Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN27G2409 Fragaria x ananassa HOM05D006214 ORTHO05D007723 2.1e-86 322.4 168 100.0
FvH4_2g36290 Fragaria vesca HOM05D006214 ORTHO05D007723 1.3e-85 319.7 168 99.4
FAN20G2536 Fragaria x ananassa HOM05D006214 ORTHO05D007723 3.0e-85 318.5 168 98.8
FAN15G3028 Fragaria x ananassa HOM05D006214 ORTHO05D007723 2.5e-84 315.5 168 93.5
RcHm_v2.0_Chr6g0305591 Rosa chinensis HOM05D006214 ORTHO05D007723 7.4e-76 287.3 157 88.5
Prupe.1G454300 Prunus persica HOM05D006214 ORTHO05D007723 9.6e-68 260.4 156 80.1
MD15G1099500 Malus domestica HOM05D006214 ORTHO05D007723 8.2e-67 257.3 152 86.8
PSO782G3114 Papaver somniferum HOM05D006214 ORTHO05D007723 8.2e-67 257.3 152 80.9
QL12p026136 Quercus lobata HOM05D006214 ORTHO05D007723 8.2e-67 257.3 167 76.0
COL.COLO4_18710 Corchorus olitorius HOM05D006214 ORTHO05D007723 1.1e-66 256.9 151 80.8
Potri.006G244300 Populus trichocarpa HOM05D006214 ORTHO05D007723 1.1e-66 256.9 158 78.5
Thecc.09G038200 Theobroma cacao HOM05D006214 ORTHO05D007723 1.1e-66 256.9 151 80.8
PSO063G0005 Papaver somniferum HOM05D006214 ORTHO05D007723 4.1e-66 255.0 152 80.3
Lsat_1_v5_gn_6_11341 Lactuca sativa HOM05D006214 ORTHO05D007723 5.3e-66 254.6 151 79.5
Psat6g005800 Pisum sativum HOM05D006214 ORTHO05D007723 1.2e-65 253.4 156 82.1
CANSAT25G2048 Cannabis sativa HOM05D006214 ORTHO05D007723 1.5e-65 253.1 156 78.2
CiPaw.07G208400 Carya illinoinensis HOM05D006214 ORTHO05D007723 2.0e-65 252.7 151 80.8
Haze_21823 Corylus avellana HOM05D006214 ORTHO05D007723 2.0e-65 252.7 156 82.1
DCAR_001036 Daucus carota HOM05D006214 ORTHO05D007723 2.0e-65 252.7 154 79.2
VMungo0647G2273 Vigna mungo HOM05D006214 ORTHO05D007723 2.0e-65 252.7 156 82.7
CiPaw.08G022500 Carya illinoinensis HOM05D006214 ORTHO05D007723 2.6e-65 252.3 166 74.7
TPR.G12079 Trifolium pratense HOM05D006214 ORTHO05D007723 2.6e-65 252.3 151 84.1
Nitab4.5_0002393g0090 Nicotiana tabacum HOM05D006214 ORTHO05D007723 3.4e-65 251.9 151 79.5
PGR044G2495 Punica granatum HOM05D006214 ORTHO05D007723 4.5e-65 251.5 156 76.9
Ca_12821_v3 Cicer arietinum L. HOM05D006214 ORTHO05D007723 7.6e-65 250.8 156 80.8
Ca_12822_v3 Cicer arietinum L. HOM05D006214 ORTHO05D007723 7.6e-65 250.8 156 80.8
Ciclev10009715m.g Citrus clementina HOM05D006214 ORTHO05D007723 1.0e-64 250.4 165 73.3
arahy.Tifrunner.gnm1.ann1.72Y1Y4 Arachis hypogaea HOM05D006214 ORTHO05D007723 1.3e-64 250.0 156 81.4
A01p05650 Brassica napus HOM05D003889 ORTHO05D004407 1.7e-64 249.6 166 72.3
Duzib150G0825 Durio zibethinus HOM05D006214 ORTHO05D007723 1.7e-64 249.6 152 78.9
THA.LOC104803814 Tarenaya hassleriana HOM05D006214 ORTHO05D007723 1.7e-64 249.6 157 76.4
Manes.03G064300 Manihot esculenta HOM05D006214 ORTHO05D007723 2.2e-64 249.2 156 76.9
Solyc08g068070.3 Solanum lycopersicum HOM05D006214 ORTHO05D007723 2.9e-64 248.8 151 78.1
