Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN27G2783 Fragaria x ananassa HOM05D000135 ORTHO05D019196 1.1e-40 169.5 79 100.0
FAN13G2165 Fragaria x ananassa HOM05D000135 ORTHO05D019196 2.1e-12 75.5 35 100.0
FAN16G3744 Fragaria x ananassa HOM05D000135 ORTHO05D019196 2.1e-12 75.5 35 100.0
FAN17G0474 Fragaria x ananassa HOM05D000135 ORTHO05D019196 2.1e-12 75.5 35 100.0
FAN17G0535 Fragaria x ananassa HOM05D000135 ORTHO05D019196 2.1e-12 75.5 35 100.0
FAN26G0799 Fragaria x ananassa HOM05D000135 ORTHO05D019196 2.1e-12 75.5 35 100.0
FAN18G2689 Fragaria x ananassa HOM05D000135 ORTHO05D019196 1.3e-11 72.8 35 97.1
FAN03G1486 Fragaria x ananassa HOM05D000135 ORTHO05D000203 2.3e-11 72.0 36 91.7
FAN16G3292 Fragaria x ananassa HOM05D000135 ORTHO05D000203 2.3e-11 72.0 36 91.7
FAN28G2192 Fragaria x ananassa HOM05D000135 ORTHO05D000203 2.3e-11 72.0 36 91.7
FAN08G3664 Fragaria x ananassa HOM05D002325 ORTHO05D000336 6.7e-11 70.5 32 100.0
FvH4_4g10830 Fragaria vesca HOM05D000135 ORTHO05D000203 8.7e-11 70.1 36 88.9
FAN07G1946 Fragaria x ananassa HOM05D000135 ORTHO05D000203 8.7e-11 70.1 36 88.9
FAN17G0225 Fragaria x ananassa HOM05D000135 ORTHO05D000203 8.7e-11 70.1 36 88.9
FAN07G2731 Fragaria x ananassa HOM05D000135 ORTHO05D000203 1.1e-10 69.7 36 88.9
FAN12G3856 Fragaria x ananassa HOM05D000135 ORTHO05D000203 1.1e-10 69.7 36 86.1
RcHm_v2.0_Chr4g0406651 Rosa chinensis HOM05D000135 ORTHO05D000203 1.1e-10 69.7 36 88.9
FAN20G1347 Fragaria x ananassa HOM05D000135 ORTHO05D000203 1.5e-10 69.3 36 88.9
FAN28G1087 Fragaria x ananassa HOM05D000135 ORTHO05D000203 1.5e-10 69.3 36 88.9
MD13G1272800 Malus domestica HOM05D000135 ORTHO05D000203 2.5e-10 68.6 36 86.1
FAN01G0394 Fragaria x ananassa HOM05D004645 ORTHO05D005693 3.3e-10 68.2 34 91.2
FAN05G1619 Fragaria x ananassa HOM05D000135 ORTHO05D000203 3.3e-10 68.2 34 91.2
FAN06G1102 Fragaria x ananassa HOM05D000135 ORTHO05D000203 3.3e-10 68.2 34 91.2
FAN11G1946 Fragaria x ananassa HOM05D015405 ORTHO05D000203 3.3e-10 68.2 34 91.2
FAN11G2972 Fragaria x ananassa HOM05D000135 ORTHO05D000203 3.3e-10 68.2 34 91.2
FAN12G2999 Fragaria x ananassa HOM05D000135 ORTHO05D000203 3.3e-10 68.2 34 91.2
FAN13G0473 Fragaria x ananassa HOM05D000135 ORTHO05D000203 3.3e-10 68.2 34 91.2
FAN18G1822 Fragaria x ananassa HOM05D000135 ORTHO05D000203 3.3e-10 68.2 34 91.2
FAN21G1664 Fragaria x ananassa HOM05D000135 ORTHO05D000203 3.3e-10 68.2 34 91.2
