Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN27G2161 Fragaria x ananassa HOM05D005257 ORTHO05D006425 2.3e-85 318.9 171 100.0
FAN27G2011 Fragaria x ananassa HOM05D005257 ORTHO05D006425 2.2e-67 259.2 158 89.9
FvH4_2g11600 Fragaria vesca HOM05D005257 ORTHO05D006425 2.7e-65 252.3 158 88.6
FAN24G1403 Fragaria x ananassa HOM05D005257 ORTHO05D006425 2.7e-65 252.3 158 88.6
FAN15G1561 Fragaria x ananassa HOM05D005257 ORTHO05D006425 2.3e-61 239.2 158 85.4
RcHm_v2.0_Chr6g0270841 Rosa chinensis HOM05D005257 ORTHO05D006425 9.0e-37 157.5 184 59.8
MD12G1008000 Malus domestica HOM05D005257 ORTHO05D006425 3.5e-17 92.4 165 43.0
Cpa.g.sc56.49 Carica papaya HOM05D005257 ORTHO05D006425 4.1e-13 79.0 179 39.7
Ciclev10018934m.g Citrus clementina HOM05D005257 ORTHO05D006425 7.6e-12 74.7 168 37.5
CANSAT35G0669 Cannabis sativa HOM05D005257 ORTHO05D006425 2.2e-11 73.2 170 39.4
Sed0016053 Sechium edule HOM05D005257 ORTHO05D006425 2.9e-11 72.8 107 47.7
MELO3C008815.2 Cucumis melo HOM05D005257 ORTHO05D006425 6.5e-11 71.6 107 47.7
Aqoxy1G00543 Aquilegia oxysepala HOM05D005257 ORTHO05D006425 2.5e-10 69.7 94 45.7
ECA232G0672 Erigeron canadensis HOM05D005257 ORTHO05D006425 2.5e-10 69.7 66 60.6
CsaV3_4G012150 Cucumis sativus L. HOM05D005257 ORTHO05D006425 4.2e-10 68.9 107 47.7
Dinv11935 Davidia involucrata HOM05D005257 ORTHO05D006425 5.5e-10 68.6 99 45.5
Gohir.D11G243400 Gossypium hirsutum HOM05D005257 ORTHO05D006425 5.5e-10 68.6 145 39.3
Gorai.007G258400 Gossypium raimondii HOM05D005257 ORTHO05D006425 5.5e-10 68.6 145 39.3
ClCG04G005430 Citrullus lanatus HOM05D005257 ORTHO05D006425 1.2e-09 67.4 133 39.1
Dinv05572 Davidia involucrata HOM05D005257 ORTHO05D006425 1.6e-09 67.0 100 44.0
MBI05_g42570_MAGBIO Magnolia biondii HOM05D005257 ORTHO05D006425 1.6e-09 67.0 63 58.7
Cc06_g07290 Coffea canephora HOM05D005257 ORTHO05D006425 2.1e-09 66.6 80 47.5
DCAR_003248 Daucus carota HOM05D005257 ORTHO05D006425 2.1e-09 66.6 96 47.9
Atru.chr2.1463 Acer truncatum HOM05D005257 ORTHO05D006425 6.1e-09 65.1 160 36.2
CiPaw.09G164800 Carya illinoinensis HOM05D005257 ORTHO05D006425 6.1e-09 65.1 178 37.6
Gohir.A11G232100 Gossypium hirsutum HOM05D005257 ORTHO05D006425 6.1e-09 65.1 188 36.7
Lj1g0008743 Lotus japonicus HOM05D005257 ORTHO05D006425 7.9e-09 64.7 87 49.4
Lsat_1_v5_gn_9_60281 Lactuca sativa HOM05D005257 ORTHO05D006425 1.0e-08 64.3 143 35.7
Medtr7g086290 Medicago truncatula HOM05D005257 ORTHO05D006425 1.3e-08 63.9 149 39.6
Haze_20460 Corylus avellana HOM05D005257 ORTHO05D006425 1.8e-08 63.5 115 40.0
Nitab4.5_0000098g0080 Nicotiana tabacum HOM05D005257 ORTHO05D006425 1.8e-08 63.5 145 36.6
Sc10g0005500 Simmondsia chinensis HOM05D005257 ORTHO05D006425 1.8e-08 63.5 87 46.0
AL6G29030 Arabidopsis lyrata HOM05D005257 ORTHO05D006425 2.3e-08 63.2 181 37.0
THA.LOC104802876 Tarenaya hassleriana HOM05D005257 ORTHO05D006425 2.3e-08 63.2 122 39.3
Cfa005496 Carpinus fangiana HOM05D005257 ORTHO05D006425 3.9e-08 62.4 59 64.4
Nitab4.5_0001606g0020 Nicotiana tabacum HOM05D005257 ORTHO05D006425 3.9e-08 62.4 150 36.7
AUR62036264 Chenopodium quinoa HOM05D005257 ORTHO05D006425 8.7e-08 61.2 111 41.4
Thhalv10012737m.g Eutrema salsugineum HOM05D005257 ORTHO05D006425 8.7e-08 61.2 175 33.7
