Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN27G1656 Fragaria x ananassa HOM05D005828 ORTHO05D006822 6.6e-52 207.2 114 100.0
FvH4_2g26520 Fragaria vesca HOM05D005828 ORTHO05D006822 3.9e-44 181.4 114 92.1
FAN24G3109 Fragaria x ananassa HOM05D005828 ORTHO05D006822 3.9e-44 181.4 114 92.1
FAN15G3227 Fragaria x ananassa HOM05D005828 ORTHO05D006822 1.6e-42 176.0 114 85.1
RcHm_v2.0_Chr6g0295391 Rosa chinensis HOM05D005828 ORTHO05D006822 2.2e-39 165.6 100 88.0
MD15G1353400 Malus domestica HOM05D005828 ORTHO05D006822 2.8e-34 148.7 101 81.2
Prupe.1G501700 Prunus persica HOM05D005828 ORTHO05D006822 1.4e-33 146.4 101 79.2
Duzib041G0320 Durio zibethinus HOM05D005828 ORTHO05D006822 2.3e-33 145.6 104 77.9
Potri.002G086300 Populus trichocarpa HOM05D005828 ORTHO05D006822 8.9e-33 143.7 99 76.8
Ciclev10002958m.g Citrus clementina HOM05D005828 ORTHO05D006822 1.2e-32 143.3 101 77.2
CiPaw.02G169200 Carya illinoinensis HOM05D005828 ORTHO05D006822 2.0e-32 142.5 100 76.0
Gohir.D06G043500 Gossypium hirsutum HOM05D005828 ORTHO05D006822 2.0e-32 142.5 104 76.0
Gorai.010G048600 Gossypium raimondii HOM05D005828 ORTHO05D006822 2.0e-32 142.5 101 77.2
Nn1g08691 Nelumbo nucifera HOM05D005828 ORTHO05D006822 3.4e-32 141.7 101 77.2
Gohir.A06G042500 Gossypium hirsutum HOM05D005828 ORTHO05D006822 4.4e-32 141.4 101 76.2
Cpa.g.sc70.13 Carica papaya HOM05D005828 ORTHO05D006822 5.8e-32 141.0 99 74.7
MD08G1168000 Malus domestica HOM05D005828 ORTHO05D006822 1.3e-31 139.8 81 87.7
Dinv40388 Davidia involucrata HOM05D005828 ORTHO05D006822 1.7e-31 139.4 101 76.2
Sed0016516 Sechium edule HOM05D005828 ORTHO05D006822 2.9e-31 138.7 98 77.6
Psat2g078520 Pisum sativum HOM05D005828 ORTHO05D006822 3.8e-31 138.3 99 73.7
Lj1g0023360 Lotus japonicus HOM05D005828 ORTHO05D006822 4.9e-31 137.9 102 74.5
QL09p036513 Quercus lobata HOM05D005828 ORTHO05D006822 4.9e-31 137.9 100 77.0
Actinidia23063 Actinidia chinensis HOM05D005828 ORTHO05D006822 8.4e-31 137.1 99 72.7
Eucgr.F03768 Eucalyptus grandis HOM05D005828 ORTHO05D006822 8.4e-31 137.1 99 72.7
Dinv27340 Davidia involucrata HOM05D005828 ORTHO05D006822 1.1e-30 136.7 99 74.7
Phvul.008G165500 Phaseolus vulgaris HOM05D005828 ORTHO05D006822 1.1e-30 136.7 96 76.0
PGR042G1795 Punica granatum HOM05D005828 ORTHO05D006822 1.4e-30 136.3 96 75.0
TAR628G1302 Trochodendron aralioides HOM05D005828 ORTHO05D006822 1.4e-30 136.3 100 71.0
CSS0005937 Camellia sinensis var. sinensis HOM05D005828 ORTHO05D006822 1.9e-30 136.0 99 72.7
Glyma.14G162800 Glycine max HOM05D005828 ORTHO05D006822 1.9e-30 136.0 96 75.0
Manes.18G074748 Manihot esculenta HOM05D005828 ORTHO05D006822 1.9e-30 136.0 99 72.7