FAN23G1951 Fragaria x ananassa HOM05D000135 ORTHO05D000203 3.3e-10 68.2 34 91.2
FAN24G3071 Fragaria x ananassa HOM05D000135 ORTHO05D000203 3.3e-10 68.2 34 91.2
FAN24G3438 Fragaria x ananassa HOM05D000135 ORTHO05D000203 3.3e-10 68.2 34 91.2
FAN25G2085 Fragaria x ananassa HOM05D000135 ORTHO05D000203 3.3e-10 68.2 34 91.2
MD04G1041400 Malus domestica HOM05D000135 ORTHO05D000203 4.3e-10 67.8 36 86.1
Prupe.1G194800 Prunus persica HOM05D000135 ORTHO05D000203 4.3e-10 67.8 36 86.1
FAN07G0831 Fragaria x ananassa HOM05D000135 ORTHO05D000203 9.6e-10 66.6 34 88.2
FAN27G1943 Fragaria x ananassa HOM05D000135 ORTHO05D000203 2.8e-09 65.1 34 88.2
FAN05G2151 Fragaria x ananassa HOM05D000135 ORTHO05D000203 3.7e-09 64.7 34 85.3
FAN08G0585 Fragaria x ananassa HOM05D000135 ORTHO05D000203 4.8e-09 64.3 36 83.3
QL10p049466 Quercus lobata HOM05D000135 ORTHO05D000203 1.4e-08 62.8 36 77.8
Ca_20790_v3 Cicer arietinum L. HOM05D000135 ORTHO05D000203 3.1e-08 61.6 36 77.8
Medtr4g067270 Medicago truncatula HOM05D000135 ORTHO05D000203 3.1e-08 61.6 36 77.8
Psat7g209840 Pisum sativum HOM05D000135 ORTHO05D000203 3.1e-08 61.6 36 77.8
Potri.007G128600 Populus trichocarpa HOM05D000135 ORTHO05D000203 3.1e-08 61.6 36 77.8
CSS0038594 Camellia sinensis var. sinensis HOM05D000135 ORTHO05D000203 4.0e-08 61.2 36 77.8
CSS0046428 Camellia sinensis var. sinensis HOM05D000135 ORTHO05D000203 4.0e-08 61.2 36 77.8
ClCG07G015690 Citrullus lanatus HOM05D000135 ORTHO05D000203 4.0e-08 61.2 36 77.8
COL.COLO4_07674 Corchorus olitorius HOM05D000135 ORTHO05D000203 4.0e-08 61.2 35 80.0
MELO3C017712.2 Cucumis melo HOM05D000135 ORTHO05D000203 4.0e-08 61.2 36 77.8
CsaV3_4G003420 Cucumis sativus L. HOM05D000135 ORTHO05D000203 4.0e-08 61.2 36 77.8
Dinv44187 Davidia involucrata HOM05D000135 ORTHO05D000203 4.0e-08 61.2 36 77.8
Duzib151G1013 Durio zibethinus HOM05D000135 ORTHO05D000203 4.0e-08 61.2 36 75.0
Lj3g0028251 Lotus japonicus HOM05D000135 ORTHO05D000203 4.0e-08 61.2 36 77.8
Hma1.2p1_0847F.1_g227905 Hydrangea macrophylla HOM05D000135 ORTHO05D000203 5.3e-08 60.8 36 77.8
Sabra07G0105100 Salix brachista HOM05D000135 ORTHO05D000203 5.3e-08 60.8 37 73.0
Cfa015171 Carpinus fangiana HOM05D000135 ORTHO05D000203 6.9e-08 60.5 36 75.0
Haze_01502 Corylus avellana HOM05D000135 ORTHO05D000203 6.9e-08 60.5 36 75.0
MBI11_g23340_MAGBIO Magnolia biondii HOM05D000135 ORTHO05D000203 6.9e-08 60.5 36 75.0
Nitab4.5_0002084g0060 Nicotiana tabacum HOM05D000135 ORTHO05D000203 6.9e-08 60.5 36 75.0
