Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN27G2220 Fragaria x ananassa HOM05D004750 ORTHO05D006207 1.8e-90 335.9 164 100.0
FAN15G0403 Fragaria x ananassa HOM05D004750 ORTHO05D006207 4.1e-87 324.7 160 98.8
FAN20G0807 Fragaria x ananassa HOM05D004750 ORTHO05D006207 9.1e-87 323.6 160 98.1
FvH4_2g21920 Fragaria vesca HOM05D004750 ORTHO05D006207 3.4e-86 321.6 160 97.5
FAN24G1514 Fragaria x ananassa HOM05D004750 ORTHO05D006207 3.4e-86 321.6 160 97.5
RcHm_v2.0_Chr6g0288821 Rosa chinensis HOM05D004750 ORTHO05D006207 3.9e-74 281.6 160 88.8
Prupe.8G227200 Prunus persica HOM05D004750 ORTHO05D006207 9.4e-60 233.8 170 70.0
MD10G1187200 Malus domestica HOM05D004750 ORTHO05D006207 2.0e-54 216.1 163 66.9
TWI18G0451 Tripterygium wilfordii HOM05D004750 ORTHO05D006207 1.7e-53 213.0 161 67.7
MD05G1200600 Malus domestica HOM05D004750 ORTHO05D006207 3.3e-52 208.8 160 68.1
Potri.005G222000 Populus trichocarpa HOM05D004750 ORTHO05D006207 4.9e-48 194.9 161 60.2
GSVIVG01028293001 Vitis vinifera HOM05D004750 ORTHO05D006207 3.1e-47 192.2 163 60.7
Thecc.01G261600 Theobroma cacao HOM05D004750 ORTHO05D006207 7.0e-47 191.0 162 59.9
TAR362G0996 Trochodendron aralioides HOM05D004750 ORTHO05D006207 7.0e-47 191.0 161 61.5
CANSAT01G0335 Cannabis sativa HOM05D004750 ORTHO05D006207 1.2e-46 190.3 155 62.6
Manes.12G030800 Manihot esculenta HOM05D004750 ORTHO05D006207 1.2e-46 190.3 159 61.6
Cpa.g.sc50.41 Carica papaya HOM05D004750 ORTHO05D006207 1.6e-46 189.9 159 58.5
Cfa002398 Carpinus fangiana HOM05D004750 ORTHO05D006207 1.6e-46 189.9 162 58.0
Actinidia09562 Actinidia chinensis HOM05D004750 ORTHO05D006207 1.0e-45 187.2 161 59.0
Sabra05G0170600 Salix brachista HOM05D004750 ORTHO05D006207 1.7e-45 186.4 161 59.0
Lj1A64T37 Lonicera japonica HOM05D004750 ORTHO05D006207 8.6e-45 184.1 161 59.0
CiPaw.03G261600 Carya illinoinensis HOM05D004750 ORTHO05D006207 1.1e-44 183.7 157 61.1
Duzib211G0524 Durio zibethinus HOM05D004750 ORTHO05D006207 1.1e-44 183.7 163 59.5
Hma1.2p1_0273F.1_g109920 Hydrangea macrophylla HOM05D004750 ORTHO05D006207 1.5e-44 183.3 161 61.5
Gohir.D08G207700 Gossypium hirsutum HOM05D004750 ORTHO05D006207 2.5e-44 182.6 161 60.2
Gorai.004G220100 Gossypium raimondii HOM05D004750 ORTHO05D006207 2.5e-44 182.6 161 60.2
COL.COLO4_05604 Corchorus olitorius HOM05D004750 ORTHO05D006207 4.3e-44 181.8 163 58.9
PGR031G0841 Punica granatum HOM05D004750 ORTHO05D006207 4.3e-44 181.8 159 61.0