Medtr5g059050 Medicago truncatula HOM05D005828 ORTHO05D006822 1.9e-30 136.0 97 75.3
Duzib093G2142 Durio zibethinus HOM05D005828 ORTHO05D006822 2.4e-30 135.6 101 73.3
Migut.G00970 Erythranthe guttata HOM05D005828 ORTHO05D006822 3.2e-30 135.2 100 72.0
Thecc.08G121200 Theobroma cacao HOM05D005828 ORTHO05D006822 3.2e-30 135.2 98 75.5
CSS0009962 Camellia sinensis var. sinensis HOM05D005828 ORTHO05D006822 5.4e-30 134.4 106 68.9
arahy.Tifrunner.gnm1.ann1.IQQ61N Arachis hypogaea HOM05D005828 ORTHO05D006822 7.1e-30 134.0 96 74.0
CANSAT64G1100 Cannabis sativa HOM05D005828 ORTHO05D006822 7.1e-30 134.0 100 74.0
Glyma.13G081900 Glycine max HOM05D005828 ORTHO05D006822 7.1e-30 134.0 96 74.0
TWI56G1238 Tripterygium wilfordii HOM05D005828 ORTHO05D006822 7.1e-30 134.0 99 71.7
Rhsim10G0081200 Rhododendron simsii HOM05D005828 ORTHO05D006822 9.2e-30 133.7 99 70.7
Sabra02G0067700 Salix brachista HOM05D005828 ORTHO05D006822 1.2e-29 133.3 117 62.4
Hma1.2p1_0248F.1_g102070 Hydrangea macrophylla HOM05D005828 ORTHO05D006822 1.6e-29 132.9 98 76.5
Migut.C01150 Erythranthe guttata HOM05D005828 ORTHO05D006822 2.1e-29 132.5 94 72.3
Lalb_Chr04g0253341 Lupinus albus HOM05D005828 ORTHO05D006822 2.1e-29 132.5 96 71.9
Ah.01g019990 Amaranthus hybridus HOM05D005828 ORTHO05D006822 3.5e-29 131.7 95 72.6
ClCG11G015600 Citrullus lanatus HOM05D005828 ORTHO05D006822 3.5e-29 131.7 99 73.7
Migut.K01196 Erythranthe guttata HOM05D005828 ORTHO05D006822 3.5e-29 131.7 89 75.3
Oeu050902.1 Olea europaea HOM05D005828 ORTHO05D006822 3.5e-29 131.7 96 74.0
Aqoxy6G00155 Aquilegia oxysepala HOM05D005828 ORTHO05D006822 4.6e-29 131.3 92 75.0
QL09p035324 Quercus lobata HOM05D005828 ORTHO05D006822 4.6e-29 131.3 77 88.3
AUR62011415 Chenopodium quinoa HOM05D005828 ORTHO05D006822 6.0e-29 131.0 93 73.1
AUR62022881 Chenopodium quinoa HOM05D005828 ORTHO05D006822 6.0e-29 131.0 93 73.1
MBI11_g22242_MAGBIO Magnolia biondii HOM05D005828 ORTHO05D006822 6.0e-29 131.0 99 71.7
AUR62016643 Chenopodium quinoa HOM05D005828 ORTHO05D006822 7.8e-29 130.6 97 70.1
Cc10_g15090 Coffea canephora HOM05D005828 ORTHO05D006822 1.0e-28 130.2 99 71.7
Haze_00481 Corylus avellana HOM05D005828 ORTHO05D006822 1.0e-28 130.2 76 88.2
RhsimUnG0054200 Rhododendron simsii HOM05D005828 ORTHO05D006822 1.0e-28 130.2 108 66.7
CAN.G48.25 Capsicum annuum HOM05D005828 ORTHO05D006822 1.3e-28 129.8 100 69.0
Nn7g37602 Nelumbo nucifera HOM05D005828 ORTHO05D006822 1.3e-28 129.8 95 75.8
Hund16842 Selenicereus undatus HOM05D005828 ORTHO05D006822 1.3e-28 129.8 95 70.5
Os12g0481200 Oryza sativa ssp. japonica HOM05D005828 ORTHO05D006822 1.7e-28 129.4 87 78.2
