Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN27G2528 Fragaria x ananassa HOM05D006027 ORTHO05D007604 4.3e-98 361.3 182 100.0
FAN15G2830 Fragaria x ananassa HOM05D006027 ORTHO05D007604 2.0e-95 352.4 182 97.3
FvH4_2g20470 Fragaria vesca HOM05D006027 ORTHO05D007604 5.9e-95 350.9 182 96.7
FAN24G3422 Fragaria x ananassa HOM05D006027 ORTHO05D007604 5.9e-95 350.9 182 96.7
Prupe.8G215000 Prunus persica HOM05D006027 ORTHO05D007604 2.2e-89 332.4 182 91.8
MD05G1188500 Malus domestica HOM05D006027 ORTHO05D007604 1.2e-87 326.6 182 90.7
MD10G1176000 Malus domestica HOM05D006027 ORTHO05D007604 1.6e-87 326.2 182 91.2
GSVIVG01028434001 Vitis vinifera HOM05D006027 ORTHO05D007604 4.4e-74 281.6 182 77.5
TAR633G0397 Trochodendron aralioides HOM05D006027 ORTHO05D007604 7.5e-74 280.8 184 78.3
Haze_24710 Corylus avellana HOM05D006027 ORTHO05D007604 7.0e-72 274.2 185 77.3
CANSAT01G0515 Cannabis sativa HOM05D006027 ORTHO05D007604 9.1e-72 273.9 184 75.5
Thecc.01G249800 Theobroma cacao HOM05D006027 ORTHO05D007604 2.7e-71 272.3 183 78.7
Gohir.A07G152700 Gossypium hirsutum HOM05D006027 ORTHO05D007604 2.2e-70 269.2 183 77.0
Dinv43066 Davidia involucrata HOM05D006027 ORTHO05D007604 2.9e-70 268.9 182 74.2
TAR362G0914 Trochodendron aralioides HOM05D006027 ORTHO05D007604 2.9e-70 268.9 184 76.1
Manes.12G038000 Manihot esculenta HOM05D006027 ORTHO05D007604 6.5e-70 267.7 182 76.9
Gorai.001G182100 Gossypium raimondii HOM05D006027 ORTHO05D007604 8.5e-70 267.3 183 76.5
Duzib138G0534 Durio zibethinus HOM05D006027 ORTHO05D007604 1.1e-69 266.9 184 78.3
CANSAT01G2333 Cannabis sativa HOM05D006027 ORTHO05D007604 1.5e-69 266.5 184 75.0
Gohir.D07G158900 Gossypium hirsutum HOM05D006027 ORTHO05D007604 1.5e-69 266.5 183 76.5
PSO764G0320 Papaver somniferum HOM05D006027 ORTHO05D007604 2.5e-69 265.8 186 74.2
Duzib211G0648 Durio zibethinus HOM05D006027 ORTHO05D007604 4.2e-69 265.0 183 76.0
CSS0012566 Camellia sinensis var. sinensis HOM05D006027 ORTHO05D007604 5.5e-69 264.6 182 73.6
CSS0010160 Camellia sinensis var. sinensis HOM05D006027 ORTHO05D007604 7.2e-69 264.2 182 73.6
QL09p041558 Quercus lobata HOM05D006027 ORTHO05D007604 7.2e-69 264.2 182 76.4
Manes.13G039500 Manihot esculenta HOM05D006027 ORTHO05D007604 2.7e-68 262.3 183 74.9
PSO832G0858 Papaver somniferum HOM05D006027 ORTHO05D007604 4.7e-68 261.5 185 73.5
Eucgr.K01424 Eucalyptus grandis HOM05D006027 ORTHO05D007604 6.1e-68 261.2 183 74.3
Aqoxy5G00130 Aquilegia oxysepala HOM05D006027 ORTHO05D007604 1.8e-67 259.6 185 73.0
Cfa002488 Carpinus fangiana HOM05D006027 ORTHO05D007604 3.0e-67 258.8 166 78.3
Atru.chr5.1865 Acer truncatum HOM05D006027 ORTHO05D007604 5.2e-67 258.1 182 72.5
Nn3g19801 Nelumbo nucifera HOM05D006027 ORTHO05D007604 2.0e-66 256.1 183 74.3