Eucgr.B01530 Eucalyptus grandis HOM05D004750 ORTHO05D006207 5.6e-44 181.4 156 59.0
Duzib133G0290 Durio zibethinus HOM05D004750 ORTHO05D006207 7.3e-44 181.0 162 59.3
Atru.chr5.1643 Acer truncatum HOM05D004750 ORTHO05D006207 9.5e-44 180.6 162 58.0
Sc17g0000770 Simmondsia chinensis HOM05D004750 ORTHO05D006207 2.8e-43 179.1 161 58.4
Gohir.A08G189200 Gossypium hirsutum HOM05D004750 ORTHO05D006207 4.7e-43 178.3 161 57.8
Ciclev10019537m.g Citrus clementina HOM05D004750 ORTHO05D006207 1.0e-42 177.2 161 57.1
ClCG09G008060 Citrullus lanatus HOM05D004750 ORTHO05D006207 1.4e-42 176.8 154 58.4
Ca_09693_v3 Cicer arietinum L. HOM05D004750 ORTHO05D006207 4.0e-42 175.3 158 57.0
arahy.Tifrunner.gnm1.ann1.I9TYEM Arachis hypogaea HOM05D004750 ORTHO05D006207 5.2e-42 174.9 156 58.3
Lalb_Chr06g0162481 Lupinus albus HOM05D004750 ORTHO05D006207 5.2e-42 174.9 158 57.6
CsaV3_7G027010 Cucumis sativus L. HOM05D004750 ORTHO05D006207 8.9e-42 174.1 172 54.7
Nn3g19610 Nelumbo nucifera HOM05D004750 ORTHO05D006207 1.2e-41 173.7 161 56.5
arahy.Tifrunner.gnm1.ann1.58RJ2S Arachis hypogaea HOM05D004750 ORTHO05D006207 1.5e-41 173.3 156 57.7
DCAR_002681 Daucus carota HOM05D004750 ORTHO05D006207 1.5e-41 173.3 159 59.1
Phvul.007G194900 Phaseolus vulgaris HOM05D004750 ORTHO05D006207 1.5e-41 173.3 158 55.7
Glyma.13G121500 Glycine max HOM05D004750 ORTHO05D006207 2.6e-41 172.6 158 53.2
Peaxi162Scf01530g00029 Petunia axillaris HOM05D004750 ORTHO05D006207 3.4e-41 172.2 158 57.0
SalBow6G6555 Salvia bowleyana HOM05D004750 ORTHO05D006207 4.4e-41 171.8 158 56.3
BraA05t19288Z Brassica rapa HOM05D004750 ORTHO05D006207 9.8e-41 170.6 160 55.0
VMungo0720G0257 Vigna mungo HOM05D004750 ORTHO05D006207 9.8e-41 170.6 162 53.7
C04p03600 Brassica napus HOM05D004750 ORTHO05D006207 1.7e-40 169.9 160 55.0
BolC4t21995H Brassica oleracea HOM05D004750 ORTHO05D006207 1.7e-40 169.9 160 55.0
Rhsim01G0266000 Rhododendron simsii HOM05D004750 ORTHO05D006207 1.7e-40 169.9 164 55.5
SGA_v2.0_scaffold80G25776 Striga asiatica HOM05D004750 ORTHO05D006207 2.2e-40 169.5 157 57.3
A05p02980 Brassica napus HOM05D004750 ORTHO05D006207 4.9e-40 168.3 160 54.4
vmacro14850 Vaccinium macrocarpon HOM05D004750 ORTHO05D006207 4.9e-40 168.3 159 56.0
DCAR_012532 Daucus carota HOM05D004750 ORTHO05D006207 6.4e-40 167.9 152 58.6
Migut.N02195 Erythranthe guttata HOM05D004750 ORTHO05D006207 8.3e-40 167.5 160 53.1
Ah.11g049820 Amaranthus hybridus HOM05D004750 ORTHO05D006207 1.1e-39 167.2 164 55.5