Ca_03724_v3 Cicer arietinum L. HOM05D005828 ORTHO05D006822 2.3e-28 129.0 95 74.7
Atru.chr13.1407 Acer truncatum HOM05D005828 ORTHO05D006822 3.0e-28 128.6 94 73.4
Nitab4.5_0010023g0030 Nicotiana tabacum HOM05D005828 ORTHO05D006822 3.0e-28 128.6 99 71.7
GSVIVG01013096001 Vitis vinifera HOM05D005828 ORTHO05D006822 3.0e-28 128.6 93 75.3
SGA_v2.0_scaffold52G18982 Striga asiatica HOM05D005828 ORTHO05D006822 3.9e-28 128.3 87 74.7
TPR.G8500 Trifolium pratense HOM05D005828 ORTHO05D006822 6.6e-28 127.5 101 71.3
AL1G35150 Arabidopsis lyrata HOM05D005828 ORTHO05D006822 1.5e-27 126.3 98 69.4
AL1G35290 Arabidopsis lyrata HOM05D005828 ORTHO05D006822 1.5e-27 126.3 98 69.4
BcaC06g34917 Brassica carinata HOM05D005828 ORTHO05D006822 1.5e-27 126.3 93 73.1
C07p21820 Brassica napus HOM05D005828 ORTHO05D006822 1.5e-27 126.3 93 73.1
BolC7t42713H Brassica oleracea HOM05D005828 ORTHO05D006822 1.5e-27 126.3 93 73.1
Carub.0001s2142 Capsella rubella HOM05D005828 ORTHO05D006822 1.5e-27 126.3 98 69.4
Nitab4.5_0002816g0110 Nicotiana tabacum HOM05D005828 ORTHO05D006822 1.5e-27 126.3 99 71.7
Peaxi162Scf00241g00022 Petunia axillaris HOM05D005828 ORTHO05D006822 1.5e-27 126.3 99 69.7
THA.LOC104810143 Tarenaya hassleriana HOM05D005828 ORTHO05D006822 1.9e-27 125.9 92 72.8
CDE01G0185 Ceratophyllum demersum HOM05D005828 ORTHO05D006822 2.5e-27 125.6 88 72.7
Sopen03g024020 Solanum pennellii HOM05D005828 ORTHO05D006822 3.3e-27 125.2 99 69.7
Rhsim02G0128100 Rhododendron simsii HOM05D005828 ORTHO05D006822 4.3e-27 124.8 98 66.3
EL10Ac9g21807 Beta vulgaris HOM05D005828 ORTHO05D006822 5.6e-27 124.4 89 73.0
Zm00001eb318220 Zea mays HOM05D005828 ORTHO05D006822 5.6e-27 124.4 94 69.1
Aa31LG7G5940 Aethionema arabicum HOM05D005828 ORTHO05D006822 7.3e-27 124.0 97 71.1
AT1G21930 Arabidopsis thaliana HOM05D005828 ORTHO05D006822 9.6e-27 123.6 91 72.5
CARHR022310 Cardamine hirsuta HOM05D005828 ORTHO05D006822 9.6e-27 123.6 94 70.2
Solyc03g093220.3 Solanum lycopersicum HOM05D005828 ORTHO05D006822 9.6e-27 123.6 99 68.7
BcaB03g14247 Brassica carinata HOM05D005828 ORTHO05D006822 1.2e-26 123.2 98 67.3
AT3G42150 Arabidopsis thaliana HOM05D005828 ORTHO05D006822 2.1e-26 122.5 91 71.4
Sc01g0001360 Simmondsia chinensis HOM05D005828 ORTHO05D006822 2.1e-26 122.5 92 69.6
A09p42800 Brassica napus HOM05D005828 ORTHO05D006822 2.8e-26 122.1 93 71.0
BraA09t39754Z Brassica rapa HOM05D005828 ORTHO05D006822 2.8e-26 122.1 93 71.0
vmacro15901 Vaccinium macrocarpon HOM05D005828 ORTHO05D006822 2.8e-26 122.1 98 66.3
BcaC05g26118 Brassica carinata HOM05D005828 ORTHO05D006822 3.6e-26 121.7 93 71.0
BcaC05g26120 Brassica carinata HOM05D005828 ORTHO05D006822 3.6e-26 121.7 93 71.0
