Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN27G2298 Fragaria x ananassa HOM05D005449 ORTHO05D006916 2.7e-71 271.9 143 100.0
FAN20G1025 Fragaria x ananassa HOM05D005449 ORTHO05D006916 5.9e-66 254.2 136 97.1
FvH4_2g03920 Fragaria vesca HOM05D005449 ORTHO05D006916 3.8e-65 251.5 136 95.6
FAN15G2928 Fragaria x ananassa HOM05D005449 ORTHO05D006916 5.0e-65 251.1 136 95.6
RcHm_v2.0_Chr6g0252971 Rosa chinensis HOM05D005449 ORTHO05D006916 2.3e-62 242.3 136 91.2
RcHm_v2.0_Chr6g0252941 Rosa chinensis HOM05D005449 ORTHO05D006916 2.0e-61 239.2 136 90.4
Cfa005902 Carpinus fangiana HOM05D005449 ORTHO05D006916 1.5e-53 213.0 142 79.6
Sed0024679 Sechium edule HOM05D005449 ORTHO05D006916 4.4e-53 211.5 142 79.6
Prupe.8G140700 Prunus persica HOM05D005449 ORTHO05D006916 5.7e-53 211.1 143 76.9
QL12p028306 Quercus lobata HOM05D005449 ORTHO05D006916 9.7e-53 210.3 141 78.0
MD05G1096300 Malus domestica HOM05D005449 ORTHO05D006916 2.8e-52 208.8 142 78.2
CSS0004919 Camellia sinensis var. sinensis HOM05D005449 ORTHO05D006916 6.3e-52 207.6 142 76.1
MELO3C017987.2 Cucumis melo HOM05D005449 ORTHO05D006916 2.4e-51 205.7 142 76.8
CsaV3_4G000480 Cucumis sativus L. HOM05D005449 ORTHO05D006916 2.4e-51 205.7 142 76.1
Dinv44016 Davidia involucrata HOM05D005449 ORTHO05D006916 5.3e-51 204.5 139 77.0
Hma1.2p1_1986F.1_g310070 Hydrangea macrophylla HOM05D005449 ORTHO05D006916 9.1e-51 203.8 142 76.8
Hma1.2p1_2044F.1_g312372 Hydrangea macrophylla HOM05D005449 ORTHO05D006916 9.1e-51 203.8 142 76.8
TWI14G0435 Tripterygium wilfordii HOM05D005449 ORTHO05D006916 9.1e-51 203.8 138 77.5
Dinv33060 Davidia involucrata HOM05D005449 ORTHO05D006916 1.6e-50 203.0 142 74.6
TAR636G0282 Trochodendron aralioides HOM05D005449 ORTHO05D006916 2.7e-50 202.2 143 74.8
Rhsim06G0059700 Rhododendron simsii HOM05D005449 ORTHO05D006916 3.5e-50 201.8 135 74.8
CiPaw.08G094600 Carya illinoinensis HOM05D005449 ORTHO05D006916 1.0e-49 200.3 142 74.6
Nn3g21512 Nelumbo nucifera HOM05D005449 ORTHO05D006916 1.0e-49 200.3 138 74.6
FAN22G2041 Fragaria x ananassa HOM05D005449 ORTHO05D006916 5.0e-49 198.0 123 79.7
RcHm_v2.0_Chr4g0408421 Rosa chinensis HOM05D005449 ORTHO05D006916 6.5e-49 197.6 125 78.4
DCAR_002842 Daucus carota HOM05D005449 ORTHO05D006916 8.5e-49 197.2 141 73.8
FvH4_4g11510 Fragaria vesca HOM05D005449 ORTHO05D006916 8.5e-49 197.2 123 78.9
PGSC0003DMG400018921 Solanum tuberosum HOM05D005449 ORTHO05D006916 8.5e-49 197.2 141 75.2
Sopen08g023260 Solanum pennellii HOM05D005449 ORTHO05D006916 1.5e-48 196.4 141 75.2
Solyc08g074670.3 Solanum lycopersicum HOM05D005449 ORTHO05D006916 2.5e-48 195.7 141 74.5
Eucgr.F02473 Eucalyptus grandis HOM05D005449 ORTHO05D006916 3.2e-48 195.3 142 73.2
Duzib138G1099 Durio zibethinus HOM05D005449 ORTHO05D006916 5.5e-48 194.5 139 73.4
ClCG10G010560 Citrullus lanatus HOM05D005449 ORTHO05D006916 7.2e-48 194.1 159 67.3
Migut.D00146 Erythranthe guttata HOM05D005449 ORTHO05D006916 7.2e-48 194.1 139 73.4
