Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN27G2637 Fragaria x ananassa HOM05D011213 ORTHO05D012867 4.4e-86 321.2 162 100.0
FvH4_1g29132 Fragaria vesca HOM05D000017 ORTHO05D000013 1.8e-55 219.5 159 74.8
FvH4_1g10352 Fragaria vesca HOM05D000017 ORTHO05D000013 1.1e-41 173.7 104 82.7
FvH4_6g39831 Fragaria vesca HOM05D000017 ORTHO05D000013 1.0e-26 124.0 112 56.2
FvH4_6g32522 Fragaria vesca HOM05D000017 ORTHO05D000013 4.0e-26 122.1 108 56.5
RcHm_v2.0_Chr5g0079641 Rosa chinensis HOM05D000017 ORTHO05D000013 4.0e-26 122.1 112 55.4
FvH4_6g25413 Fragaria vesca HOM05D000017 ORTHO05D000013 1.3e-24 117.1 167 45.5
FvH4_3g20431 Fragaria vesca HOM05D000017 ORTHO05D000013 3.7e-24 115.5 113 50.4
RcHm_v2.0_Chr7g0223891 Rosa chinensis HOM05D000017 ORTHO05D000013 6.3e-24 114.8 113 52.2
RcHm_v2.0_Chr6g0264981 Rosa chinensis HOM05D011213 ORTHO05D012867 3.8e-21 105.5 101 53.5
RcHm_v2.0_Chr1g0352521 Rosa chinensis HOM05D011213 ORTHO05D012867 4.2e-20 102.1 99 54.5
RcHm_v2.0_Chr6g0266931 Rosa chinensis HOM05D000017 ORTHO05D000013 1.2e-19 100.5 114 47.4
FAN17G1279 Fragaria x ananassa HOM05D011213 ORTHO05D012867 1.6e-19 100.1 99 51.5
RcHm_v2.0_Chr3g0494501 Rosa chinensis HOM05D011213 ORTHO05D012867 1.8e-18 96.7 106 49.1
FvH4_2g11355 Fragaria vesca HOM05D000017 ORTHO05D000013 5.2e-18 95.1 164 40.2
FvH4_3g31622 Fragaria vesca HOM05D008248 ORTHO05D010456 8.3e-16 87.8 110 43.6
FvH4_1g09982 Fragaria vesca HOM05D011213 ORTHO05D012867 1.9e-12 76.6 100 44.0
FAN08G1731 Fragaria x ananassa HOM05D008248 ORTHO05D012867 4.2e-12 75.5 119 37.8
FAN03G1157 Fragaria x ananassa HOM05D008248 ORTHO05D029481 1.4e-10 70.5 143 37.8
Prupe.8G015400 Prunus persica HOM05D011213 ORTHO05D012867 1.8e-10 70.1 143 32.9
FvH4_3g39962 Fragaria vesca HOM05D008813 ORTHO05D010456 2.0e-09 66.6 86 55.8
RcHm_v2.0_Chr5g0049571 Rosa chinensis HOM05D000017 ORTHO05D000013 7.5e-09 64.7 57 57.9
Prupe.1G164400 Prunus persica HOM05D008248 ORTHO05D012867 2.8e-08 62.8 99 40.4
ECA248G3125 Erigeron canadensis HOM05D000017 ORTHO05D000013 4.9e-08 62.0 114 32.5
ECA234G1768 Erigeron canadensis HOM05D000017 ORTHO05D000013 1.1e-07 60.8 79 38.0
ECA248G0537 Erigeron canadensis HOM05D000017 ORTHO05D000013 1.4e-07 60.5 79 36.7
FvH4_1g02991 Fragaria vesca HOM05D000017 ORTHO05D000013 1.4e-07 60.5 171 32.2
FvH4_1g21221 Fragaria vesca HOM05D008813 ORTHO05D010456 1.4e-07 60.5 84 53.6
FAN23G1537 Fragaria x ananassa HOM05D011213 ORTHO05D012867 1.4e-07 60.5 92 34.8
FAN23G2842 Fragaria x ananassa HOM05D011213 ORTHO05D012867 1.4e-07 60.5 92 34.8
ECA233G3352 Erigeron canadensis HOM05D000017 ORTHO05D000013 1.8e-07 60.1 79 35.4
FAN25G0130 Fragaria x ananassa HOM05D008248 ORTHO05D012867 1.8e-07 60.1 122 41.0
Sp7g12140 Schrenkiella parvula HOM05D000017 ORTHO05D017700 4.1e-07 58.9 90 33.3
ECA233G2055 Erigeron canadensis HOM05D000017 ORTHO05D000013 7.0e-07 58.2 74 40.5
Hma1.2p1_0787F.1_g217970 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.2e-06 57.4 79 35.4
Hma1.2p1_0181F.1_g079980 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.6e-06 57.0 74 33.8
FAN07G0949 Fragaria x ananassa HOM05D008248 ORTHO05D012867 2.0e-06 56.6 75 42.7
Hma1.2p1_0185F.1_g081470 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 2.0e-06 56.6 75 38.7
ECA233G3826 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.7e-06 56.2 110 31.8
Hma1.2p1_0400F.1_g144590 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 3.5e-06 55.8 75 40.0
Sed0005941 Sechium edule HOM05D000017 ORTHO05D000013 3.5e-06 55.8 73 38.4
ECA234G1503 Erigeron canadensis HOM05D001936 ORTHO05D002296 4.5e-06 55.5 79 32.9
FAN08G0624 Fragaria x ananassa HOM05D011213 ORTHO05D012867 4.5e-06 55.5 72 44.4
Hma1.2p1_0199F.1_g085640 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 4.5e-06 55.5 75 33.3
Hma1.2p1_1793F.1_g302600 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 4.5e-06 55.5 102 31.4
TWI09G1423 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 4.5e-06 55.5 75 33.3
FAN23G1189 Fragaria x ananassa HOM05D011213 ORTHO05D012867 7.7e-06 54.7 114 33.3
TPR.G28103 Trifolium pratense HOM05D000017 ORTHO05D000013 7.7e-06 54.7 88 31.8


User provided reference genes

Program Settings