Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN27G2436 Fragaria x ananassa HOM05D006059 ORTHO05D010613 1.8e-141 505.8 235 100.0
FAN25G3455 Fragaria x ananassa HOM05D006059 ORTHO05D207604 3.7e-134 481.5 235 96.2
FAN02G0158 Fragaria x ananassa HOM05D006059 ORTHO05D207876 1.9e-114 416.0 248 83.1
FAN18G3353 Fragaria x ananassa HOM05D006059 ORTHO05D010613 5.5e-85 318.2 154 95.5
FvH4_3g36310 Fragaria vesca HOM05D006059 ORTHO05D000610 2.1e-84 316.2 234 69.2
FAN12G1423 Fragaria x ananassa HOM05D006059 ORTHO05D010613 1.7e-78 296.6 161 90.7
FAN06G2872 Fragaria x ananassa HOM05D006059 ORTHO05D010613 3.3e-74 282.3 154 89.0
FAN05G3551 Fragaria x ananassa HOM05D006059 ORTHO05D202697 1.8e-72 276.6 207 69.6
FAN03G3178 Fragaria x ananassa HOM05D006059 ORTHO05D022634 4.5e-71 271.9 235 61.7
FvH4_6g48101 Fragaria vesca HOM05D006059 ORTHO05D198592 1.8e-64 250.0 224 59.4
FvH4_6g02080 Fragaria vesca HOM05D006059 ORTHO05D022634 1.0e-51 207.6 235 53.6
FAN08G3607 Fragaria x ananassa HOM05D006059 ORTHO05D211013 1.0e-51 207.6 100 95.0
FAN09G3980 Fragaria x ananassa HOM05D006059 ORTHO05D022634 3.1e-48 196.1 235 49.4
FAN25G3073 Fragaria x ananassa HOM05D006059 ORTHO05D022634 1.6e-47 193.7 235 50.6
FAN24G2449 Fragaria x ananassa HOM05D006059 ORTHO05D207803 1.9e-45 186.8 134 71.6
FAN17G1384 Fragaria x ananassa HOM05D006059 ORTHO05D201010 2.5e-45 186.4 192 58.9
FAN10G4265 Fragaria x ananassa HOM05D006059 ORTHO05D022634 2.1e-44 183.3 92 93.5
FAN19G3119 Fragaria x ananassa HOM05D006059 ORTHO05D022634 1.1e-42 177.6 101 85.1
FAN02G0484 Fragaria x ananassa HOM05D006059 ORTHO05D207202 2.8e-41 172.9 150 65.3
FAN12G0752 Fragaria x ananassa HOM05D006059 ORTHO05D204696 4.7e-36 155.6 171 52.0
FvH4_6g18410 Fragaria vesca HOM05D006059 ORTHO05D010613 2.3e-35 153.3 135 63.0
FAN11G1542 Fragaria x ananassa HOM05D006059 ORTHO05D210510 4.0e-35 152.5 100 78.0
FvH4_6g37922 Fragaria vesca HOM05D006059 ORTHO05D010613 2.2e-33 146.7 154 51.3
FAN13G1777 Fragaria x ananassa HOM05D006059 ORTHO05D201876 1.6e-31 140.6 192 46.9
FAN09G3528 Fragaria x ananassa HOM05D006059 ORTHO05D010613 2.0e-31 140.2 137 59.1
FAN14G0698 Fragaria x ananassa HOM05D006059 ORTHO05D010613 5.9e-31 138.7 201 45.3
FAN11G1312 Fragaria x ananassa HOM05D006059 ORTHO05D010613 7.7e-31 138.3 135 59.3
FAN10G3573 Fragaria x ananassa HOM05D006059 ORTHO05D019147 1.7e-30 137.1 179 52.5
FvH4_5g18320 Fragaria vesca HOM05D006059 ORTHO05D010613 2.9e-30 136.3 137 59.1
FAN05G4414 Fragaria x ananassa HOM05D006059 ORTHO05D200847 2.9e-30 136.3 229 43.7
FAN16G3677 Fragaria x ananassa HOM05D006059 ORTHO05D010613 6.5e-30 135.2 135 57.8
FAN02G0790 Fragaria x ananassa HOM05D006059 ORTHO05D010613 8.5e-30 134.8 135 57.8
FAN03G0148 Fragaria x ananassa HOM05D006059 ORTHO05D010613 8.5e-30 134.8 137 59.1
FAN13G2239 Fragaria x ananassa HOM05D006059 ORTHO05D010613 8.5e-30 134.8 135 57.8
FAN05G2015 Fragaria x ananassa HOM05D006059 ORTHO05D010613 1.1e-29 134.4 134 56.7
FAN06G3421 Fragaria x ananassa HOM05D006059 ORTHO05D010613 1.9e-29 133.7 136 58.1
FAN03G3436 Fragaria x ananassa HOM05D006059 ORTHO05D010613 2.5e-29 133.3 134 56.7