FAN07G2516 Fragaria x ananassa HOM05D005449 ORTHO05D006916 7.2e-48 194.1 123 78.0
CANSAT25G1565 Cannabis sativa HOM05D005449 ORTHO05D006916 9.4e-48 193.7 142 72.5
Cpa.g.sc9.253 Carica papaya HOM05D005449 ORTHO05D006916 9.4e-48 193.7 130 76.9
Ca_17681_v3 Cicer arietinum L. HOM05D005449 ORTHO05D006916 9.4e-48 193.7 137 74.5
Ca_29605_v3 Cicer arietinum L. HOM05D005449 ORTHO05D006916 9.4e-48 193.7 137 74.5
CiPaw.07G110200 Carya illinoinensis HOM05D005449 ORTHO05D006916 1.6e-47 193.0 142 73.9
CAN.G857.16 Capsicum annuum HOM05D005449 ORTHO05D006916 2.1e-47 192.6 141 73.0
Potri.014G127900 Populus trichocarpa HOM05D005449 ORTHO05D006916 2.1e-47 192.6 143 69.9
PSO675G2222 Papaver somniferum HOM05D005449 ORTHO05D006916 2.7e-47 192.2 141 71.6
Lsat_1_v5_gn_8_164201 Lactuca sativa HOM05D005449 ORTHO05D006916 4.7e-47 191.4 140 72.1
vmacro09952 Vaccinium macrocarpon HOM05D005449 ORTHO05D006916 4.7e-47 191.4 166 63.9
COL.COLO4_23333 Corchorus olitorius HOM05D005449 ORTHO05D006916 6.1e-47 191.0 139 74.1
Oeu054120.1 Olea europaea HOM05D005449 ORTHO05D006916 6.1e-47 191.0 140 72.1
Thecc.01G301700 Theobroma cacao HOM05D005449 ORTHO05D006916 6.1e-47 191.0 139 71.9
MSTRG.21637 Avicennia marina HOM05D005449 ORTHO05D006916 8.0e-47 190.7 142 71.8
Glyma.05G185600 Glycine max HOM05D005449 ORTHO05D006916 8.0e-47 190.7 135 73.3
Ah.08g213380 Amaranthus hybridus HOM05D005449 ORTHO05D006916 1.0e-46 190.3 131 75.6
TWI59G1340 Tripterygium wilfordii HOM05D005449 ORTHO05D006916 1.0e-46 190.3 142 71.8
HanXRQChr06g0163691 Helianthus annuus HOM05D005449 ORTHO05D006916 1.8e-46 189.5 129 76.7
Sabra14G0095000 Salix brachista HOM05D005449 ORTHO05D006916 1.8e-46 189.5 116 81.0
Gohir.D12G133700 Gossypium hirsutum HOM05D005449 ORTHO05D006916 2.3e-46 189.1 140 71.4
Gorai.008G144700 Gossypium raimondii HOM05D005449 ORTHO05D006916 2.3e-46 189.1 140 71.4
Lj4g0006553 Lotus japonicus HOM05D005449 ORTHO05D006916 2.3e-46 189.1 137 73.0
EL10Ac7g17526 Beta vulgaris HOM05D005449 ORTHO05D006916 3.0e-46 188.7 122 78.7
MBI18_g24865_MAGBIO Magnolia biondii HOM05D005449 ORTHO05D006916 3.0e-46 188.7 137 74.5
Manes.05G061600 Manihot esculenta HOM05D005449 ORTHO05D006916 3.0e-46 188.7 142 68.3
Cc01_g20940 Coffea canephora HOM05D005449 ORTHO05D006916 4.0e-46 188.3 141 71.6
Medtr8g092180 Medicago truncatula HOM05D005449 ORTHO05D006916 4.0e-46 188.3 139 71.2
PGR119G1363 Punica granatum HOM05D005449 ORTHO05D006916 4.0e-46 188.3 135 73.3
Peaxi162Scf00445g00079 Petunia axillaris HOM05D005449 ORTHO05D006916 5.2e-46 188.0 141 72.3
Phvul.002G266700 Phaseolus vulgaris HOM05D005449 ORTHO05D006916 6.8e-46 187.6 135 73.3
Hund11156 Selenicereus undatus HOM05D005449 ORTHO05D006916 8.8e-46 187.2 125 77.6
ECA236G0849 Erigeron canadensis HOM05D005449 ORTHO05D006916 1.2e-45 186.8 136 73.5
Gohir.A12G129900 Gossypium hirsutum HOM05D005449 ORTHO05D006916 1.2e-45 186.8 140 70.7
Nitab4.5_0008438g0020 Nicotiana tabacum HOM05D005449 ORTHO05D006916 1.2e-45 186.8 141 71.6