Cpa.g.sc205.8 Carica papaya HOM05D006214 ORTHO05D007723 3.8e-64 248.4 156 75.6
Eucgr.C02883 Eucalyptus grandis HOM05D006214 ORTHO05D007723 3.8e-64 248.4 156 75.6
Nitab4.5_0000250g0190 Nicotiana tabacum HOM05D006214 ORTHO05D007723 3.8e-64 248.4 151 78.1
Sp7g30450 Schrenkiella parvula HOM05D006214 ORTHO05D007723 3.8e-64 248.4 165 74.5
Dinv30243 Davidia involucrata HOM05D006214 ORTHO05D007723 5.0e-64 248.1 151 76.8
TWI34G1412 Tripterygium wilfordii HOM05D006214 ORTHO05D007723 5.0e-64 248.1 151 77.5
Cfa013332 Carpinus fangiana HOM05D006214 ORTHO05D007723 6.5e-64 247.7 156 80.8
HanXRQChr07g0192221 Helianthus annuus HOM05D006214 ORTHO05D007723 6.5e-64 247.7 151 76.8
Sopen08g021960 Solanum pennellii HOM05D006214 ORTHO05D007723 6.5e-64 247.7 151 77.5
Oeu011261.1 Olea europaea HOM05D006214 ORTHO05D007723 8.4e-64 247.3 151 76.2
GSVIVG01035713001 Vitis vinifera HOM05D006214 ORTHO05D007723 8.4e-64 247.3 151 78.1
Actinidia13304 Actinidia chinensis HOM05D006214 ORTHO05D007723 1.1e-63 246.9 152 76.3
Aa31LG2G16930 Aethionema arabicum HOM05D006214 ORTHO05D007723 1.1e-63 246.9 160 73.8
Thhalv10026389m.g Eutrema salsugineum HOM05D006214 ORTHO05D007723 1.1e-63 246.9 160 74.4
Actinidia31216 Actinidia chinensis HOM05D006214 ORTHO05D007723 1.4e-63 246.5 152 76.3
Lj1g0018426 Lotus japonicus HOM05D006214 ORTHO05D007723 1.4e-63 246.5 156 80.8
Aqoxy7G01701 Aquilegia oxysepala HOM05D006214 ORTHO05D007723 1.9e-63 246.1 160 76.2
Phvul.001G060001 Phaseolus vulgaris HOM05D006214 ORTHO05D007723 1.9e-63 246.1 156 80.1
BraA01t00535Z Brassica rapa HOM05D003889 ORTHO05D004407 2.5e-63 245.7 167 71.3
Peaxi162Scf00105g00059 Petunia axillaris HOM05D006214 ORTHO05D007723 3.2e-63 245.4 151 82.1
PGSC0003DMG400014492 Solanum tuberosum HOM05D006214 ORTHO05D007723 3.2e-63 245.4 151 77.5
C01p06220 Brassica napus HOM05D003889 ORTHO05D004407 4.2e-63 245.0 158 75.3
Medtr1g008700 Medicago truncatula HOM05D006214 ORTHO05D007723 4.2e-63 245.0 157 75.8
Lalb_Chr22g0361001 Lupinus albus HOM05D006214 ORTHO05D007723 5.5e-63 244.6 151 76.8
TAR624G0931 Trochodendron aralioides HOM05D006214 ORTHO05D007723 5.5e-63 244.6 151 82.8
Oeu014655.1 Olea europaea HOM05D006214 ORTHO05D007723 7.2e-63 244.2 151 77.5
BolC1t00620H Brassica oleracea HOM05D006214 ORTHO05D007723 9.3e-63 243.8 161 73.9
Duzib168G0494 Durio zibethinus HOM05D006214 ORTHO05D007723 9.3e-63 243.8 156 79.5
arahy.Tifrunner.gnm1.ann1.8TR5WT Arachis hypogaea HOM05D006214 ORTHO05D007723 1.2e-62 243.4 156 78.8
CSS0015630 Camellia sinensis var. sinensis HOM05D006214 ORTHO05D007723 1.2e-62 243.4 151 76.8
CSS0049547 Camellia sinensis var. sinensis HOM05D006214 ORTHO05D007723 1.2e-62 243.4 151 76.8
Cc08_g08530 Coffea canephora HOM05D006214 ORTHO05D007723 1.2e-62 243.4 151 76.8
AUR62032401 Chenopodium quinoa HOM05D006214 ORTHO05D007723 1.6e-62 243.0 151 76.2
Gohir.D13G192400 Gossypium hirsutum HOM05D006214 ORTHO05D007723 1.6e-62 243.0 152 77.0
