Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN27G2430 Fragaria x ananassa HOM05D005141 ORTHO05D006250 9.4e-248 859.8 440 100.0
FAN15G0409 Fragaria x ananassa HOM05D005141 ORTHO05D006250 3.8e-241 837.8 440 97.3
FAN20G1096 Fragaria x ananassa HOM05D005141 ORTHO05D006250 1.6e-239 832.4 440 97.7
FAN24G3348 Fragaria x ananassa HOM05D005141 ORTHO05D006250 8.0e-239 830.1 440 96.4
RcHm_v2.0_Chr6g0312851 Rosa chinensis HOM05D005141 ORTHO05D006250 1.2e-223 779.6 443 91.9
Prupe.1G467500 Prunus persica HOM05D005141 ORTHO05D006250 6.0e-186 654.4 443 78.3
FvH4_2g30050 Fragaria vesca HOM05D005141 ORTHO05D006250 9.3e-179 630.6 334 96.7
MD15G1116100 Malus domestica HOM05D005141 ORTHO05D006250 2.5e-176 622.5 454 74.0
MD08G1137500 Malus domestica HOM05D005141 ORTHO05D006250 1.6e-175 619.8 450 74.9
CiPaw.07G218200 Carya illinoinensis HOM05D005141 ORTHO05D006250 5.1e-145 518.5 444 65.3
Cfa021484 Carpinus fangiana HOM05D005141 ORTHO05D006250 1.1e-142 510.8 415 66.5
CiPaw.08G014900 Carya illinoinensis HOM05D005141 ORTHO05D006250 5.9e-141 505.0 444 63.5
CANSAT25G3062 Cannabis sativa HOM05D005141 ORTHO05D006250 1.0e-137 494.2 424 65.6
Potri.018G033700 Populus trichocarpa HOM05D005141 ORTHO05D006250 1.4e-137 493.8 407 65.6
Sabra18G0034600 Salix brachista HOM05D005141 ORTHO05D006250 1.5e-136 490.3 404 65.1
GSVIVG01035797001 Vitis vinifera HOM05D005141 ORTHO05D006250 3.3e-136 489.2 416 64.4
Haze_21614 Corylus avellana HOM05D005141 ORTHO05D006250 1.7e-135 486.9 434 63.4
QL12p031441 Quercus lobata HOM05D005141 ORTHO05D006250 1.6e-133 480.3 411 64.2
Sabra06G0193700 Salix brachista HOM05D005141 ORTHO05D006250 2.2e-132 476.5 416 64.4
Manes.03G065500 Manihot esculenta HOM05D005141 ORTHO05D006250 7.2e-131 471.5 410 63.9
Dinv30204 Davidia involucrata HOM05D005141 ORTHO05D006250 1.2e-130 470.7 446 60.5
TWI32G0021 Tripterygium wilfordii HOM05D005141 ORTHO05D006250 3.6e-130 469.2 453 59.2
Manes.16G067800 Manihot esculenta HOM05D005141 ORTHO05D006250 1.3e-127 460.7 418 62.0
Thecc.09G145300 Theobroma cacao HOM05D005141 ORTHO05D006250 1.0e-124 451.1 451 58.3
Ciclev10008356m.g Citrus clementina HOM05D005141 ORTHO05D006250 8.0e-122 441.4 443 56.0
Duzib187G0541 Durio zibethinus HOM05D005141 ORTHO05D006250 8.3e-119 431.4 449 56.6
TWI34G0135 Tripterygium wilfordii HOM05D005141 ORTHO05D006250 3.1e-118 429.5 357 64.4
Ca_15703_v3 Cicer arietinum L. HOM05D005141 ORTHO05D006250 7.0e-118 428.3 442 55.4
Phvul.009G097300 Phaseolus vulgaris HOM05D005141 ORTHO05D006250 4.5e-117 425.6 435 54.5
Lj1g0018494 Lotus japonicus HOM05D005141 ORTHO05D006250 1.3e-116 424.1 438 55.5
TAR383G0458 Trochodendron aralioides HOM05D005141 ORTHO05D006250 1.3e-116 424.1 447 55.9
Atru.chr7.2334 Acer truncatum HOM05D005141 ORTHO05D006250 3.8e-116 422.5 414 58.7
Glyma.06G072700 Glycine max HOM05D005141 ORTHO05D006250 3.8e-116 422.5 436 54.8
Glyma.04G071400 Glycine max HOM05D005141 ORTHO05D006250 8.6e-116 421.4 436 54.4
Medtr3g107950 Medicago truncatula HOM05D005141 ORTHO05D006250 1.1e-115 421.0 400 58.2
