Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN27G2782 Fragaria x ananassa HOM05D005571 ORTHO05D006919 2.5e-113 412.1 216 100.0
FvH4_2g37430 Fragaria vesca HOM05D005571 ORTHO05D006919 2.5e-108 395.6 220 95.5
FAN20G2818 Fragaria x ananassa HOM05D005571 ORTHO05D006919 1.6e-107 392.9 216 95.8
FAN15G1374 Fragaria x ananassa HOM05D005571 ORTHO05D006919 2.0e-105 386.0 216 95.4
RcHm_v2.0_Chr6g0304291 Rosa chinensis HOM05D005571 ORTHO05D006919 1.7e-93 346.3 216 88.4
Thecc.08G059400 Theobroma cacao HOM05D005571 ORTHO05D006919 8.1e-59 231.1 217 64.5
Potri.005G250800 Populus trichocarpa HOM05D005571 ORTHO05D006919 1.1e-58 230.7 215 64.7
Sabra05G0194000 Salix brachista HOM05D005571 ORTHO05D006919 1.8e-58 229.9 215 63.3
TWI56G1114 Tripterygium wilfordii HOM05D005571 ORTHO05D006919 1.8e-58 229.9 212 63.7
QL02p014184 Quercus lobata HOM05D005571 ORTHO05D006919 1.7e-56 223.4 219 61.6
CiPaw.08G073400 Carya illinoinensis HOM05D005571 ORTHO05D006919 1.1e-55 220.7 221 62.0
COL.COLO4_05218 Corchorus olitorius HOM05D005571 ORTHO05D006919 1.4e-55 220.3 215 61.9
Ciclev10002509m.g Citrus clementina HOM05D005571 ORTHO05D006919 4.1e-55 218.8 204 64.7
Gohir.A05G179400 Gossypium hirsutum HOM05D005571 ORTHO05D006919 4.1e-55 218.8 222 60.8
Haze_22782 Corylus avellana HOM05D005571 ORTHO05D006919 5.4e-55 218.4 210 63.3
Duzib116G0932 Durio zibethinus HOM05D005571 ORTHO05D006919 7.1e-55 218.0 218 61.5
Gohir.D05G182600 Gossypium hirsutum HOM05D005571 ORTHO05D006919 1.6e-54 216.9 222 61.3
Gorai.009G187900 Gossypium raimondii HOM05D005571 ORTHO05D006919 1.6e-54 216.9 222 61.3
Cfa014080 Carpinus fangiana HOM05D005571 ORTHO05D006919 2.1e-54 216.5 209 60.8
Potri.002G010400 Populus trichocarpa HOM05D005571 ORTHO05D006919 2.7e-54 216.1 214 61.2
Duzib093G0863 Durio zibethinus HOM05D005571 ORTHO05D006919 1.0e-53 214.2 217 60.8
Sabra02G0007800 Salix brachista HOM05D005571 ORTHO05D006919 6.6e-53 211.5 215 60.0
Manes.18G005301 Manihot esculenta HOM05D005571 ORTHO05D006919 6.2e-51 204.9 215 60.0
TWI12G0392 Tripterygium wilfordii HOM05D005571 ORTHO05D006919 6.2e-51 204.9 212 59.4
CiPaw.07G138600 Carya illinoinensis HOM05D005571 ORTHO05D006919 3.1e-50 202.6 215 60.0
ClCG08G009410 Citrullus lanatus HOM05D005571 ORTHO05D006919 1.5e-49 200.3 215 54.9
Actinidia17042 Actinidia chinensis HOM05D005571 ORTHO05D006919 2.9e-48 196.1 215 55.8
CsaV3_6G031520 Cucumis sativus L. HOM05D005571 ORTHO05D006919 4.9e-48 195.3 216 56.0
Manes.05G133900 Manihot esculenta HOM05D005571 ORTHO05D006919 6.4e-48 194.9 214 56.5
Lj1g0015612 Lotus japonicus HOM05D005571 ORTHO05D006919 3.2e-47 192.6 222 58.6
Actinidia15492 Actinidia chinensis HOM05D005571 ORTHO05D006919 4.1e-47 192.2 215 54.9
MELO3C026535.2 Cucumis melo HOM05D005571 ORTHO05D006919 9.2e-47 191.0 216 55.6
vmacro21809 Vaccinium macrocarpon HOM05D005571 ORTHO05D006919 9.2e-47 191.0 218 54.6
