 Pisum sativum HOM05D006715 ORTHO05D008345 5.5e-120 435.6 557 47.4
Actinidia17784 Actinidia chinensis HOM05D006715 ORTHO05D008345 1.2e-119 434.5 571 47.3
Lj7A376T34 Lonicera japonica HOM05D006715 ORTHO05D008345 4.6e-119 432.6 577 46.3
TAR381G1273 Trochodendron aralioides HOM05D006715 ORTHO05D008345 3.9e-118 429.5 588 44.6
arahy.Tifrunner.gnm1.ann1.SG7PGU Arachis hypogaea HOM05D006715 ORTHO05D008345 5.1e-118 429.1 599 45.2
arahy.Tifrunner.gnm1.ann1.6MC3QX Arachis hypogaea HOM05D006715 ORTHO05D008345 5.7e-117 425.6 580 46.2
MELO3C025024.2 Cucumis melo HOM05D006715 ORTHO05D008345 3.4e-114 416.4 574 45.6
Medtr2g045070 Medicago truncatula HOM05D006715 ORTHO05D008345 8.5e-113 411.8 558 46.6
CsaV3_6G002600 Cucumis sativus L. HOM05D006715 ORTHO05D008345 2.7e-111 406.8 566 44.9
Sed0009104 Sechium edule HOM05D006715 ORTHO05D008345 9.7e-109 398.3 570 45.6
Peaxi162Scf00599g00121 Petunia axillaris HOM05D006715 ORTHO05D008345 4.8e-108 396.0 620 40.6
THA.LOC104804670 Tarenaya hassleriana HOM05D006715 ORTHO05D008345 4.8e-108 396.0 560 43.9
Nitab4.5_0001187g0100 Nicotiana tabacum HOM05D006715 ORTHO05D008345 2.4e-107 393.7 561 41.5
PGR042G1662 Punica granatum HOM05D006715 ORTHO05D008345 3.5e-106 389.8 586 43.7
COL.COLO4_29857 Corchorus olitorius HOM05D006715 ORTHO05D008345 1.7e-105 387.5 387 53.0
Sopen04g027550 Solanum pennellii HOM05D006715 ORTHO05D008345 3.8e-105 386.3 604 40.6
Eucgr.F02698 Eucalyptus grandis HOM05D006715 ORTHO05D008345 8.5e-105 385.2 567 44.6
Nn5g28769 Nelumbo nucifera HOM05D006715 ORTHO05D008345 8.5e-105 385.2 593 42.7
SGA_v2.0_scaffold25G11186 Striga asiatica HOM05D006715 ORTHO05D008345 2.5e-104 383.6 581 42.3
TPR.G23114 Trifolium pratense HOM05D006715 ORTHO05D008345 4.0e-102 376.3 389 51.9
Aqoxy5G00857 Aquilegia oxysepala HOM05D006715 ORTHO05D008345 6.7e-102 375.6 572 42.8
Hund26691 Selenicereus undatus HOM05D006715 ORTHO05D008345 1.2e-101 374.8 555 43.2
GSVIVG01034549001 Vitis vinifera HOM05D006715 ORTHO05D008345 2.0e-101 374.0 394 50.5
CAN.G1215.10 Capsicum annuum HOM05D006715 ORTHO05D008345 2.4e-99 367.1 588 40.1
Rhsim05G0181200 Rhododendron simsii HOM05D006715 ORTHO05D008345 5.9e-98 362.5 444 47.7
Glyma.16G166500 Glycine max HOM05D006715 ORTHO05D008345 1.0e-97 361.7 539 45.1
vmacro20039 Vaccinium macrocarpon HOM05D006715 ORTHO05D008345 1.0e-97 361.7 546 43.0
PSO675G4790 Papaver somniferum HOM05D006715 ORTHO05D008345 2.5e-96 357.1 576 41.5
Gohir.D06G116900 Gossypium hirsutum HOM05D006715 ORTHO05D008345 3.6e-95 353.2 456 47.8
Migut.N03207 Erythranthe guttata HOM05D006715 ORTHO05D008345 6.1e-95 352.4 525 44.0