SGA_v2.0_scaffold1G00359 Striga asiatica HOM05D005449 ORTHO05D006916 1.2e-45 186.8 141 71.6
Duzib211G0575 Durio zibethinus HOM05D005449 ORTHO05D006916 2.6e-45 185.7 139 71.2
Oeu024404.1 Olea europaea HOM05D005449 ORTHO05D006916 2.6e-45 185.7 140 70.7
Aqoxy1G00207 Aquilegia oxysepala HOM05D005449 ORTHO05D006916 1.7e-44 183.0 141 67.4
Nitab4.5_0002276g0010 Nicotiana tabacum HOM05D005449 ORTHO05D006916 1.7e-44 183.0 138 71.7
Rhsim09G0186400 Rhododendron simsii HOM05D005449 ORTHO05D006916 2.8e-44 182.2 162 61.7
Actinidia21206 Actinidia chinensis HOM05D005449 ORTHO05D006916 3.7e-44 181.8 135 69.6
CDE05G2918 Ceratophyllum demersum HOM05D005449 ORTHO05D006916 3.7e-44 181.8 138 66.7
Peaxi162Scf00045g01343 Petunia axillaris HOM05D005449 ORTHO05D006916 8.3e-44 180.6 141 68.8
GSVIVG01028030001 Vitis vinifera HOM05D005449 ORTHO05D006916 1.1e-43 180.3 111 81.1
Ciclev10022754m.g Citrus clementina HOM05D005449 ORTHO05D006916 1.8e-43 179.5 133 71.4
TPR.G2165 Trifolium pratense HOM05D005449 ORTHO05D006916 2.4e-43 179.1 139 69.8
THA.LOC104817488 Tarenaya hassleriana HOM05D005449 ORTHO05D006916 3.1e-43 178.7 118 76.3
Solyc08g005920.3 Solanum lycopersicum HOM05D005449 ORTHO05D006916 7.0e-43 177.6 134 69.4
Glyma.08G143600 Glycine max HOM05D005449 ORTHO05D006916 1.2e-42 176.8 135 69.6
Psat7g049640 Pisum sativum HOM05D005449 ORTHO05D006916 2.0e-42 176.0 119 75.6
PGSC0003DMG400004469 Solanum tuberosum HOM05D005449 ORTHO05D006916 2.0e-42 176.0 141 70.2
ATR0582G023 Amborella trichopoda HOM05D005449 ORTHO05D006916 4.5e-42 174.9 137 65.7
Sopen08g001890 Solanum pennellii HOM05D005449 ORTHO05D006916 4.5e-42 174.9 141 68.8
Lalb_Chr03g0036381 Lupinus albus HOM05D005449 ORTHO05D006916 5.9e-42 174.5 118 74.6
arahy.Tifrunner.gnm1.ann1.X8E93Z Arachis hypogaea HOM05D005449 ORTHO05D006916 1.0e-41 173.7 141 65.2
arahy.Tifrunner.gnm1.ann1.YB8ZH2 Arachis hypogaea HOM05D005449 ORTHO05D006916 1.0e-41 173.7 141 65.2
RcHm_v2.0_Chr6g0264541 Rosa chinensis HOM05D005449 ORTHO05D006916 1.0e-41 173.7 99 88.9
unitig_26.g10174 Utricularia gibba HOM05D005449 ORTHO05D006916 1.5e-40 169.9 142 63.4
Nitab4.5_0000860g0030 Nicotiana tabacum HOM05D005449 ORTHO05D006916 1.9e-40 169.5 141 67.4
Os05g0154900 Oryza sativa ssp. japonica HOM05D005449 ORTHO05D006916 1.9e-40 169.5 130 66.9
VMungo0251G2862 Vigna mungo HOM05D000587 ORTHO05D000929 9.5e-40 167.2 135 67.4
Sc04g0009560 Simmondsia chinensis HOM05D005449 ORTHO05D006916 3.6e-39 165.2 145 62.1
AL5G33630 Arabidopsis lyrata HOM05D005449 ORTHO05D006916 1.0e-38 163.7 119 71.4
AUR62008679 Chenopodium quinoa HOM05D005449 ORTHO05D006916 2.0e-37 159.5 131 67.9
Zm00001eb346090 Zea mays HOM05D005449 ORTHO05D006916 1.7e-36 156.4 118 69.5
Lsat_1_v5_gn_7_53001 Lactuca sativa HOM05D005449 ORTHO05D006916 4.5e-34 148.3 143 62.9
HPP92_010681 Vanilla planifolia HOM05D005449 ORTHO05D006916 3.8e-33 145.2 127 61.4
AUR62025565 Chenopodium quinoa HOM05D005449 ORTHO05D006916 1.5e-32 143.3 131 62.6
FvH4_7g29690 Fragaria vesca HOM05D005449 ORTHO05D006916 1.6e-31 139.8 78 89.7