PGSC0003DMG400008585 Solanum tuberosum HOM05D006027 ORTHO05D007604 3.4e-66 255.4 182 73.6
Sopen09g025650 Solanum pennellii HOM05D006027 ORTHO05D007604 5.7e-66 254.6 182 73.1
Nitab4.5_0002435g0010 Nicotiana tabacum HOM05D006027 ORTHO05D007604 1.7e-65 253.1 182 72.5
PGR044G2038 Punica granatum HOM05D006027 ORTHO05D007604 1.7e-65 253.1 183 71.6
Solyc09g064500.3 Solanum lycopersicum HOM05D006027 ORTHO05D007604 1.7e-65 253.1 182 72.5
TWI18G0031 Tripterygium wilfordii HOM05D006027 ORTHO05D007604 2.2e-65 252.7 182 72.0
DCAR_000568 Daucus carota HOM05D006027 ORTHO05D007604 2.8e-65 252.3 182 72.0
Nitab4.5_0000845g0140 Nicotiana tabacum HOM05D006027 ORTHO05D007604 2.8e-65 252.3 182 72.5
Potri.002G256400 Populus trichocarpa HOM05D006027 ORTHO05D007604 2.8e-65 252.3 183 71.6
CAN.G536.12 Capsicum annuum HOM05D006027 ORTHO05D007604 3.7e-65 251.9 182 73.1
Sabra02G0194900 Salix brachista HOM05D006027 ORTHO05D007604 8.3e-65 250.8 182 70.3
vmacro14793 Vaccinium macrocarpon HOM05D006027 ORTHO05D007604 4.1e-64 248.4 182 72.5
Actinidia09513 Actinidia chinensis HOM05D006027 ORTHO05D007604 1.6e-63 246.5 182 71.4
Actinidia23700 Actinidia chinensis HOM05D006027 ORTHO05D007604 3.5e-63 245.4 182 70.9
SGA_v2.0_scaffold1G00660 Striga asiatica HOM05D006027 ORTHO05D007604 5.9e-63 244.6 187 71.1
Migut.D00479 Erythranthe guttata HOM05D006027 ORTHO05D007604 1.3e-62 243.4 184 71.7
Lalb_Chr06g0170731 Lupinus albus HOM05D006027 ORTHO05D007604 1.7e-62 243.0 182 72.5
Glyma.10G040600 Glycine max HOM05D006027 ORTHO05D007604 5.0e-62 241.5 182 70.3
Lj1C74G4 Lonicera japonica HOM05D006027 ORTHO05D007604 8.6e-62 240.7 158 77.2
Glyma.13G127200 Glycine max HOM05D006027 ORTHO05D007604 1.9e-61 239.6 182 70.3
Phvul.007G153500 Phaseolus vulgaris HOM05D006027 ORTHO05D007604 1.9e-61 239.6 182 70.9
VMungo0720G1620 Vigna mungo HOM05D006027 ORTHO05D007604 1.9e-61 239.6 182 70.9
MELO3C022393.2 Cucumis melo HOM05D006027 ORTHO05D007604 4.3e-61 238.4 184 67.9
MBI07_g08912_MAGBIO Magnolia biondii HOM05D006027 ORTHO05D007604 7.3e-61 237.7 184 69.0
Oeu015437.1 Olea europaea HOM05D006027 ORTHO05D007604 1.6e-60 236.5 157 75.8
Lalb_Chr02g0152741 Lupinus albus HOM05D006027 ORTHO05D007604 3.6e-60 235.3 182 68.7
Cc01_g17770 Coffea canephora HOM05D006027 ORTHO05D007604 6.1e-60 234.6 183 70.5
Rhsim01G0260300 Rhododendron simsii HOM05D006027 ORTHO05D007604 6.1e-60 234.6 152 77.0
CDE02G4364 Ceratophyllum demersum HOM05D006027 ORTHO05D007604 2.3e-59 232.6 183 68.3
ClCG06G001400 Citrullus lanatus HOM05D006027 ORTHO05D007604 3.0e-59 232.3 186 67.2
AUR62025437 Chenopodium quinoa HOM05D006027 ORTHO05D007604 5.2e-59 231.5 185 67.0
arahy.Tifrunner.gnm1.ann1.72UZ71 Arachis hypogaea HOM05D006027 ORTHO05D007604 6.8e-59 231.1 182 68.7