MSTRG.24217 Avicennia marina HOM05D006715 ORTHO05D008345 5.2e-94 349.4 611 40.3
unitig_21.g20147 Utricularia gibba HOM05D006715 ORTHO05D008345 1.8e-91 340.9 582 40.5
Ca_26954_v3 Cicer arietinum L. HOM05D006715 ORTHO05D008345 2.0e-90 337.4 496 45.4
Lsat_1_v5_gn_9_41180 Lactuca sativa HOM05D006715 ORTHO05D008345 3.5e-90 336.7 558 42.1
Sp1g32410 Schrenkiella parvula HOM05D006715 ORTHO05D008345 4.5e-90 336.3 507 42.6
Haze_17767 Corylus avellana HOM05D006715 ORTHO05D008345 1.0e-89 335.1 293 57.0
AL1G51600 Arabidopsis lyrata HOM05D006715 ORTHO05D008345 8.6e-89 332.0 540 39.8
Thhalv10003905m.g Eutrema salsugineum HOM05D006715 ORTHO05D008345 1.1e-88 331.6 543 40.7
Dinv41067 Davidia involucrata HOM05D006715 ORTHO05D008345 1.5e-88 331.3 331 54.4
ECA232G1953 Erigeron canadensis HOM05D006715 ORTHO05D008345 9.5e-88 328.6 535 43.2
Aa31LG6G9940 Aethionema arabicum HOM05D006715 ORTHO05D008345 1.6e-87 327.8 596 38.3
DCAR_010095 Daucus carota HOM05D006715 ORTHO05D008345 8.9e-86 322.0 381 47.0
BcaC04g24108 Brassica carinata HOM05D006715 ORTHO05D008345 1.8e-83 314.3 478 44.8
AT1G43245 Arabidopsis thaliana HOM05D006715 ORTHO05D008345 2.4e-83 313.9 532 38.9
SalBow6G6609 Salvia bowleyana HOM05D006715 ORTHO05D008345 2.7e-82 310.5 527 40.2
BcaB01g02294 Brassica carinata HOM05D006715 ORTHO05D008345 3.5e-82 310.1 471 42.0
HanXRQChr11g0320291 Helianthus annuus HOM05D006715 ORTHO05D008345 1.3e-81 308.1 493 43.8
EL10Ac1g01568 Beta vulgaris HOM05D006715 ORTHO05D008345 4.3e-72 276.6 556 37.4
BraA09t35760Z Brassica rapa HOM05D006715 ORTHO05D008345 7.3e-72 275.8 469 41.2
CDE12G0089 Ceratophyllum demersum HOM05D006715 ORTHO05D008345 3.6e-71 273.5 558 33.7
A09p00880 Brassica napus HOM05D006715 ORTHO05D008345 1.1e-70 271.9 430 42.3
BolC9t53031H Brassica oleracea HOM05D006715 ORTHO05D008345 5.2e-70 269.6 436 43.1
C09p00980 Brassica napus HOM05D006715 ORTHO05D008345 8.9e-70 268.9 431 43.2
CARHR035370 Cardamine hirsuta HOM05D006715 ORTHO05D008345 2.6e-69 267.3 412 41.7
SHI09071 Sapria himalayana HOM05D006715 ORTHO05D008345 9.8e-69 265.4 622 35.4
ATR0820G173 Amborella trichopoda HOM05D006715 ORTHO05D008345 1.6e-66 258.1 537 35.9
PGSC0003DMG400024094 Solanum tuberosum HOM05D006715 ORTHO05D008345 3.6e-63 246.9 294 44.2
Zm00001eb083170 Zea mays HOM05D006715 ORTHO05D008345 1.2e-61 241.9 501 35.9
CSS0020422 Camellia sinensis var. sinensis HOM05D006715 ORTHO05D008345 1.9e-59 234.6 227 53.7
Os04g0423600 Oryza sativa ssp. japonica HOM05D006715 ORTHO05D008345 1.9e-59 234.6 519 34.5
Cc10_g14930 Coffea canephora HOM05D006715 ORTHO05D008345 1.6e-58 231.5 335 45.7