Gorai.005G113600 Gossypium raimondii HOM05D005571 ORTHO05D006919 2.1e-46 189.9 210 56.7
Gohir.D02G100200 Gossypium hirsutum HOM05D005571 ORTHO05D006919 1.3e-45 187.2 210 56.2
GSVIVG01008671001 Vitis vinifera HOM05D005571 ORTHO05D006919 3.0e-45 186.0 215 54.4
Glyma.06G018100 Glycine max HOM05D005571 ORTHO05D006919 3.9e-45 185.7 211 56.4
Hma1.2p1_0157F.1_g069390 Hydrangea macrophylla HOM05D005571 ORTHO05D006919 8.6e-45 184.5 216 52.8
Rhsim06G0007100 Rhododendron simsii HOM05D005571 ORTHO05D006919 4.3e-44 182.2 219 54.3
Cfa012650 Carpinus fangiana HOM05D005571 ORTHO05D006919 1.2e-43 180.6 189 57.7
Phvul.009G010900 Phaseolus vulgaris HOM05D005571 ORTHO05D006919 8.1e-43 177.9 205 56.6
PGR083G0609 Punica granatum HOM05D005571 ORTHO05D006919 8.1e-43 177.9 216 52.8
VMungo1309G0957 Vigna mungo HOM05D005571 ORTHO05D006919 8.9e-42 174.5 183 60.1
Prupe.1G354300 Prunus persica HOM05D005571 ORTHO05D006919 1.2e-41 174.1 285 50.9
Migut.C00385 Erythranthe guttata HOM05D005571 ORTHO05D006919 3.4e-41 172.6 226 53.1
Nitab4.5_0000588g0080 Nicotiana tabacum HOM05D005571 ORTHO05D006919 5.8e-41 171.8 213 54.0
Sed0002015 Sechium edule HOM05D005571 ORTHO05D006919 1.3e-40 170.6 218 50.5
Glyma.04G017800 Glycine max HOM05D005571 ORTHO05D006919 1.1e-39 167.5 211 53.6
CAN.G311.116 Capsicum annuum HOM05D005571 ORTHO05D006919 1.4e-39 167.2 218 52.3
Dinv05532 Davidia involucrata HOM05D005571 ORTHO05D006919 3.2e-39 166.0 190 55.8
Peaxi162Scf00893g00005 Petunia axillaris HOM05D005571 ORTHO05D006919 5.4e-39 165.2 214 53.3
THA.LOC104825425 Tarenaya hassleriana HOM05D005571 ORTHO05D006919 7.1e-39 164.9 194 57.2
TAR628G0603 Trochodendron aralioides HOM05D005571 ORTHO05D006919 7.1e-39 164.9 222 50.5
Cc10_g00650 Coffea canephora HOM05D005571 ORTHO05D006919 3.5e-38 162.5 220 50.5
Lj4A11T70 Lonicera japonica HOM05D005571 ORTHO05D006919 1.0e-37 161.0 219 49.3
Oeu064631.1 Olea europaea HOM05D005571 ORTHO05D006919 2.3e-37 159.8 215 52.1
Lalb_Chr23g0265781 Lupinus albus HOM05D005571 ORTHO05D006919 3.9e-37 159.1 216 54.2
CSS0030992 Camellia sinensis var. sinensis HOM05D005571 ORTHO05D006919 8.7e-37 157.9 213 49.8
SalBow5G5667 Salvia bowleyana HOM05D005571 ORTHO05D006919 1.9e-36 156.8 195 51.8
SalBow7G0698 Salvia bowleyana HOM05D005571 ORTHO05D006919 1.9e-36 156.8 195 51.8
TPR.G38112 Trifolium pratense HOM05D005571 ORTHO05D006919 3.3e-36 156.0 224 52.2
Medtr3g115300 Medicago truncatula HOM05D005571 ORTHO05D006919 5.6e-36 155.2 226 52.2
MSTRG.24929 Avicennia marina HOM05D005571 ORTHO05D006919 7.3e-36 154.8 196 55.6
CSS0029462 Camellia sinensis var. sinensis HOM05D005571 ORTHO05D006919 1.3e-35 154.1 217 49.8
arahy.Tifrunner.gnm1.ann1.G9B5FS Arachis hypogaea HOM05D005571 ORTHO05D006919 1.6e-35 153.7 204 53.4
arahy.Tifrunner.gnm1.ann1.VC4QUA Arachis hypogaea HOM05D005571 ORTHO05D006919 2.8e-35 152.9 209 53.1