Duzib150G1154 Durio zibethinus HOM05D005141 ORTHO05D006250 4.2e-115 419.1 487 52.8
TPR.G34685 Trifolium pratense HOM05D005141 ORTHO05D006250 7.2e-115 418.3 404 57.4
Nn2g11855 Nelumbo nucifera HOM05D005141 ORTHO05D006250 2.1e-114 416.8 452 54.2
VMungo1309G3073 Vigna mungo HOM05D005141 ORTHO05D006250 2.1e-114 416.8 435 54.0
TAR626G1320 Trochodendron aralioides HOM05D005141 ORTHO05D006250 5.2e-113 412.1 448 55.4
Gorai.009G011200 Gossypium raimondii HOM05D005141 ORTHO05D006250 1.2e-112 411.0 450 55.1
Eucgr.C01809 Eucalyptus grandis HOM05D005141 ORTHO05D006250 2.6e-112 409.8 411 54.7
Duzib168G0094 Durio zibethinus HOM05D005141 ORTHO05D006250 9.8e-112 407.9 445 55.1
Hma1.2p1_0175F.1_g077130 Hydrangea macrophylla HOM05D005141 ORTHO05D006250 2.8e-111 406.4 443 54.9
Potri.006G247500 Populus trichocarpa HOM05D005141 ORTHO05D006250 5.0e-108 395.6 305 69.2
ClCG08G012940 Citrullus lanatus HOM05D005141 ORTHO05D006250 1.1e-107 394.4 443 54.6
TAR636G0300 Trochodendron aralioides HOM05D005141 ORTHO05D006250 1.6e-106 390.6 457 53.8
PGSC0003DMG400026089 Solanum tuberosum HOM05D005141 ORTHO05D006250 3.6e-106 389.4 416 53.4
Lj7A714G44 Lonicera japonica HOM05D005141 ORTHO05D006250 1.4e-105 387.5 352 59.9
Lalb_Chr23g0268881 Lupinus albus HOM05D005141 ORTHO05D006250 4.0e-105 386.0 410 54.4
Solyc06g065650.3 Solanum lycopersicum HOM05D005141 ORTHO05D006250 3.4e-104 382.9 427 51.5
Sopen06g024010 Solanum pennellii HOM05D005141 ORTHO05D006250 2.2e-103 380.2 432 50.9
CAN.G199.28 Capsicum annuum HOM05D005141 ORTHO05D006250 4.9e-103 379.0 406 53.4
Sed0000645 Sechium edule HOM05D005141 ORTHO05D006250 4.1e-102 375.9 450 52.2
Actinidia13429 Actinidia chinensis HOM05D005141 ORTHO05D006250 6.0e-101 372.1 422 51.4
arahy.Tifrunner.gnm1.ann1.WUI646 Arachis hypogaea HOM05D005141 ORTHO05D006250 1.5e-99 367.5 379 54.9
vmacro11124 Vaccinium macrocarpon HOM05D005141 ORTHO05D006250 3.6e-98 362.8 480 47.3
Nitab4.5_0005873g0030 Nicotiana tabacum HOM05D005141 ORTHO05D006250 1.7e-95 354.0 417 49.6
Gohir.A05G010100 Gossypium hirsutum HOM05D005141 ORTHO05D006250 2.2e-95 353.6 449 49.9
Nitab4.5_0011669g0010 Nicotiana tabacum HOM05D005141 ORTHO05D006250 1.9e-94 350.5 417 49.4
arahy.Tifrunner.gnm1.ann1.29TRSQ Arachis hypogaea HOM05D005141 ORTHO05D006250 5.4e-94 349.0 417 49.9
MELO3C011217.2 Cucumis melo HOM05D005141 ORTHO05D006250 1.6e-93 347.4 466 48.1
DCAR_022871 Daucus carota HOM05D005141 ORTHO05D006250 6.0e-93 345.5 413 51.1
Cc08_g08010 Coffea canephora HOM05D005141 ORTHO05D006250 1.3e-92 344.4 442 47.7
Gohir.D05G010800 Gossypium hirsutum HOM05D005141 ORTHO05D006250 1.3e-92 344.4 449 49.4
PSO782G1260 Papaver somniferum HOM05D005141 ORTHO05D006250 5.1e-92 342.4 428 50.7
COL.COLO4_24046 Corchorus olitorius HOM05D005141 ORTHO05D006250 8.6e-92 341.7 288 62.5
Lalb_Chr08g0243831 Lupinus albus HOM05D005141 ORTHO05D006250 3.3e-91 339.7 428 49.1
Peaxi162Scf00545g00034 Petunia axillaris HOM05D005141 ORTHO05D006250 4.7e-90 335.9 434 47.7
Cpa.g.sc91.20 Carica papaya HOM05D005141 ORTHO05D006250 1.8e-89 334.0 337 57.3
