Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN27G2162 Fragaria x ananassa HOM05D000364 ORTHO05D000235 7.9e-114 414.1 253 100.0
FAN27G3510 Fragaria x ananassa HOM05D000364 ORTHO05D000235 1.1e-86 323.9 216 85.6
FAN20G0196 Fragaria x ananassa HOM05D000364 ORTHO05D000235 9.1e-86 320.9 216 85.2
FvH4_2g39400 Fragaria vesca HOM05D000364 ORTHO05D000235 5.0e-84 315.1 216 88.0
RcHm_v2.0_Chr6g0301601 Rosa chinensis HOM05D000364 ORTHO05D000235 1.4e-73 280.4 210 77.6
MD15G1023100 Malus domestica HOM05D000364 ORTHO05D000235 6.0e-21 105.5 235 46.8
Prupe.1G375000 Prunus persica HOM05D000364 ORTHO05D000235 2.3e-20 103.6 240 48.8
MD08G1026300 Malus domestica HOM05D000364 ORTHO05D000235 8.6e-20 101.7 242 39.7
Atru.chr13.418 Acer truncatum HOM05D000364 ORTHO05D000235 4.3e-19 99.4 158 46.2
CiPaw.07G157900 Carya illinoinensis HOM05D000364 ORTHO05D000235 8.1e-18 95.1 225 37.8
Ciclev10001291m.g Citrus clementina HOM05D000364 ORTHO05D000235 5.2e-17 92.4 162 42.0
Potri.002G032400 Populus trichocarpa HOM05D000364 ORTHO05D000235 3.2e-14 83.2 214 35.5
Manes.18G020600 Manihot esculenta HOM05D000364 ORTHO05D000235 5.4e-14 82.4 165 41.8
Potri.005G230800 Populus trichocarpa HOM05D000364 ORTHO05D000235 1.2e-13 81.3 204 38.7
QL02p009455 Quercus lobata HOM05D000364 ORTHO05D000235 2.1e-13 80.5 162 43.8
Sabra05G0178200 Salix brachista HOM05D000364 ORTHO05D000235 4.6e-13 79.3 150 44.0
Manes.05G155600 Manihot esculenta HOM05D000364 ORTHO05D000235 1.0e-12 78.2 164 42.7
Cfa013866 Carpinus fangiana HOM05D000364 ORTHO05D000235 3.0e-12 76.6 142 43.7
Haze_22543 Corylus avellana HOM05D000364 ORTHO05D000235 6.6e-12 75.5 144 45.1
GSVIVG01009761001 Vitis vinifera HOM05D000364 ORTHO05D000235 1.1e-11 74.7 163 41.7
Sabra02G0026300 Salix brachista HOM05D000364 ORTHO05D000235 1.9e-11 73.9 144 43.1
Duzib116G0408 Durio zibethinus HOM05D000364 ORTHO05D000235 4.3e-11 72.8 161 39.1
Duzib093G0998 Durio zibethinus HOM05D000364 ORTHO05D000235 9.6e-11 71.6 166 41.0
Nn5g29695 Nelumbo nucifera HOM05D000364 ORTHO05D000235 3.6e-10 69.7 157 38.9
Thecc.08G032400 Theobroma cacao HOM05D000364 ORTHO05D000235 8.1e-10 68.6 163 39.9
ClCG05G018730 Citrullus lanatus HOM05D000364 ORTHO05D000235 1.4e-09 67.8 170 37.6
COL.COLO4_26254 Corchorus olitorius HOM05D000364 ORTHO05D000235 1.8e-09 67.4 114 43.0
Gohir.A05G191400 Gossypium hirsutum HOM05D000364 ORTHO05D000235 1.8e-09 67.4 163 38.0
Gohir.D05G194700 Gossypium hirsutum HOM05D000364 ORTHO05D000235 2.4e-09 67.0 163 38.7
TAR376G0747 Trochodendron aralioides HOM05D000364 ORTHO05D000235 4.0e-09 66.2 162 37.7
Gorai.009G199600 Gossypium raimondii HOM05D000364 ORTHO05D000235 1.2e-08 64.7 163 39.3
Nn1g04892 Nelumbo nucifera HOM05D000364 ORTHO05D000235 1.2e-08 64.7 220 30.0
TWI12G0935 Tripterygium wilfordii HOM05D000364 ORTHO05D000235 1.5e-08 64.3 144 41.0
Oeu007028.1 Olea europaea HOM05D000364 ORTHO05D000235 2.6e-08 63.5 167 31.1
CAN.G710.11 Capsicum annuum HOM05D000364 ORTHO05D000235 5.8e-08 62.4 198 35.4
TWI56G0174 Tripterygium wilfordii HOM05D000364 ORTHO05D000235 5.8e-08 62.4 166 39.2
Lalb_Chr23g0266521 Lupinus albus HOM05D000364 ORTHO05D000235 1.7e-07 60.8 154 36.4
Lalb_Chr11g0062231 Lupinus albus HOM05D000364 ORTHO05D000235 2.2e-07 60.5 195 32.3
Oeu052974.1 Olea europaea HOM05D000364 ORTHO05D000235 6.4e-07 58.9 151 34.4
PGSC0003DMG400003746 Solanum tuberosum HOM05D000364 ORTHO05D000235 6.4e-07 58.9 199 35.2
MSTRG.25196 Avicennia marina HOM05D000364 ORTHO05D000235 8.4e-07 58.5 147 35.4
Nitab4.5_0005229g0040 Nicotiana tabacum HOM05D000364 ORTHO05D000235 1.9e-06 57.4 199 30.7
Duzib041G0470 Durio zibethinus HOM05D000364 ORTHO05D000235 2.4e-06 57.0 101 45.5
MSTRG.1254 Avicennia marina HOM05D000364 ORTHO05D000235 3.2e-06 56.6 148 37.2
Nitab4.5_0003265g0040 Nicotiana tabacum HOM05D000364 ORTHO05D000235 3.2e-06 56.6 199 30.2
CSS0024653 Camellia sinensis var. sinensis HOM05D000364 ORTHO05D000235 4.2e-06 56.2 143 34.3
MBI10_g00759_MAGBIO Magnolia biondii HOM05D000364 ORTHO05D000235 5.4e-06 55.8 185 35.1


User provided reference genes

Program Settings