arahy.Tifrunner.gnm1.ann1.FRV526 Arachis hypogaea HOM05D006027 ORTHO05D007604 6.8e-59 231.1 182 68.7
HanXRQChr01g0014971 Helianthus annuus HOM05D006027 ORTHO05D007604 1.5e-58 229.9 189 66.1
Lsat_1_v5_gn_5_181161 Lactuca sativa HOM05D006027 ORTHO05D007604 1.5e-58 229.9 183 65.6
Lj5g0017558 Lotus japonicus HOM05D006027 ORTHO05D007604 4.4e-58 228.4 182 67.0
Medtr1g069465 Medicago truncatula HOM05D006027 ORTHO05D007604 7.5e-58 227.6 183 67.8
TPR.G5919 Trifolium pratense HOM05D006027 ORTHO05D007604 2.2e-57 226.1 183 68.9
Ciclev10022322m.g Citrus clementina HOM05D006027 ORTHO05D007604 2.9e-57 225.7 172 68.6
Hund18287 Selenicereus undatus HOM05D006027 ORTHO05D007604 3.7e-57 225.3 181 64.6
Oeu052083.1 Olea europaea HOM05D006027 ORTHO05D007604 1.1e-56 223.8 145 77.2
Ca_09646_v3 Cicer arietinum L. HOM05D006027 ORTHO05D007604 1.4e-56 223.4 182 67.6
Os01g0938100 Oryza sativa ssp. japonica HOM05D006027 ORTHO05D007604 9.2e-56 220.7 182 64.8
Psat6g062520 Pisum sativum HOM05D006027 ORTHO05D007604 2.7e-55 219.2 183 66.1
EL10Ac7g17691 Beta vulgaris HOM05D006027 ORTHO05D007604 3.5e-55 218.8 201 58.7
Phvul.001G165200 Phaseolus vulgaris HOM05D006027 ORTHO05D007604 7.8e-55 217.6 182 63.7
Sed0007731 Sechium edule HOM05D006027 ORTHO05D007604 1.3e-54 216.9 146 72.6
VMungo1383G1953 Vigna mungo HOM05D006027 ORTHO05D007604 3.9e-54 215.3 182 63.2
Peaxi162Scf00043g00255 Petunia axillaris HOM05D006027 ORTHO05D007604 1.1e-53 213.8 116 87.9
COL.COLO4_10205 Corchorus olitorius HOM05D006027 ORTHO05D007604 1.5e-53 213.4 114 88.6
AUR62008802 Chenopodium quinoa HOM05D006027 ORTHO05D007604 5.6e-53 211.5 132 78.0
ECA248G3782 Erigeron canadensis HOM05D006027 ORTHO05D007604 1.2e-52 210.3 162 65.4
Cpa.g.sc87.33 Carica papaya HOM05D006027 ORTHO05D007604 3.6e-52 208.8 115 85.2
SalBow4G0311 Salvia bowleyana HOM05D006027 ORTHO05D007604 4.7e-52 208.4 116 87.1
Sc05g0002880 Simmondsia chinensis HOM05D006027 ORTHO05D007604 4.7e-52 208.4 179 67.0
Aa31LG2G21720 Aethionema arabicum HOM05D006027 ORTHO05D007604 1.0e-51 207.2 184 59.8
HPP92_027289 Vanilla planifolia HOM05D006027 ORTHO05D007604 1.4e-51 206.8 152 64.5
BcaC06g32609 Brassica carinata HOM05D006027 ORTHO05D007604 6.8e-51 204.5 156 64.7
Zm00001eb141870 Zea mays HOM05D006027 ORTHO05D007604 6.8e-51 204.5 183 60.7
A01p09280 Brassica napus HOM05D006027 ORTHO05D007604 1.2e-50 203.8 158 63.9
CiPaw.03G271300 Carya illinoinensis HOM05D006027 ORTHO05D007604 2.0e-50 203.0 182 63.2
THA.LOC104814531 Tarenaya hassleriana HOM05D006027 ORTHO05D007604 2.6e-50 202.6 179 60.3
Zm00001eb141830 Zea mays HOM05D006027 ORTHO05D007604 2.6e-50 202.6 155 69.0
BraA01t00872Z Brassica rapa HOM05D006027 ORTHO05D007604 4.4e-50 201.8 182 60.4
CARHR236440 Cardamine hirsuta HOM05D006027 ORTHO05D007604 4.4e-50 201.8 163 62.6