MBI04_g39529_MAGBIO Magnolia biondii HOM05D005141 ORTHO05D006250 8.9e-89 331.6 411 49.4
Nn8g39307 Nelumbo nucifera HOM05D005141 ORTHO05D006250 5.8e-88 328.9 342 56.1
Rhsim02G0188600 Rhododendron simsii HOM05D005141 ORTHO05D006250 4.9e-87 325.9 311 57.2
ECA233G0036 Erigeron canadensis HOM05D005141 ORTHO05D006250 3.9e-84 316.2 407 50.6
SalBow4G0713 Salvia bowleyana HOM05D005141 ORTHO05D006250 8.1e-82 308.5 299 57.5
MSTRG.25868 Avicennia marina HOM05D005141 ORTHO05D006250 2.4e-81 307.0 385 50.1
Actinidia13280 Actinidia chinensis HOM05D005141 ORTHO05D006250 2.0e-80 303.9 290 58.3
PGR031G2456 Punica granatum HOM05D005141 ORTHO05D006250 3.8e-79 299.7 439 44.4
PSO063G0687 Papaver somniferum HOM05D005141 ORTHO05D006250 2.4e-78 297.0 427 47.1
Dinv11587 Davidia involucrata HOM05D005141 ORTHO05D006250 1.2e-77 294.7 262 61.5
HanXRQChr02g0050641 Helianthus annuus HOM05D005141 ORTHO05D006250 3.5e-77 293.1 374 51.1
Sed0008448 Sechium edule HOM05D005141 ORTHO05D006250 4.3e-75 286.2 404 45.8
ClCG05G017130 Citrullus lanatus HOM05D005141 ORTHO05D006250 1.3e-74 284.6 416 45.7
Psat0s1782g0240 Pisum sativum HOM05D005141 ORTHO05D006250 3.1e-73 280.0 310 51.3
MBI01_g37337_MAGBIO Magnolia biondii HOM05D005141 ORTHO05D006250 4.0e-73 279.6 312 52.6
Migut.A00282 Erythranthe guttata HOM05D005141 ORTHO05D006250 1.3e-71 274.6 402 47.3
Oeu014659.3 Olea europaea HOM05D005141 ORTHO05D006250 2.9e-71 273.5 383 45.7
Oeu032487.3 Olea europaea HOM05D005141 ORTHO05D006250 4.9e-71 272.7 327 50.5
Lsat_1_v5_gn_1_43100 Lactuca sativa HOM05D005141 ORTHO05D006250 1.9e-70 270.8 406 47.3
CsaV3_3G046630 Cucumis sativus L. HOM05D005141 ORTHO05D006250 3.2e-70 270.0 334 49.4
MELO3C003675.2 Cucumis melo HOM05D005141 ORTHO05D006250 4.2e-70 269.6 419 43.4
Phvul.001G055100 Phaseolus vulgaris HOM05D005141 ORTHO05D006250 7.3e-67 258.8 360 46.4
EL10Ac2g02550 Beta vulgaris HOM05D005141 ORTHO05D006250 4.0e-65 253.1 359 46.8
CsaV3_2G031660 Cucumis sativus L. HOM05D005141 ORTHO05D006250 2.0e-64 250.8 268 55.6
Lsat_1_v5_gn_6_22941 Lactuca sativa HOM05D005141 ORTHO05D006250 1.1e-62 245.0 354 46.9
HanXRQChr13g0402161 Helianthus annuus HOM05D005141 ORTHO05D006250 3.2e-62 243.4 331 47.4
AUR62024850 Chenopodium quinoa HOM05D005141 ORTHO05D006250 2.7e-61 240.4 324 46.9
ATR0083G007 Amborella trichopoda HOM05D005141 ORTHO05D006250 2.3e-60 237.3 410 40.0
THA.LOC104803820 Tarenaya hassleriana HOM05D005141 ORTHO05D006250 1.6e-53 214.5 427 39.6
SGA_v2.0_scaffold27G11478 Striga asiatica HOM05D005141 ORTHO05D006250 4.3e-51 206.5 415 41.0
Thhalv10025562m.g Eutrema salsugineum HOM05D005141 ORTHO05D006250 2.2e-47 194.1 440 37.7
Sp7g30350 Schrenkiella parvula HOM05D005141 ORTHO05D006250 3.8e-47 193.4 439 36.4
BraA08t33764Z Brassica rapa HOM05D005141 ORTHO05D006250 1.2e-45 188.3 424 37.0
A08p18120 Brassica napus HOM05D005141 ORTHO05D006250 1.6e-45 188.0 421 38.0
Aqoxy7G01897 Aquilegia oxysepala HOM05D005141 ORTHO05D006250 2.7e-45 187.2 308 42.9
AL7G19190 Arabidopsis lyrata HOM05D005141 ORTHO05D006250 6.1e-45 186.0 403 37.7
