Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN27G2480 Fragaria x ananassa HOM05D000003 ORTHO05D011454 7.9e-67 256.9 125 100.0
FAN12G3088 Fragaria x ananassa HOM05D000003 ORTHO05D011454 2.0e-65 252.3 125 98.4
FvH4_5g37180 Fragaria vesca HOM05D000003 ORTHO05D011454 1.7e-64 249.2 125 97.6
FAN18G3558 Fragaria x ananassa HOM05D000003 ORTHO05D011454 2.8e-64 248.4 125 97.6
FvH4_5g38981 Fragaria vesca HOM05D000003 ORTHO05D011454 8.5e-53 210.3 111 93.7
FAN27G1125 Fragaria x ananassa HOM05D001311 ORTHO05D011454 1.1e-36 156.8 114 71.1
RcHm_v2.0_Chr1g0345991 Rosa chinensis HOM05D000003 ORTHO05D011454 5.5e-36 154.5 120 57.5
FAN01G2727 Fragaria x ananassa HOM05D000003 ORTHO05D011454 2.8e-35 152.1 121 53.7
FAN09G1860 Fragaria x ananassa HOM05D000003 ORTHO05D011454 3.4e-33 145.2 114 53.5
RcHm_v2.0_Chr4g0402201 Rosa chinensis HOM05D000003 ORTHO05D000004 2.5e-28 129.0 120 48.3
RcHm_v2.0_Chr3g0488841 Rosa chinensis HOM05D000003 ORTHO05D011454 2.1e-27 125.9 120 50.0
FvH4_3g14231 Fragaria vesca HOM05D000003 ORTHO05D011454 1.5e-25 119.8 118 45.8
FvH4_4g13062 Fragaria vesca HOM05D000003 ORTHO05D011454 2.0e-25 119.4 118 44.9
FAN28G2422 Fragaria x ananassa HOM05D000003 ORTHO05D011454 2.0e-25 119.4 118 44.9
FAN11G2147 Fragaria x ananassa HOM05D000003 ORTHO05D011454 1.9e-23 112.8 119 44.5
FAN21G2491 Fragaria x ananassa HOM05D000003 ORTHO05D011454 4.1e-23 111.7 119 44.5
FAN13G0138 Fragaria x ananassa HOM05D004906 ORTHO05D005926 6.0e-22 107.8 81 63.0
FAN20G3133 Fragaria x ananassa HOM05D000003 ORTHO05D011454 7.3e-20 100.9 105 42.9
FAN13G1930 Fragaria x ananassa HOM05D000003 ORTHO05D011454 2.8e-19 99.0 102 42.2
FAN05G0783 Fragaria x ananassa HOM05D000003 ORTHO05D011454 2.3e-18 95.9 98 45.9
RcHm_v2.0_Chr6g0289791 Rosa chinensis HOM05D000003 ORTHO05D011454 2.0e-17 92.8 114 40.4
RcHm_v2.0_Chr5g0066251 Rosa chinensis HOM05D000003 ORTHO05D011454 9.8e-17 90.5 117 37.6
FAN08G1917 Fragaria x ananassa HOM05D000003 ORTHO05D011454 3.7e-16 88.6 94 41.5
FAN19G1136 Fragaria x ananassa HOM05D000003 ORTHO05D011454 3.5e-14 82.0 89 42.7
FvH4_5g25821 Fragaria vesca HOM05D000003 ORTHO05D011454 1.3e-13 80.1 118 34.7
FvH4_2g13111 Fragaria vesca HOM05D000003 ORTHO05D011274 1.5e-12 76.6 122 31.1
FAN17G2412 Fragaria x ananassa HOM05D000003 ORTHO05D011454 1.4e-10 70.1 73 42.5
FAN07G1898 Fragaria x ananassa HOM05D000003 ORTHO05D011454 3.1e-10 68.9 70 48.6
FvH4_7g03001 Fragaria vesca HOM05D010636 ORTHO05D011274 1.5e-09 66.6 120 30.0
QL93p0138_0008 Quercus lobata HOM05D000003 ORTHO05D000167 3.4e-09 65.5 122 30.3
Dinv24219 Davidia involucrata HOM05D000003 ORTHO05D011454 7.5e-09 64.3 97 33.0
Atru.chr13.2074 Acer truncatum HOM05D000003 ORTHO05D000167 1.7e-08 63.2 123 28.5
CANSAT25G1265 Cannabis sativa HOM05D000003 ORTHO05D000167 3.7e-08 62.0 117 28.2
FAN24G1917 Fragaria x ananassa HOM05D000011 ORTHO05D000157 3.7e-08 62.0 134 29.9
Dinv21289 Davidia involucrata HOM05D000079 ORTHO05D000211 6.4e-08 61.2 94 33.0
Dinv32432 Davidia involucrata HOM05D000003 ORTHO05D011454 6.4e-08 61.2 111 27.9
FvH4_2g19503 Fragaria vesca HOM05D000003 ORTHO05D006737 2.4e-07 59.3 98 29.6
Atru.chr8.822 Acer truncatum HOM05D000003 ORTHO05D000167 3.2e-07 58.9 116 29.3
FvH4_1g19421 Fragaria vesca HOM05D000003 ORTHO05D006737 3.2e-07 58.9 102 29.4
Sed0015376 Sechium edule HOM05D000003 ORTHO05D000167 3.2e-07 58.9 99 29.3
Sed0002454 Sechium edule HOM05D000003 ORTHO05D000167 4.1e-07 58.5 99 29.3
CANSAT21G2476 Cannabis sativa HOM05D000003 ORTHO05D000004 9.2e-07 57.4 120 30.8
CANSAT37G0018 Cannabis sativa HOM05D000003 ORTHO05D000167 9.2e-07 57.4 117 29.9
Sed0026194 Sechium edule HOM05D000003 ORTHO05D000167 9.2e-07 57.4 97 27.8
Sed0027684 Sechium edule HOM05D000003 ORTHO05D000167 9.2e-07 57.4 99 28.3
Dinv37210 Davidia involucrata HOM05D000003 ORTHO05D000167 1.6e-06 56.6 111 27.9
QL10p056321 Quercus lobata HOM05D000003 ORTHO05D000167 1.6e-06 56.6 117 26.5
Dinv08495 Davidia involucrata HOM05D000003 ORTHO05D000167 2.7e-06 55.8 77 36.4
FAN18G2675 Fragaria x ananassa HOM05D010636 ORTHO05D011274 2.7e-06 55.8 68 38.2
CANSAT21G2268 Cannabis sativa HOM05D000003 ORTHO05D000167 3.5e-06 55.5 111 28.8
CANSAT64G2222 Cannabis sativa HOM05D000003 ORTHO05D000004 4.6e-06 55.1 119 31.1
Duzib132G0669 Durio zibethinus HOM05D000003 ORTHO05D000167 4.6e-06 55.1 105 28.6
Atru.chr13.1861 Acer truncatum HOM05D000003 ORTHO05D000167 6.0e-06 54.7 119 26.1
CANSAT78G2307 Cannabis sativa HOM05D000003 ORTHO05D000167 6.0e-06 54.7 119 31.9
FAN27G1320 Fragaria x ananassa HOM05D000003 ORTHO05D006737 6.0e-06 54.7 94 27.7


User provided reference genes

Program Settings