Thhalv10016471m.g Eutrema salsugineum HOM05D004750 ORTHO05D006207 1.1e-39 167.2 160 53.1
Sp4g24590 Schrenkiella parvula HOM05D004750 ORTHO05D006207 1.1e-39 167.2 160 52.5
Lj5g0027127 Lotus japonicus HOM05D004750 ORTHO05D006207 1.8e-39 166.4 157 56.1
Medtr1g070195 Medicago truncatula HOM05D004750 ORTHO05D006207 3.2e-39 165.6 158 55.7
Psat0s484g0120 Pisum sativum HOM05D004750 ORTHO05D006207 4.1e-39 165.2 157 53.5
Cc01_g18500 Coffea canephora HOM05D004750 ORTHO05D006207 5.4e-39 164.9 158 53.2
Sed0006871 Sechium edule HOM05D004750 ORTHO05D006207 5.4e-39 164.9 153 56.9
Hund09589 Selenicereus undatus HOM05D004750 ORTHO05D006207 7.0e-39 164.5 166 53.6
THA.LOC104802241 Tarenaya hassleriana HOM05D004750 ORTHO05D006207 7.0e-39 164.5 160 54.4
TPR.G3576 Trifolium pratense HOM05D004750 ORTHO05D006207 7.0e-39 164.5 158 53.8
Carub.0004s2484 Capsella rubella HOM05D004750 ORTHO05D006207 1.2e-38 163.7 160 52.5
CSS0022255 Camellia sinensis var. sinensis HOM05D004750 ORTHO05D006207 2.7e-38 162.5 162 56.8
AL4G40900 Arabidopsis lyrata HOM05D004750 ORTHO05D006207 4.6e-38 161.8 160 50.6
AUR62011896 Chenopodium quinoa HOM05D004750 ORTHO05D006207 6.0e-38 161.4 166 56.6
Nitab4.5_0000086g0140 Nicotiana tabacum HOM05D004750 ORTHO05D006207 6.0e-38 161.4 158 55.7
PSO063G5405 Papaver somniferum HOM05D004750 ORTHO05D006207 6.0e-38 161.4 162 51.9
EL10Ac5g10422 Beta vulgaris HOM05D004750 ORTHO05D006207 7.8e-38 161.0 163 50.9
CARHR137490 Cardamine hirsuta HOM05D004750 ORTHO05D006207 7.8e-38 161.0 160 52.5
Aa31LG1G24270 Aethionema arabicum HOM05D004750 ORTHO05D006207 1.0e-37 160.6 160 52.5
Aqoxy2G03613 Aquilegia oxysepala HOM05D004750 ORTHO05D006207 1.3e-37 160.2 162 50.6
PSO017G3851 Papaver somniferum HOM05D004750 ORTHO05D006207 1.7e-37 159.8 162 51.2
AT2G42450 Arabidopsis thaliana HOM05D004750 ORTHO05D006207 3.0e-37 159.1 160 50.0
AUR62024737 Chenopodium quinoa HOM05D004750 ORTHO05D006207 3.0e-37 159.1 168 54.8
HanXRQChr01g0014351 Helianthus annuus HOM05D004750 ORTHO05D006207 3.9e-37 158.7 158 55.7
Nitab4.5_0004303g0040 Nicotiana tabacum HOM05D004750 ORTHO05D006207 5.0e-37 158.3 153 54.2
HanXRQChr09g0249261 Helianthus annuus HOM05D004750 ORTHO05D006207 8.6e-37 157.5 158 54.4
MBI18_g37354_MAGBIO Magnolia biondii HOM05D004750 ORTHO05D006207 1.1e-36 157.1 158 53.8
CDE05G0417 Ceratophyllum demersum HOM05D004750 ORTHO05D006207 1.9e-36 156.4 156 53.8
ECA248G1706 Erigeron canadensis HOM05D004750 ORTHO05D006207 1.9e-36 156.4 156 55.1