BcaC01g01013 Brassica carinata HOM05D005141 ORTHO05D006250 1.0e-44 185.3 414 37.4
C03p87260 Brassica napus HOM05D005141 ORTHO05D006250 2.3e-44 184.1 421 36.8
BolC3t21027H Brassica oleracea HOM05D005141 ORTHO05D006250 3.9e-44 183.3 421 36.8
AT4G32570 Arabidopsis thaliana HOM05D005141 ORTHO05D006250 5.1e-44 183.0 430 36.0
Carub.0007s0798 Capsella rubella HOM05D005141 ORTHO05D006250 6.7e-44 182.6 437 36.2
BcaB03g12752 Brassica carinata HOM05D005141 ORTHO05D006250 4.3e-43 179.9 425 37.2
SHI18604 Sapria himalayana HOM05D005141 ORTHO05D006250 9.0e-41 172.2 294 38.4
A01p05810 Brassica napus HOM05D005141 ORTHO05D006250 2.6e-40 170.6 421 35.6
BraA01t00550Z Brassica rapa HOM05D005141 ORTHO05D006250 2.6e-40 170.6 420 35.5
HPP92_009098 Vanilla planifolia HOM05D005141 ORTHO05D006250 2.5e-38 164.1 310 41.3
Glyma.17G205200 Glycine max HOM05D005141 ORTHO05D006250 7.2e-38 162.5 196 48.0
C01p06380 Brassica napus HOM05D005141 ORTHO05D006250 1.6e-37 161.4 423 36.2
Aa31LG4G11720 Aethionema arabicum HOM05D005141 ORTHO05D006250 2.1e-37 161.0 423 34.3
BcaC09g52048 Brassica carinata HOM05D005141 ORTHO05D006250 2.3e-36 157.5 421 34.9
BolC1t00634H Brassica oleracea HOM05D005141 ORTHO05D006250 1.1e-35 155.2 419 35.3
unitig_37.g12225 Utricularia gibba HOM05D005141 ORTHO05D006250 3.2e-30 137.1 307 34.9
CSS0000568 Camellia sinensis var. sinensis HOM05D005141 ORTHO05D006250 1.6e-29 134.8 124 58.9
SEGI_18535 Sequoiadendron giganteum HOM05D005141 ORTHO05D006250 1.4e-28 131.7 302 34.4
Ah.10g025860 Amaranthus hybridus HOM05D005141 ORTHO05D006250 7.0e-25 119.4 179 44.1
unitig_46.g18533 Utricularia gibba HOM05D005141 ORTHO05D006250 1.2e-24 118.6 188 44.1
AagrBONN_evm.TU.Sc2ySwM_117.408 Anthoceros agrestis HOM05D005141 ORTHO05D006250 1.3e-23 115.2 336 34.5
Aqoxy81s001 Aquilegia oxysepala HOM05D005141 ORTHO05D006250 6.1e-21 106.3 133 49.6
Cpa.g.sc91.24 Carica papaya HOM05D005141 ORTHO05D006250 1.3e-18 98.6 103 53.4
SMO143G0273 Selaginella moellendorffii HOM05D005141 ORTHO05D006250 8.2e-18 95.9 184 38.6
Mapoly0079s0053 Marchantia polymorpha HOM05D005141 ORTHO05D006250 4.1e-17 93.6 393 29.8
Pp3c22_12420 Physcomitrium patens HOM05D005141 ORTHO05D006250 9.1e-17 92.4 389 29.0
BcaC08g44885 Brassica carinata HOM05D005141 ORTHO05D006250 3.5e-16 90.5 175 36.0
C06p25010 Brassica napus HOM05D000698 ORTHO05D006250 7.7e-16 89.4 191 35.1
Pp3c19_8700 Physcomitrium patens HOM05D005141 ORTHO05D006250 1.7e-15 88.2 378 27.8
A06p26660 Brassica napus HOM05D005141 ORTHO05D006250 3.8e-15 87.0 176 35.8
Haze_10527 Corylus avellana HOM05D005141 ORTHO05D006250 1.6e-13 81.6 96 45.8
SEGI_09816 Sequoiadendron giganteum HOM05D005141 ORTHO05D006250 1.0e-07 62.4 159 32.1
C07p35200 Brassica napus HOM05D005141 ORTHO05D006250 1.3e-07 62.0 63 50.8
BolC7t44052H Brassica oleracea HOM05D005141 ORTHO05D006250 1.3e-07 62.0 63 50.8
BolC9t58511H Brassica oleracea HOM05D005141 ORTHO05D006250 2.9e-07 60.8 60 51.7


User provided reference genes

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