Lj2g0026984 Lotus japonicus HOM05D006715 ORTHO05D008345 4.6e-58 229.9 202 58.9
Nitab4.5_0002764g0020 Nicotiana tabacum HOM05D006715 ORTHO05D008345 1.0e-57 228.8 264 45.8
AUR62026687 Chenopodium quinoa HOM05D006715 ORTHO05D008345 1.3e-57 228.4 297 43.8
MBI17_g41095_MAGBIO Magnolia biondii HOM05D006715 ORTHO05D008345 1.1e-54 218.8 360 41.7
Lalb_Chr01g0009561 Lupinus albus HOM05D006715 ORTHO05D008345 3.2e-51 207.2 202 53.5
Sc02g0003950 Simmondsia chinensis HOM05D006715 ORTHO05D008345 1.0e-49 202.2 245 46.1
Lalb_Chr01g0009551 Lupinus albus HOM05D006715 ORTHO05D008345 1.3e-49 201.8 312 42.9
Glyma.16G166267 Glycine max HOM05D006715 ORTHO05D008345 2.1e-47 194.5 245 48.6
TAR381G1110 Trochodendron aralioides HOM05D006715 ORTHO05D008345 1.6e-42 178.3 255 40.8
Oeu031098.1 Olea europaea HOM05D006715 ORTHO05D008345 3.9e-41 173.7 367 36.2
SEGI_11470 Sequoiadendron giganteum HOM05D006715 ORTHO05D008345 5.1e-41 173.3 352 37.2
HPP92_009296 Vanilla planifolia HOM05D006715 ORTHO05D008345 5.1e-41 173.3 346 37.9
AUR62040600 Chenopodium quinoa HOM05D006715 ORTHO05D008345 6.6e-41 172.9 265 38.9
Carub.0001s3453 Capsella rubella HOM05D006715 ORTHO05D008345 2.6e-37 161.0 272 37.9
CSS0028068 Camellia sinensis var. sinensis HOM05D006715 ORTHO05D008345 7.6e-37 159.5 200 46.5
Carub.0001s3454 Capsella rubella HOM05D006715 ORTHO05D008345 3.0e-33 147.5 237 40.9
Glyma.16G166333 Glycine max HOM05D006715 ORTHO05D008345 1.5e-32 145.2 151 51.0
Potri.005G193701 Populus trichocarpa HOM05D006715 ORTHO05D008345 2.5e-32 144.4 201 40.8
SEGI_34185 Sequoiadendron giganteum HOM05D006715 ORTHO05D008345 1.8e-30 138.3 312 30.4
CSS0046539 Camellia sinensis var. sinensis HOM05D006715 ORTHO05D008345 1.3e-23 115.5 132 51.5
SEGI_20433 Sequoiadendron giganteum HOM05D006715 ORTHO05D008345 1.4e-19 102.1 261 35.2
Medtr3g062560 Medicago truncatula HOM05D006715 ORTHO05D008345 1.3e-17 95.5 191 38.7
Gohir.1Z049355 Gossypium hirsutum HOM05D006715 ORTHO05D008345 3.0e-17 94.4 108 47.2
HPP92_009297 Vanilla planifolia HOM05D006715 ORTHO05D008345 2.2e-15 88.2 126 41.3
QL02p038810 Quercus lobata HOM05D006715 ORTHO05D008345 1.4e-09 68.9 100 41.0
CSS0020713 Camellia sinensis var. sinensis HOM05D006715 ORTHO05D008345 2.3e-09 68.2 120 40.0
arahy.Tifrunner.gnm1.ann1.12T13Y Arachis hypogaea HOM05D006715 ORTHO05D008345 7.4e-08 63.2 60 50.0
SEGI_02927 Sequoiadendron giganteum HOM05D006715 ORTHO05D008345 7.4e-08 63.2 222 26.6
PRCOL_00006858 Prasinoderma coloniale HOM05D004492 ORTHO05D005602 1.4e-06 58.9 123 28.5


User provided reference genes

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