Nitab4.5_0006914g0010 Nicotiana tabacum HOM05D000135 ORTHO05D000203 6.9e-08 60.5 36 75.0
Peaxi162Scf00413g00063 Petunia axillaris HOM05D000135 ORTHO05D000203 6.9e-08 60.5 36 75.0
Thecc.04G179100 Theobroma cacao HOM05D000135 ORTHO05D000203 6.9e-08 60.5 36 75.0
Sopen06g029610 Solanum pennellii HOM05D000135 ORTHO05D000203 9.0e-08 60.1 36 75.0
PGSC0003DMG400026914 Solanum tuberosum HOM05D000135 ORTHO05D000203 9.0e-08 60.1 36 75.0
TPR.G34210 Trifolium pratense HOM05D000135 ORTHO05D000203 9.0e-08 60.1 36 75.0
Cc03_g12870 Coffea canephora HOM05D000135 ORTHO05D000203 1.2e-07 59.7 36 77.8
Glyma.15G030100 Glycine max HOM05D000135 ORTHO05D000203 1.2e-07 59.7 36 75.0
Hma1.2p1_0324F.1_g125393 Hydrangea macrophylla HOM05D000135 ORTHO05D000203 1.2e-07 59.7 36 77.8
Hma1.2p1_0324F.1_g125420 Hydrangea macrophylla HOM05D000135 ORTHO05D000203 1.2e-07 59.7 36 77.8
Cpa.g.sc9.284 Carica papaya HOM05D000135 ORTHO05D000203 2.0e-07 58.9 36 75.0
CiPaw.01G099700 Carya illinoinensis HOM05D000135 ORTHO05D000203 2.0e-07 58.9 37 70.3
Dinv22734 Davidia involucrata HOM05D000135 ORTHO05D000203 2.0e-07 58.9 36 72.2
VMungo1080G0313 Vigna mungo HOM05D000135 ORTHO05D000203 2.0e-07 58.9 36 75.0
Oeu034458.1 Olea europaea HOM05D000135 ORTHO05D000203 2.6e-07 58.5 36 75.0
Rhsim09G0029100 Rhododendron simsii HOM05D000135 ORTHO05D000203 2.6e-07 58.5 36 75.0
TAR633G0712 Trochodendron aralioides HOM05D000135 ORTHO05D000203 2.6e-07 58.5 37 67.6
Migut.G01083 Erythranthe guttata HOM05D000135 ORTHO05D000203 3.4e-07 58.2 36 72.2
Potri.017G029700 Populus trichocarpa HOM05D000135 ORTHO05D000203 3.4e-07 58.2 36 72.2
TWI63G1094 Tripterygium wilfordii HOM05D000135 ORTHO05D000203 3.4e-07 58.2 36 75.0
FAN20G2801 Fragaria x ananassa HOM05D005731 ORTHO05D000222 4.5e-07 57.8 26 100.0
Lalb_Chr24g0396851 Lupinus albus HOM05D000135 ORTHO05D000203 5.8e-07 57.4 36 72.2
PSO675G0541 Papaver somniferum HOM05D000135 ORTHO05D000203 5.8e-07 57.4 36 69.4
PSO732G0454 Papaver somniferum HOM05D000135 ORTHO05D000203 5.8e-07 57.4 36 69.4
Rhsim02G0077300 Rhododendron simsii HOM05D000135 ORTHO05D000203 5.8e-07 57.4 36 75.0
Eucgr.H00370 Eucalyptus grandis HOM05D000135 ORTHO05D000203 7.6e-07 57.0 36 72.2
Lj6C29T3 Lonicera japonica HOM05D000135 ORTHO05D000203 7.6e-07 57.0 36 75.0
Lj1g0017188 Lotus japonicus HOM05D000135 ORTHO05D000203 7.6e-07 57.0 36 72.2
Lalb_Chr22g0357511 Lupinus albus HOM05D000135 ORTHO05D000203 7.6e-07 57.0 36 72.2