PGSC0003DMG400009903 Solanum tuberosum HOM05D005571 ORTHO05D006919 4.8e-35 152.1 217 50.7
Oeu035840.1 Olea europaea HOM05D005571 ORTHO05D006919 1.4e-34 150.6 214 49.1
Oeu000692.1 Olea europaea HOM05D005571 ORTHO05D006919 1.8e-34 150.2 216 49.1
CANSAT25G0564 Cannabis sativa HOM05D005571 ORTHO05D006919 4.0e-34 149.1 214 50.5
Psat0s2670g0120 Pisum sativum HOM05D005571 ORTHO05D006919 9.0e-34 147.9 201 53.2
Sopen04g035980 Solanum pennellii HOM05D005571 ORTHO05D006919 1.5e-33 147.1 216 50.0
Atru.chr13.137 Acer truncatum HOM05D005571 ORTHO05D006919 3.8e-32 142.5 147 59.2
Aqoxy6G01708 Aquilegia oxysepala HOM05D005571 ORTHO05D006919 4.9e-32 142.1 219 45.2
Nn6g31737 Nelumbo nucifera HOM05D005571 ORTHO05D006919 4.9e-32 142.1 208 48.1
Ca_15432_v3 Cicer arietinum L. HOM05D005571 ORTHO05D006919 4.2e-31 139.0 181 54.1
Ca_15457_v3 Cicer arietinum L. HOM05D005571 ORTHO05D006919 4.2e-31 139.0 181 54.1
DCAR_009532 Daucus carota HOM05D005571 ORTHO05D006919 1.6e-30 137.1 192 54.2
Lsat_1_v5_gn_2_4041 Lactuca sativa HOM05D005571 ORTHO05D006919 1.6e-30 137.1 193 48.7
MSTRG.977 Avicennia marina HOM05D005571 ORTHO05D006919 2.1e-30 136.7 193 49.2
Sabra11G0114300 Salix brachista HOM05D005571 ORTHO05D006919 3.5e-30 136.0 120 64.2
Sc02g0009100 Simmondsia chinensis HOM05D005571 ORTHO05D006919 1.0e-29 134.4 211 48.3
THA.LOC104813174 Tarenaya hassleriana HOM05D005571 ORTHO05D006919 1.8e-29 133.7 197 49.2
SGA_v2.0_scaffold133G34635 Striga asiatica HOM05D005571 ORTHO05D006919 2.3e-29 133.3 219 47.0
HanXRQChr06g0183961 Helianthus annuus HOM05D005571 ORTHO05D006919 3.0e-29 132.9 187 48.7
MBI05_g43168_MAGBIO Magnolia biondii HOM05D005571 ORTHO05D006919 3.0e-29 132.9 217 47.0
Dinv31944 Davidia involucrata HOM05D005571 ORTHO05D006919 9.6e-28 127.9 191 48.7
Hund01764 Selenicereus undatus HOM05D005571 ORTHO05D006919 9.6e-28 127.9 219 46.6
Aa31LG9G12460 Aethionema arabicum HOM05D005571 ORTHO05D006919 1.6e-27 127.1 220 46.4
HanXRQChr14g0428071 Helianthus annuus HOM05D005571 ORTHO05D006919 1.6e-27 127.1 221 46.2
BcaB01g04868 Brassica carinata HOM05D005571 ORTHO05D006919 2.1e-27 126.7 189 46.6
PSO675G2006 Papaver somniferum HOM05D005571 ORTHO05D006919 1.4e-26 124.0 190 44.2
PSO541G4697 Papaver somniferum HOM05D005571 ORTHO05D006919 1.2e-25 120.9 190 43.2
Carub.0008s0685 Capsella rubella HOM05D005571 ORTHO05D006919 2.0e-25 120.2 209 42.6
CSS0039739 Camellia sinensis var. sinensis HOM05D005571 ORTHO05D006919 5.8e-25 118.6 216 44.9
AT5G42330 Arabidopsis thaliana HOM05D005571 ORTHO05D006919 9.9e-25 117.9 219 46.1
Thhalv10014687m.g Eutrema salsugineum HOM05D005571 ORTHO05D006919 9.9e-25 117.9 222 49.5
unitig_747.g21542 Utricularia gibba HOM05D005571 ORTHO05D006919 1.7e-24 117.1 224 40.6
CARHR284960 Cardamine hirsuta HOM05D005571 ORTHO05D006919 4.9e-24 115.5 220 45.9
Sp6g25100 Schrenkiella parvula HOM05D005571 ORTHO05D006919 8.4e-24 114.8 214 45.8