BcaB01g00336 Brassica carinata HOM05D005449 ORTHO05D006916 1.0e-30 137.1 119 63.9
MD10G1102600 Malus domestica HOM05D005449 ORTHO05D006916 1.0e-30 137.1 85 78.8
Atru.chr5.1135 Acer truncatum HOM05D005449 ORTHO05D006916 1.8e-30 136.3 90 77.8
A09p45940 Brassica napus HOM05D005449 ORTHO05D006916 1.8e-30 136.3 119 63.9
BolC8t50425H Brassica oleracea HOM05D005449 ORTHO05D006916 1.8e-30 136.3 119 63.9
CARHR162730 Cardamine hirsuta HOM05D005449 ORTHO05D006916 1.8e-30 136.3 138 59.4
AT3G52860 Arabidopsis thaliana HOM05D005449 ORTHO05D006916 2.3e-30 136.0 87 79.3
Carub.0005s1933 Capsella rubella HOM05D005449 ORTHO05D006916 2.3e-30 136.0 138 58.0
C08p28130 Brassica napus HOM05D005449 ORTHO05D006916 3.0e-30 135.6 119 63.0
BraA09t40054Z Brassica rapa HOM05D005449 ORTHO05D006916 3.0e-30 135.6 119 63.0
Sp5g09480 Schrenkiella parvula HOM05D005449 ORTHO05D006916 3.0e-30 135.6 84 82.1
Thhalv10010784m.g Eutrema salsugineum HOM05D005449 ORTHO05D006916 8.9e-30 134.0 119 63.9
Pp3c14_5880 Physcomitrium patens HOM05D005449 ORTHO05D006916 8.9e-30 134.0 117 59.0
SMO367G0046 Selaginella moellendorffii HOM05D005449 ORTHO05D006916 3.4e-29 132.1 121 56.2
Haze_04950 Corylus avellana HOM05D005449 ORTHO05D006916 4.4e-29 131.7 83 78.3
SEGI_14448 Sequoiadendron giganteum HOM05D005449 ORTHO05D006916 1.3e-28 130.2 131 56.5
HanXRQChr06g0163731 Helianthus annuus HOM05D005449 ORTHO05D006916 2.9e-28 129.0 86 80.2
Ciclev10033890m.g Citrus clementina HOM05D005449 ORTHO05D006916 4.9e-28 128.3 173 48.0
HanXRQChr10g0316901 Helianthus annuus HOM05D005449 ORTHO05D006916 4.1e-27 125.2 95 71.6
PSO675G2923 Papaver somniferum HOM05D005449 ORTHO05D006916 3.0e-25 119.0 88 69.3
Atru.chr11.2437 Acer truncatum HOM05D005449 ORTHO05D006916 5.6e-24 114.8 167 43.7
AagrBONN_evm.TU.Sc2ySwM_117.989 Anthoceros agrestis HOM05D005449 ORTHO05D006916 1.4e-22 110.2 128 50.0
Actinidia07783 Actinidia chinensis HOM05D005449 ORTHO05D006916 4.4e-21 105.1 73 72.6
Mapoly0162s0020 Marchantia polymorpha HOM05D005449 ORTHO05D006916 2.2e-20 102.8 132 43.9
Zm00001eb085090 Zea mays HOM05D005449 ORTHO05D006916 1.1e-14 84.0 111 46.8
Zm00001eb340530 Zea mays HOM05D005449 ORTHO05D006916 8.9e-14 80.9 91 52.7
Manes.01G220201 Manihot esculenta HOM05D005449 ORTHO05D006916 5.8e-13 78.2 84 51.2
FAN17G0623 Fragaria x ananassa HOM05D005449 ORTHO05D006916 2.9e-12 75.9 40 90.0
BcaC07g39651 Brassica carinata HOM05D001272 ORTHO05D001843 1.1e-11 73.9 85 51.8
Hma1.2p1_0276F.1_g111190 Hydrangea macrophylla HOM05D005449 ORTHO05D006916 7.1e-11 71.2 67 53.7
Hma1.2p1_0494F.1_g165230 Hydrangea macrophylla HOM05D005449 ORTHO05D006916 9.5e-08 60.8 33 81.8
Aa31LG10G7880 Aethionema arabicum HOM05D005449 ORTHO05D006916 6.8e-06 54.7 74 47.3
C06p20730 Brassica napus HOM05D005449 ORTHO05D027985 8.9e-06 54.3 66 45.5
BolC6t37256H Brassica oleracea HOM05D005449 ORTHO05D027985 8.9e-06 54.3 66 45.5


User provided reference genes

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