Gorai.013G218300 Gossypium raimondii HOM05D006214 ORTHO05D007723 1.6e-62 243.0 152 77.0
AL7G19050 Arabidopsis lyrata HOM05D006214 ORTHO05D007723 3.5e-62 241.9 151 78.1
CsaV3_2G031100 Cucumis sativus L. HOM05D006214 ORTHO05D007723 4.6e-62 241.5 165 71.5
Glyma.14G140400 Glycine max HOM05D006214 ORTHO05D007723 4.6e-62 241.5 151 80.8
MELO3C011160.2 Cucumis melo HOM05D006214 ORTHO05D007723 6.1e-62 241.1 165 71.5
Hund25645 Selenicereus undatus HOM05D006214 ORTHO05D007723 6.1e-62 241.1 156 75.0
Migut.A00249 Erythranthe guttata HOM05D006214 ORTHO05D007723 7.9e-62 240.7 151 75.5
Manes.16G067000 Manihot esculenta HOM05D006214 ORTHO05D007723 7.9e-62 240.7 156 75.0
Nn8g39214 Nelumbo nucifera HOM05D006214 ORTHO05D007723 7.9e-62 240.7 151 75.5
Hma1.2p1_0003F.1_g003500 Hydrangea macrophylla HOM05D006214 ORTHO05D007723 1.3e-61 240.0 151 74.2
Sc06g0000690 Simmondsia chinensis HOM05D006214 ORTHO05D007723 1.3e-61 240.0 165 70.3
BcaC09g52063 Brassica carinata HOM05D003889 ORTHO05D004407 8.7e-61 237.3 158 73.4
Sed0020806 Sechium edule HOM05D006214 ORTHO05D007723 8.7e-61 237.3 156 73.1
Rhsim02G0184100 Rhododendron simsii HOM05D006214 ORTHO05D007723 1.5e-60 236.5 147 76.2
CARHR240670 Cardamine hirsuta HOM05D006214 ORTHO05D007723 1.9e-60 236.1 151 74.8
SGA_v2.0_scaffold27G11530 Striga asiatica HOM05D006214 ORTHO05D007723 2.5e-60 235.7 159 73.6
ATR1120G189 Amborella trichopoda HOM05D006214 ORTHO05D007723 3.3e-60 235.3 151 74.8
AT4G32690 Arabidopsis thaliana HOM05D006214 ORTHO05D007723 3.3e-60 235.3 151 75.5
Solyc08g068090.3 Solanum lycopersicum HOM05D006214 ORTHO05D007723 3.3e-60 235.3 158 71.5
Carub.0007s0784 Capsella rubella HOM05D006214 ORTHO05D007723 7.4e-60 234.2 151 74.2
Sopen08g021970 Solanum pennellii HOM05D006214 ORTHO05D007723 3.7e-59 231.9 158 71.5
Psat0s1478g0160 Pisum sativum HOM05D006214 ORTHO05D007723 1.4e-58 229.9 151 73.5
Lj1g0018927 Lotus japonicus HOM05D006214 ORTHO05D007723 4.1e-58 228.4 156 70.5
Lalb_Chr08g0243361 Lupinus albus HOM05D006214 ORTHO05D007723 4.1e-58 228.4 153 72.5
Medtr3g109420 Medicago truncatula HOM05D006214 ORTHO05D007723 4.5e-57 224.9 151 72.8
SEGI_02532 Sequoiadendron giganteum HOM05D006214 ORTHO05D007723 4.5e-57 224.9 165 66.7
VMungo1309G2769 Vigna mungo HOM05D006214 ORTHO05D007723 4.5e-57 224.9 154 70.1
Ah.12g061040 Amaranthus hybridus HOM05D006214 ORTHO05D007723 5.9e-57 224.6 166 68.7
Zm00001eb386050 Zea mays HOM05D006214 ORTHO05D007723 5.9e-57 224.6 158 69.6
Atru.chr7.2182 Acer truncatum HOM05D006214 ORTHO05D007723 7.7e-57 224.2 139 75.5
Atru.chr7.2299 Acer truncatum HOM05D006214 ORTHO05D007723 7.7e-57 224.2 139 75.5
Lj8A606G25 Lonicera japonica HOM05D006214 ORTHO05D007723 7.7e-57 224.2 184 63.0
Glyma.04G079200 Glycine max HOM05D006214 ORTHO05D007723 1.7e-56 223.0 151 71.5
Phvul.009G104900 Phaseolus vulgaris HOM05D006214 ORTHO05D007723 3.8e-56 221.9 151 69.5