Peaxi162Scf01052g00031 Petunia axillaris HOM05D000135 ORTHO05D000203 7.6e-07 57.0 37 67.6
Phvul.005G152900 Phaseolus vulgaris HOM05D000135 ORTHO05D000203 7.6e-07 57.0 36 72.2
Duzib268G1408 Durio zibethinus HOM05D000135 ORTHO05D000203 9.9e-07 56.6 36 69.4
Lj3P181T31 Lonicera japonica HOM05D000135 ORTHO05D000203 9.9e-07 56.6 35 74.3
Lj3P188T13 Lonicera japonica HOM05D000135 ORTHO05D000203 9.9e-07 56.6 35 74.3
Medtr7g089760 Medicago truncatula HOM05D000135 ORTHO05D000203 9.9e-07 56.6 36 72.2
CAN.G65.168 Capsicum annuum HOM05D000135 ORTHO05D000203 1.3e-06 56.2 36 69.4
ECA240G3776 Erigeron canadensis HOM05D004190 ORTHO05D000203 1.3e-06 56.2 36 63.9
Oeu053828.1 Olea europaea HOM05D000135 ORTHO05D000203 1.3e-06 56.2 37 70.3
SalBow3G3880 Salvia bowleyana HOM05D000135 ORTHO05D000203 1.7e-06 55.8 32 75.0
TAR362G0223 Trochodendron aralioides HOM05D000135 ORTHO05D000203 1.7e-06 55.8 36 66.7
TAR636G0693 Trochodendron aralioides HOM05D000135 ORTHO05D000203 1.7e-06 55.8 36 69.4
CSS0033780 Camellia sinensis var. sinensis HOM05D000135 ORTHO05D000203 2.2e-06 55.5 36 72.2
Ciclev10022299m.g Citrus clementina HOM05D000135 ORTHO05D000203 2.2e-06 55.5 36 69.4
Duzib212G0491 Durio zibethinus HOM05D000135 ORTHO05D000203 2.2e-06 55.5 35 71.4
Eucgr.H00711 Eucalyptus grandis HOM05D000135 ORTHO05D000203 2.2e-06 55.5 36 72.2
TPR.G34632 Trifolium pratense HOM05D000135 ORTHO05D000203 2.2e-06 55.5 36 69.4
Aqoxy2G04089 Aquilegia oxysepala HOM05D000135 ORTHO05D000203 2.9e-06 55.1 36 69.4
BcaB01g02518 Brassica carinata HOM05D000135 ORTHO05D000203 2.9e-06 55.1 37 64.9
CANSAT01G0805 Cannabis sativa HOM05D000135 ORTHO05D000203 3.8e-06 54.7 36 69.4
Nn3g20143 Nelumbo nucifera HOM05D000135 ORTHO05D000203 3.8e-06 54.7 36 66.7
Sp1g04810 Schrenkiella parvula HOM05D000135 ORTHO05D019196 3.8e-06 54.7 28 85.7
Sp6g03330 Schrenkiella parvula HOM05D000135 ORTHO05D000203 3.8e-06 54.7 37 64.9
Solyc05g050750.1 Solanum lycopersicum HOM05D000135 ORTHO05D000203 3.8e-06 54.7 36 66.7
Sopen05g029160 Solanum pennellii HOM05D000135 ORTHO05D000203 3.8e-06 54.7 36 66.7
TWI15G0616 Tripterygium wilfordii HOM05D000135 ORTHO05D000203 3.8e-06 54.7 35 71.4
Cfa010633 Carpinus fangiana HOM05D000135 ORTHO05D000203 4.9e-06 54.3 36 69.4
Ca_08386_v3 Cicer arietinum L. HOM05D000135 ORTHO05D000203 4.9e-06 54.3 36 66.7
Haze_03575 Corylus avellana HOM05D000135 ORTHO05D000203 4.9e-06 54.3 36 69.4