Solyc06g083920.4 Solanum lycopersicum HOM05D004750 ORTHO05D006207 4.3e-36 155.2 158 51.3
Peaxi162Scf00134g00912 Petunia axillaris HOM05D004750 ORTHO05D006207 1.2e-35 153.7 158 50.0
Sopen06g035320 Solanum pennellii HOM05D004750 ORTHO05D006207 1.2e-35 153.7 158 50.6
PGSC0003DMG400020145 Solanum tuberosum HOM05D004750 ORTHO05D006207 1.2e-35 153.7 158 51.9
CAN.G771.23 Capsicum annuum HOM05D004750 ORTHO05D006207 1.6e-35 153.3 158 51.3
Oeu026229.2 Olea europaea HOM05D004750 ORTHO05D006207 2.1e-35 152.9 162 50.6
Lsat_1_v5_gn_5_182081 Lactuca sativa HOM05D004750 ORTHO05D006207 4.7e-35 151.8 159 50.3
HPP92_007154 Vanilla planifolia HOM05D004750 ORTHO05D006207 8.0e-35 151.0 156 51.9
ATR0680G188 Amborella trichopoda HOM05D004750 ORTHO05D006207 1.1e-34 150.6 162 50.6
Os09g0571500 Oryza sativa ssp. japonica HOM05D004750 ORTHO05D006207 3.7e-32 142.1 152 50.7
unitig_37.g12601 Utricularia gibba HOM05D004750 ORTHO05D006207 1.1e-31 140.6 157 45.9
MELO3C012746.2 Cucumis melo HOM05D004750 ORTHO05D006207 3.2e-31 139.0 133 55.6
Zm00001eb095800 Zea mays HOM05D004750 ORTHO05D006207 1.0e-29 134.0 152 47.4
Haze_24596 Corylus avellana HOM05D004750 ORTHO05D006207 3.0e-29 132.5 121 53.7
QL10p040832 Quercus lobata HOM05D004750 ORTHO05D006207 3.4e-25 119.0 155 45.2
SEGI_24870 Sequoiadendron giganteum HOM05D001800 ORTHO05D000007 5.8e-25 118.2 168 44.6
AagrBONN_evm.TU.Sc2ySwM_344.2086 Anthoceros agrestis HOM05D004750 ORTHO05D006207 2.2e-16 89.7 158 36.7
SMO147G0111 Selaginella moellendorffii HOM05D004750 ORTHO05D006207 1.4e-15 87.0 153 35.9
BcaB04g17273 Brassica carinata HOM05D004750 ORTHO05D006207 9.2e-15 84.3 95 50.5
BcaB07g32727 Brassica carinata HOM05D004750 ORTHO05D006207 2.7e-14 82.8 95 49.5
Mapoly0007s0153 Marchantia polymorpha HOM05D004750 ORTHO05D006207 3.5e-14 82.4 151 35.1
Pp3c22_2890 Physcomitrium patens HOM05D004750 ORTHO05D006207 4.7e-11 72.0 164 31.7
Actinidia21194 Actinidia chinensis HOM05D004750 ORTHO05D006207 8.1e-11 71.2 72 56.9
Potri.002G041000 Populus trichocarpa HOM05D004750 ORTHO05D006207 3.1e-10 69.3 41 80.5
Glyma.10G035200 Glycine max HOM05D004750 ORTHO05D006207 5.8e-09 65.1 42 76.2
Dinv34600 Davidia involucrata HOM05D004750 ORTHO05D006207 7.6e-09 64.7 49 71.4
SGA_v2.0_scaffold98G29344 Striga asiatica HOM05D004750 ORTHO05D006207 1.7e-08 63.5 51 56.9
GSVIVG01035735001 Vitis vinifera HOM05D004750 ORTHO05D006207 2.2e-08 63.2 39 76.9


User provided reference genes

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