Sp7g26630 Schrenkiella parvula HOM05D006027 ORTHO05D007604 7.5e-50 201.1 183 58.5
BcaNung04696 Brassica carinata HOM05D006027 ORTHO05D007604 1.7e-49 199.9 158 63.3
Thhalv10026347m.g Eutrema salsugineum HOM05D006027 ORTHO05D007604 1.7e-49 199.9 184 57.1
C01p10860 Brassica napus HOM05D006027 ORTHO05D007604 2.2e-49 199.5 157 61.8
A03p58340 Brassica napus HOM05D006027 ORTHO05D007604 2.9e-49 199.1 187 58.3
unitig_8.g3074 Utricularia gibba HOM05D006027 ORTHO05D007604 3.7e-49 198.7 151 66.2
C07p56360 Brassica napus HOM05D006027 ORTHO05D007604 4.9e-49 198.4 185 57.3
BolC7t46115H Brassica oleracea HOM05D006027 ORTHO05D007604 6.4e-49 198.0 185 57.3
THA.LOC104820068 Tarenaya hassleriana HOM05D006027 ORTHO05D007604 6.4e-49 198.0 182 61.5
Carub.0007s1200 Capsella rubella HOM05D006027 ORTHO05D007604 1.1e-48 197.2 154 62.3
HPP92_008468 Vanilla planifolia HOM05D006027 ORTHO05D007604 1.9e-48 196.4 179 59.2
AT4G28660 Arabidopsis thaliana HOM05D006027 ORTHO05D007604 3.2e-48 195.7 183 56.8
AL7G23880 Arabidopsis lyrata HOM05D006027 ORTHO05D007604 4.1e-48 195.3 184 57.1
ATR0787G157 Amborella trichopoda HOM05D006027 ORTHO05D007604 9.2e-48 194.1 115 80.0
BolC1t01050H Brassica oleracea HOM05D000022 ORTHO05D000744 2.0e-47 193.0 152 63.8
RcHm_v2.0_Chr6g0286561 Rosa chinensis HOM05D006027 ORTHO05D007604 2.7e-47 192.6 103 95.1
Mapoly0042s0085 Marchantia polymorpha HOM05D006027 ORTHO05D007604 3.9e-46 188.7 151 62.3
Pp3c7_5450 Physcomitrium patens HOM05D006027 ORTHO05D007604 1.2e-42 177.2 124 67.7
Pp3c11_18280 Physcomitrium patens HOM05D006027 ORTHO05D007604 2.9e-41 172.6 149 57.7
SMO347G0509 Selaginella moellendorffii HOM05D006027 ORTHO05D007604 2.9e-41 172.6 115 72.2
AagrBONN_evm.TU.Sc2ySwM_340.224 Anthoceros agrestis HOM05D006027 ORTHO05D007604 3.7e-41 172.2 108 73.1
MCO16G336 Micromonas commoda HOM05D006027 ORTHO05D007604 2.8e-36 156.0 117 59.8
Ah.15g092630 Amaranthus hybridus HOM05D006027 ORTHO05D007604 1.8e-35 153.3 125 63.2
CBR_g12742 Chara braunii HOM05D006027 ORTHO05D007604 2.3e-35 152.9 110 60.0
Cre10.g440450 Chlamydomonas reinhardtii HOM05D006027 ORTHO05D007604 4.0e-35 152.1 108 63.0
PRCOL_00005949 Prasinoderma coloniale HOM05D006027 ORTHO05D007604 2.6e-34 149.4 106 62.3
CSS0017427 Camellia sinensis var. sinensis HOM05D006027 ORTHO05D007604 3.4e-26 122.5 170 45.9
Zm00001eb141750 Zea mays HOM05D006027 ORTHO05D007604 2.8e-20 102.8 59 79.7
Zm00001eb141790 Zea mays HOM05D006027 ORTHO05D007604 2.8e-20 102.8 59 79.7
TAR362G0025 Trochodendron aralioides HOM05D006027 ORTHO05D007604 1.1e-19 100.9 68 75.0
CDE09G0356 Ceratophyllum demersum HOM05D006027 ORTHO05D007604 2.4e-19 99.8 112 56.2
Zm00001eb141760 Zea mays HOM05D006027 ORTHO05D007604 1.2e-15 87.4 49 85.7


User provided reference genes

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