Ca_15627_v3 Cicer arietinum L. HOM05D006214 ORTHO05D007723 1.4e-55 219.9 145 72.4
TPR.G1342 Trifolium pratense HOM05D006214 ORTHO05D007723 2.1e-54 216.1 153 69.9
Os06g0591600 Oryza sativa ssp. japonica HOM05D006214 ORTHO05D007723 3.6e-54 215.3 157 66.9
Eucgr.L03669 Eucalyptus grandis HOM05D006214 ORTHO05D007723 1.8e-53 213.0 156 67.9
HPP92_005176 Vanilla planifolia HOM05D006214 ORTHO05D007723 1.1e-50 203.8 183 56.3
unitig_0.g2807 Utricularia gibba HOM05D006435 ORTHO05D008262 5.3e-50 201.4 141 73.0
SMO164G0258 Selaginella moellendorffii HOM05D006214 ORTHO05D007723 9.1e-50 200.7 150 63.3
Pp3c1_3380 Physcomitrium patens HOM05D006214 ORTHO05D007723 2.6e-49 199.1 148 65.5
CAN.G886.7 Capsicum annuum HOM05D006214 ORTHO05D007723 5.9e-49 198.0 134 72.4
Pp3c6_250 Physcomitrium patens HOM05D006214 ORTHO05D007723 2.2e-48 196.1 154 61.0
arahy.Tifrunner.gnm1.ann1.LJ0T63 Arachis hypogaea HOM05D006214 ORTHO05D007723 3.8e-48 195.3 142 68.3
Sabra06G0191200 Salix brachista HOM05D006214 ORTHO05D007723 1.4e-47 193.4 159 66.0
Gohir.D05G051050 Gossypium hirsutum HOM05D006214 ORTHO05D007723 1.9e-47 193.0 173 58.4
ECA233G3302 Erigeron canadensis HOM05D006214 ORTHO05D007723 5.5e-47 191.4 298 40.6
AagrBONN_evm.TU.Sc2ySwM_368.1910 Anthoceros agrestis HOM05D006214 ORTHO05D007723 6.1e-46 188.0 158 61.4
AUR62024819 Chenopodium quinoa HOM05D006214 ORTHO05D007723 6.3e-43 177.9 106 77.4
Gorai.009G052700 Gossypium raimondii HOM05D006214 ORTHO05D007723 5.0e-40 168.3 106 73.6
EL10Ac2g02522 Beta vulgaris HOM05D006214 ORTHO05D007723 5.7e-36 154.8 156 55.8
MBI04_g08934_MAGBIO Magnolia biondii HOM05D006214 ORTHO05D003073 3.5e-33 145.6 87 80.5
TAR636G1550 Trochodendron aralioides HOM05D006214 ORTHO05D007723 2.1e-30 136.3 81 79.0
ClCG08G012410 Citrullus lanatus HOM05D006214 ORTHO05D007723 1.0e-29 134.0 206 41.7
CSS0020447 Camellia sinensis var. sinensis HOM05D006214 ORTHO05D007723 4.8e-27 125.2 84 75.0
Lsat_1_v5_gn_6_11301 Lactuca sativa HOM05D006214 ORTHO05D007723 2.0e-20 103.2 67 73.1
CSS0007395 Camellia sinensis var. sinensis HOM05D006214 ORTHO05D007723 5.4e-18 95.1 60 66.7
Potri.018G036200 Populus trichocarpa HOM05D006214 ORTHO05D007723 2.0e-17 93.2 64 65.6
C01p47490 Brassica napus HOM05D006214 ORTHO05D007723 5.0e-16 88.6 80 52.5
HanXRQChr07g0195131 Helianthus annuus HOM05D006214 ORTHO05D007723 1.1e-10 70.9 45 75.6
BolC1t04720H Brassica oleracea HOM05D006214 ORTHO05D007723 5.4e-10 68.6 45 64.4
Peaxi162Scf00105g00513 Petunia axillaris HOM05D006214 ORTHO05D007723 7.0e-10 68.2 82 43.9
Glyma.06G080700 Glycine max HOM05D006214 ORTHO05D007723 1.2e-09 67.4 50 58.0
arahy.Tifrunner.gnm1.ann1.YGZX15 Arachis hypogaea HOM05D000254 ORTHO05D000165 7.8e-09 64.7 39 71.8
Nitab4.5_0000250g0200 Nicotiana tabacum HOM05D006214 ORTHO05D007723 2.8e-06 56.2 38 65.8


User provided reference genes

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