FAN16G0265 Fragaria x ananassa HOM05D006059 ORTHO05D010613 5.5e-29 132.1 135 57.8
FAN14G3214 Fragaria x ananassa HOM05D006059 ORTHO05D010613 9.5e-29 131.3 133 56.4
FAN18G2462 Fragaria x ananassa HOM05D006059 ORTHO05D010613 9.5e-29 131.3 137 57.7
FAN14G3910 Fragaria x ananassa HOM05D006059 ORTHO05D010613 2.7e-28 129.8 137 56.9
FvH4_5g36190 Fragaria vesca HOM05D006059 ORTHO05D046011 4.7e-28 129.0 152 53.3
FAN09G3926 Fragaria x ananassa HOM05D006059 ORTHO05D203141 1.8e-27 127.1 140 53.6
FAN06G3136 Fragaria x ananassa HOM05D006059 ORTHO05D202002 3.0e-27 126.3 232 38.8
FAN01G0206 Fragaria x ananassa HOM05D006059 ORTHO05D207853 7.5e-26 121.7 55 98.2
FAN03G2752 Fragaria x ananassa HOM05D006059 ORTHO05D010613 1.3e-25 120.9 135 54.8
FAN14G1746 Fragaria x ananassa HOM05D006059 ORTHO05D010613 2.8e-25 119.8 116 59.5
FAN11G2691 Fragaria x ananassa HOM05D006059 ORTHO05D010613 6.6e-22 108.6 135 51.1
FvH4_5g09320 Fragaria vesca HOM05D006059 ORTHO05D010613 8.6e-22 108.2 112 55.4
FAN01G0864 Fragaria x ananassa HOM05D006059 ORTHO05D019147 5.6e-21 105.5 90 62.2
FAN12G1586 Fragaria x ananassa HOM05D006059 ORTHO05D010613 2.1e-20 103.6 104 58.7
RcHm_v2.0_Chr5g0057351 Rosa chinensis HOM05D006059 ORTHO05D010613 1.4e-19 100.9 112 47.3
RcHm_v2.0_Chr2g0161601 Rosa chinensis HOM05D006059 ORTHO05D010613 1.8e-19 100.5 112 46.4
FAN03G1768 Fragaria x ananassa HOM05D006059 ORTHO05D207149 1.5e-18 97.4 119 47.9
RcHm_v2.0_Chr6g0279821 Rosa chinensis HOM05D006059 ORTHO05D010613 2.6e-18 96.7 106 46.2
FAN12G2113 Fragaria x ananassa HOM05D006059 ORTHO05D004950 3.4e-18 96.3 139 48.2
FAN14G0874 Fragaria x ananassa HOM05D002480 ORTHO05D003145 5.7e-18 95.5 102 53.9
FAN06G1974 Fragaria x ananassa HOM05D006059 ORTHO05D010613 9.8e-18 94.7 139 46.0
FAN18G2895 Fragaria x ananassa HOM05D006059 ORTHO05D010613 9.8e-18 94.7 85 61.2
FAN11G3819 Fragaria x ananassa HOM05D006059 ORTHO05D209325 1.3e-17 94.4 61 75.4
FAN08G1991 Fragaria x ananassa HOM05D006059 ORTHO05D208958 3.7e-17 92.8 108 49.1
FAN05G3510 Fragaria x ananassa HOM05D006059 ORTHO05D203405 1.4e-16 90.9 67 71.6
FAN05G3127 Fragaria x ananassa HOM05D006059 ORTHO05D208470 7.0e-16 88.6 141 44.7
RcHm_v2.0_Chr7g0227101 Rosa chinensis HOM05D006059 ORTHO05D010613 2.7e-15 86.7 96 47.9
FAN25G1404 Fragaria x ananassa HOM05D006059 ORTHO05D010613 1.7e-14 84.0 79 58.2
FvH4_5g36660 Fragaria vesca HOM05D006059 ORTHO05D010613 5.0e-14 82.4 79 59.5
FAN05G1577 Fragaria x ananassa HOM05D006059 ORTHO05D010613 5.0e-14 82.4 79 59.5
FAN08G2764 Fragaria x ananassa HOM05D006059 ORTHO05D010613 6.6e-14 82.0 79 59.5
FAN10G0384 Fragaria x ananassa HOM05D006059 ORTHO05D010613 6.6e-14 82.0 79 59.5
FAN13G2711 Fragaria x ananassa HOM05D006059 ORTHO05D010613 6.6e-14 82.0 79 59.5
FAN21G0235 Fragaria x ananassa HOM05D006059 ORTHO05D010613 6.6e-14 82.0 83 56.6
FAN24G0852 Fragaria x ananassa HOM05D006059 ORTHO05D010613 6.6e-14 82.0 78 59.0
RcHm_v2.0_Chr2g0116941 Rosa chinensis HOM05D021305 ORTHO05D010102 1.9e-13 80.5 147 38.8
FAN14G4559 Fragaria x ananassa HOM05D006059 ORTHO05D209534 2.5e-13 80.1 87 51.7