Glyma.19G129800 Glycine max HOM05D000135 ORTHO05D000203 4.9e-06 54.3 36 69.4
Sed0019332 Sechium edule HOM05D000135 ORTHO05D000203 4.9e-06 54.3 36 66.7
TWI36G0484 Tripterygium wilfordii HOM05D000135 ORTHO05D000203 4.9e-06 54.3 36 69.4
TWI75G0678 Tripterygium wilfordii HOM05D000135 ORTHO05D000203 4.9e-06 54.3 36 69.4
HPP92_005522 Vanilla planifolia HOM05D000135 ORTHO05D000203 4.9e-06 54.3 36 66.7
CARHR138380 Cardamine hirsuta HOM05D000135 ORTHO05D000203 6.4e-06 53.9 53 50.9
Gohir.A02G012700 Gossypium hirsutum HOM05D000135 ORTHO05D000203 6.4e-06 53.9 36 61.1
Gorai.005G016900 Gossypium raimondii HOM05D000135 ORTHO05D000203 6.4e-06 53.9 36 61.1
Lalb_Chr14g0365761 Lupinus albus HOM05D000135 ORTHO05D000203 6.4e-06 53.9 36 66.7
Solyc06g083000.1 Solanum lycopersicum HOM05D000135 ORTHO05D000203 6.4e-06 53.9 36 66.7
PGSC0003DMG400006998 Solanum tuberosum HOM05D000135 ORTHO05D000203 6.4e-06 53.9 36 63.9
THA.LOC104822464 Tarenaya hassleriana HOM05D000135 ORTHO05D000203 6.4e-06 53.9 36 69.4
Atru.chr6.3533 Acer truncatum HOM05D000135 ORTHO05D000203 8.4e-06 53.5 36 66.7
Actinidia23799 Actinidia chinensis HOM05D000135 ORTHO05D000203 8.4e-06 53.5 36 69.4
A03p30480 Brassica napus HOM05D000135 ORTHO05D000203 8.4e-06 53.5 37 64.9
C03p36900 Brassica napus HOM05D000135 ORTHO05D000203 8.4e-06 53.5 37 64.9
C08p51480 Brassica napus HOM05D000135 ORTHO05D000203 8.4e-06 53.5 28 82.1
BolC3t15997H Brassica oleracea HOM05D000135 ORTHO05D000203 8.4e-06 53.5 37 64.9
BraA03t12230Z Brassica rapa HOM05D000135 ORTHO05D000203 8.4e-06 53.5 37 64.9
CDE02G4030 Ceratophyllum demersum HOM05D005923 ORTHO05D000203 8.4e-06 53.5 36 69.4
CDE06G0160 Ceratophyllum demersum HOM05D000135 ORTHO05D000203 8.4e-06 53.5 36 61.1
Duzib133G0071 Durio zibethinus HOM05D000135 ORTHO05D000203 8.4e-06 53.5 36 69.4
Gohir.D02G013400 Gossypium hirsutum HOM05D000135 ORTHO05D000203 8.4e-06 53.5 36 61.1
Lj2P1114T31 Lonicera japonica HOM05D000135 ORTHO05D000203 8.4e-06 53.5 37 62.2
Lalb_Chr03g0026101 Lupinus albus HOM05D000135 ORTHO05D000203 8.4e-06 53.5 37 64.9
Psat1g007000 Pisum sativum HOM05D000135 ORTHO05D000203 8.4e-06 53.5 36 69.4
Rhsim01G0248200 Rhododendron simsii HOM05D000135 ORTHO05D000203 8.4e-06 53.5 36 66.7
PGSC0003DMG402027685 Solanum tuberosum HOM05D000135 ORTHO05D000203 8.4e-06 53.5 36 66.7
TPR.G18863 Trifolium pratense HOM05D000135 ORTHO05D000203 8.4e-06 53.5 36 69.4


User provided reference genes

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