BcaB01g05139 Brassica carinata HOM05D005571 ORTHO05D006919 1.9e-23 113.6 213 44.6
C03p11000 Brassica napus HOM05D005571 ORTHO05D006919 4.2e-23 112.5 213 44.1
BolC3t13569H Brassica oleracea HOM05D005571 ORTHO05D006919 7.1e-23 111.7 216 46.3
AL8G19260 Arabidopsis lyrata HOM05D005571 ORTHO05D006919 9.3e-23 111.3 225 45.8
Duzib128G0429 Durio zibethinus HOM05D005571 ORTHO05D006919 9.3e-23 111.3 103 63.1
ECA238G3324 Erigeron canadensis HOM05D005571 ORTHO05D007881 9.3e-23 111.3 156 49.4
Gohir.A02G084300 Gossypium hirsutum HOM05D005571 ORTHO05D006919 9.3e-23 111.3 146 50.0
A03p09420 Brassica napus HOM05D005571 ORTHO05D006919 1.2e-22 110.9 214 44.4
BraA03t10260Z Brassica rapa HOM05D005571 ORTHO05D006919 1.2e-22 110.9 214 44.4
EL10Ac1g01953 Beta vulgaris HOM05D005571 ORTHO05D006919 2.7e-22 109.8 219 44.3
Cpa.g.c36471 Carica papaya HOM05D005571 ORTHO05D006919 4.6e-22 109.0 88 69.3
Ah.11g041150 Amaranthus hybridus HOM05D005571 ORTHO05D006919 1.5e-20 104.0 213 41.8
AUR62040795 Chenopodium quinoa HOM05D005571 ORTHO05D006919 1.6e-19 100.5 199 43.2
Hund05103 Selenicereus undatus HOM05D001348 ORTHO05D002788 3.7e-19 99.4 198 45.5
BcaB08g36584 Brassica carinata HOM05D005571 ORTHO05D006919 1.4e-18 97.4 208 39.9
CSS0038566 Camellia sinensis var. sinensis HOM05D005571 ORTHO05D006919 4.0e-18 95.9 216 37.5
SHI42933 Sapria himalayana HOM05D005571 ORTHO05D006919 1.3e-16 90.9 183 39.9
unitig_0.g2084 Utricularia gibba HOM05D005571 ORTHO05D006919 1.4e-15 87.4 182 40.1
Sabra11G0115000 Salix brachista HOM05D005571 ORTHO05D006919 3.2e-15 86.3 78 60.3
Sabra11G0115600 Salix brachista HOM05D005571 ORTHO05D006919 3.2e-15 86.3 78 60.3
Os07g0474300 Oryza sativa ssp. japonica HOM05D033341 ORTHO05D036979 1.8e-13 80.5 244 34.4
Solyc04g082380.4 Solanum lycopersicum HOM05D005571 ORTHO05D006919 1.9e-12 77.0 102 51.0
CDE04G0695 Ceratophyllum demersum HOM05D005571 ORTHO05D006919 3.7e-11 72.8 181 38.7
A10p20370 Brassica napus HOM05D005571 ORTHO05D006919 8.2e-11 71.6 196 37.2
Sc15g0004410 Simmondsia chinensis HOM05D005571 ORTHO05D006919 1.1e-10 71.2 170 38.2
HPP92_021048 Vanilla planifolia HOM05D005571 ORTHO05D006919 6.9e-10 68.6 186 38.2
BolC9t58559H Brassica oleracea HOM05D005571 ORTHO05D006919 1.2e-09 67.8 173 35.8
Thecc.07G149400 Theobroma cacao HOM05D005571 ORTHO05D004433 1.2e-09 67.8 87 49.4
BcaC04g18579 Brassica carinata HOM05D005571 ORTHO05D006919 3.4e-09 66.2 173 35.3
C09p56960 Brassica napus HOM05D005571 ORTHO05D006919 3.4e-09 66.2 173 35.3
Thecc.06G128900 Theobroma cacao HOM05D005571 ORTHO05D006919 4.5e-09 65.9 79 50.6
BraA10t44107Z Brassica rapa HOM05D005571 ORTHO05D006919 2.9e-08 63.2 181 34.3
CDE05G1909 Ceratophyllum demersum HOM05D005571 ORTHO05D006919 1.9e-07 60.5 157 35.0
Thecc.04G308600 Theobroma cacao HOM05D005571 ORTHO05D006919 9.3e-07 58.2 76 51.3


User provided reference genes

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