FAN27G3382 Fragaria x ananassa HOM05D006059 ORTHO05D010613 2.5e-13 80.1 79 58.2
FAN14G0222 Fragaria x ananassa HOM05D006059 ORTHO05D010613 3.3e-13 79.7 79 58.2
FAN10G1186 Fragaria x ananassa HOM05D006059 ORTHO05D010613 4.3e-13 79.3 74 59.5
FAN06G3448 Fragaria x ananassa HOM05D006059 ORTHO05D010613 5.6e-13 79.0 79 58.2
FAN05G4633 Fragaria x ananassa HOM05D006059 ORTHO05D003448 9.5e-13 78.2 79 58.2
FAN06G3209 Fragaria x ananassa HOM05D006059 ORTHO05D010613 1.2e-12 77.8 79 57.0
RcHm_v2.0_Chr7g0195521 Rosa chinensis HOM05D013926 ORTHO05D020985 1.6e-12 77.4 144 37.5
FAN09G4425 Fragaria x ananassa HOM05D006059 ORTHO05D010613 2.1e-12 77.0 73 58.9
RcHm_v2.0_Chr4g0388241 Rosa chinensis HOM05D013926 ORTHO05D020985 3.6e-12 76.3 189 33.9
FAN03G2842 Fragaria x ananassa HOM05D006059 ORTHO05D200669 4.7e-12 75.9 54 66.7
RcHm_v2.0_Chr2g0175631 Rosa chinensis HOM05D013926 ORTHO05D020985 4.7e-12 75.9 189 33.9
FAN06G3983 Fragaria x ananassa HOM05D006059 ORTHO05D010613 6.2e-12 75.5 79 57.0
FAN14G4872 Fragaria x ananassa HOM05D006059 ORTHO05D010613 1.4e-11 74.3 79 57.0
FAN18G4115 Fragaria x ananassa HOM05D005804 ORTHO05D006849 1.4e-11 74.3 94 50.0
RcHm_v2.0_Chr1g0363721 Rosa chinensis HOM05D018137 ORTHO05D343934 1.4e-11 74.3 218 30.7
FAN05G2589 Fragaria x ananassa HOM05D000079 ORTHO05D000211 1.8e-11 73.9 47 76.6
FAN09G0864 Fragaria x ananassa HOM05D006059 ORTHO05D207160 1.8e-11 73.9 103 43.7
FAN14G4965 Fragaria x ananassa HOM05D006059 ORTHO05D010613 1.8e-11 73.9 103 48.5
FAN07G2379 Fragaria x ananassa HOM05D006059 ORTHO05D019147 5.2e-11 72.4 98 45.9
FAN04G2861 Fragaria x ananassa HOM05D006059 ORTHO05D210609 6.8e-11 72.0 45 75.6
FAN10G0957 Fragaria x ananassa HOM05D006059 ORTHO05D010613 6.8e-11 72.0 74 56.8
FAN02G1039 Fragaria x ananassa HOM05D006059 ORTHO05D210069 1.5e-10 70.9 73 57.5
FAN05G0105 Fragaria x ananassa HOM05D006059 ORTHO05D204564 1.3e-09 67.8 46 67.4
FAN24G1658 Fragaria x ananassa HOM05D006059 ORTHO05D209653 2.2e-09 67.0 147 35.4
FAN28G0623 Fragaria x ananassa HOM05D006059 ORTHO05D010613 3.7e-09 66.2 59 62.7
RcHm_v2.0_Chr5g0011621 Rosa chinensis HOM05D013926 ORTHO05D020985 3.7e-09 66.2 238 29.8
FAN06G4655 Fragaria x ananassa HOM05D006059 ORTHO05D010613 1.4e-08 64.3 61 57.4
FAN10G1069 Fragaria x ananassa HOM05D033044 ORTHO05D207370 1.4e-08 64.3 50 64.0
FAN06G0639 Fragaria x ananassa HOM05D006059 ORTHO05D010613 1.9e-08 63.9 101 43.6
FAN26G1598 Fragaria x ananassa HOM05D006059 ORTHO05D203524 7.0e-08 62.0 45 66.7
FAN06G1279 Fragaria x ananassa HOM05D033044 ORTHO05D200869 1.2e-07 61.2 45 64.4
FAN02G0672 Fragaria x ananassa HOM05D006059 ORTHO05D208317 2.7e-07 60.1 46 63.0
RcHm_v2.0_Chr6g0282921 Rosa chinensis HOM05D021305 ORTHO05D342053 3.5e-07 59.7 79 48.1
FAN20G0216 Fragaria x ananassa HOM05D006059 ORTHO05D202114 4.6e-07 59.3 46 63.0
FAN20G3195 Fragaria x ananassa HOM05D064877 ORTHO05D206928 4.6e-07 59.3 62 56.5
FAN27G2494 Fragaria x ananassa HOM05D006059 ORTHO05D205312 3.0e-06 56.6 35 71.4
RcHm_v2.0_Chr7g0185391 Rosa chinensis HOM05D013926 ORTHO05D020985 3.0e-06 56.6 117 37.6


User provided reference genes

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