SGA_v2.0_scaffold31G12800 Striga asiatica HOM05D005257 ORTHO05D006425 1.1e-07 60.8 73 53.4
arahy.Tifrunner.gnm1.ann1.DQ02GG Arachis hypogaea HOM05D005257 ORTHO05D006425 1.5e-07 60.5 101 43.6
BolC2t06856H Brassica oleracea HOM05D005257 ORTHO05D006425 1.5e-07 60.5 131 35.9
Hma1.2p1_0768F.1_g215600 Hydrangea macrophylla HOM05D005257 ORTHO05D006425 1.5e-07 60.5 59 55.9
Duzib177G0708 Durio zibethinus HOM05D005257 ORTHO05D006425 1.9e-07 60.1 175 34.9
Hma1.2p1_0768F.1_g215590 Hydrangea macrophylla HOM05D005257 ORTHO05D006425 1.9e-07 60.1 194 33.5
PSO339G0351 Papaver somniferum HOM05D005257 ORTHO05D006425 2.5e-07 59.7 163 35.6
PSO384G0627 Papaver somniferum HOM05D005257 ORTHO05D006425 2.5e-07 59.7 180 35.6
Actinidia21524 Actinidia chinensis HOM05D005257 ORTHO05D006425 3.3e-07 59.3 148 39.2
Aa31LG11G11610 Aethionema arabicum HOM05D005257 ORTHO05D006425 3.3e-07 59.3 143 37.1
ATR0697G033 Amborella trichopoda HOM05D005257 ORTHO05D006425 3.3e-07 59.3 131 35.1
PGR042G1596 Punica granatum HOM05D005257 ORTHO05D006425 4.3e-07 58.9 111 42.3
C02p09500 Brassica napus HOM05D005257 ORTHO05D006425 5.7e-07 58.5 152 35.5
Carub.0006s1614 Capsella rubella HOM05D005257 ORTHO05D006425 5.7e-07 58.5 102 39.2
HanXRQChr12g0354211 Helianthus annuus HOM05D005257 ORTHO05D006425 5.7e-07 58.5 183 32.8
Lalb_Chr10g0095341 Lupinus albus HOM05D005257 ORTHO05D006425 5.7e-07 58.5 142 35.2
CSS0043158 Camellia sinensis var. sinensis HOM05D005257 ORTHO05D006425 7.4e-07 58.2 75 46.7
Lj1g0012853 Lotus japonicus HOM05D005257 ORTHO05D006425 7.4e-07 58.2 107 40.2
BraA02t05418Z Brassica rapa HOM05D005257 ORTHO05D006425 9.7e-07 57.8 141 35.5
HanXRQChr02g0058981 Helianthus annuus HOM05D005257 ORTHO05D006425 9.7e-07 57.8 183 32.8
PGR042G3559 Punica granatum HOM05D005257 ORTHO05D006425 9.7e-07 57.8 183 33.9
Ca_08293_v3 Cicer arietinum L. HOM05D005257 ORTHO05D006425 1.3e-06 57.4 69 52.2
MSTRG.19351 Avicennia marina HOM05D005257 ORTHO05D006425 1.6e-06 57.0 157 36.9
A02p04570 Brassica napus HOM05D005257 ORTHO05D006425 1.6e-06 57.0 157 35.0
COL.COLO4_28604 Corchorus olitorius HOM05D005257 ORTHO05D006425 1.6e-06 57.0 156 37.2
Peaxi162Scf00117g00415 Petunia axillaris HOM05D005257 ORTHO05D006425 1.6e-06 57.0 115 38.3
GSVIVG01027853001 Vitis vinifera HOM05D005257 ORTHO05D006425 2.2e-06 56.6 81 49.4
Glyma.19G114400 Glycine max HOM05D005257 ORTHO05D006425 2.8e-06 56.2 89 44.9
Thecc.05G245000 Theobroma cacao HOM05D005257 ORTHO05D006425 2.8e-06 56.2 188 30.3
Ah.12g060700 Amaranthus hybridus HOM05D005257 ORTHO05D006425 3.7e-06 55.8 113 42.5
Cfa017688 Carpinus fangiana HOM05D005257 ORTHO05D006425 3.7e-06 55.8 158 34.8
Eucgr.A02125 Eucalyptus grandis HOM05D005257 ORTHO05D006425 3.7e-06 55.8 161 33.5
Ca_29914_v3 Cicer arietinum L. HOM05D005257 ORTHO05D006425 4.8e-06 55.5 165 33.3
CDE10G0660 Ceratophyllum demersum HOM05D005257 ORTHO05D006425 6.3e-06 55.1 176 33.0
Nn1g06286 Nelumbo nucifera HOM05D005257 ORTHO05D006425 6.3e-06 55.1 183 32.8
AUR62039715 Chenopodium quinoa HOM05D005257 ORTHO05D006425 8.2e-06 54.7 94 42.6
Rhsim08G0079300 Rhododendron simsii HOM05D005257 ORTHO05D006425 8.2e-06 54.7 132 37.1
TWI31G1180 Tripterygium wilfordii HOM05D005257 ORTHO05D006425 8.2e-06 54.7 129 37.2


User provided reference genes

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