C05p20980 Brassica napus HOM05D005828 ORTHO05D006822 3.6e-26 121.7 93 71.0
BolC5t30796H Brassica oleracea HOM05D005828 ORTHO05D006822 3.6e-26 121.7 93 71.0
PSO170G1674 Papaver somniferum HOM05D005828 ORTHO05D006822 3.6e-26 121.7 88 69.3
HPP92_010723 Vanilla planifolia HOM05D005828 ORTHO05D006822 3.6e-26 121.7 93 67.7
Sp1g19470 Schrenkiella parvula HOM05D005828 ORTHO05D006822 4.7e-26 121.3 91 71.4
CsaV3_4G028420 Cucumis sativus L. HOM05D005828 ORTHO05D006822 8.1e-26 120.6 77 81.8
PGSC0003DMG400014827 Solanum tuberosum HOM05D005828 ORTHO05D006822 8.1e-26 120.6 83 77.1
MELO3C010460.2 Cucumis melo HOM05D005828 ORTHO05D006822 1.1e-25 120.2 77 81.8
ECA246G1275 Erigeron canadensis HOM05D005828 ORTHO05D006822 1.1e-25 120.2 90 68.9
BcaB07g32190 Brassica carinata HOM05D005828 ORTHO05D006822 1.8e-25 119.4 93 69.9
Thhalv10009188m.g Eutrema salsugineum HOM05D005828 ORTHO05D006822 1.8e-25 119.4 91 70.3
HanXRQChr12g0379421 Helianthus annuus HOM05D005828 ORTHO05D006822 2.4e-25 119.0 88 67.0
unitig_22.g6732 Utricularia gibba HOM05D005828 ORTHO05D006822 3.1e-25 118.6 99 64.6
ATR0021G028 Amborella trichopoda HOM05D005828 ORTHO05D006822 6.9e-25 117.5 96 64.6
A07p14860 Brassica napus HOM05D005828 ORTHO05D006822 6.9e-25 117.5 83 74.7
BcaB07g32192 Brassica carinata HOM05D005828 ORTHO05D006822 1.2e-24 116.7 93 68.8
DCAR_014107 Daucus carota HOM05D005828 ORTHO05D006822 2.0e-24 115.9 101 57.4
Lsat_1_v5_gn_9_83901 Lactuca sativa HOM05D005828 ORTHO05D006822 2.6e-24 115.5 89 71.9
SalBow1G4500 Salvia bowleyana HOM05D005828 ORTHO05D006822 2.6e-24 115.5 76 80.3
HPP92_010646 Vanilla planifolia HOM05D005828 ORTHO05D006822 3.4e-24 115.2 93 64.5
PSO528G0081 Papaver somniferum HOM05D005828 ORTHO05D006822 4.9e-23 111.3 71 76.1
DCAR_014096 Daucus carota HOM05D005828 ORTHO05D006822 4.2e-22 108.2 67 77.6
BolC5t30794H Brassica oleracea HOM05D005828 ORTHO05D006822 6.0e-21 104.4 91 64.8
SHI08265 Sapria himalayana HOM05D005828 ORTHO05D006822 5.1e-20 101.3 74 71.6
BcaC07g42575 Brassica carinata HOM05D005828 ORTHO05D006822 8.1e-18 94.0 92 57.6
MD03G1196900 Malus domestica HOM05D005828 ORTHO05D006822 1.2e-16 90.1 58 77.6
Medtr5g058700 Medicago truncatula HOM05D005828 ORTHO05D006822 5.8e-16 87.8 97 56.7
SEGI_28823 Sequoiadendron giganteum HOM05D005828 ORTHO05D006822 1.3e-15 86.7 59 76.3
Mapoly0038s0094 Marchantia polymorpha HOM05D005828 ORTHO05D006822 2.4e-14 82.4 70 54.3
Zm00001eb102630 Zea mays HOM05D005828 ORTHO05D006822 2.4e-14 82.4 88 56.8
Pp3c4_22520 Physcomitrium patens HOM05D005828 ORTHO05D006822 2.7e-13 79.0 59 57.6
SMO232G0111 Selaginella moellendorffii HOM05D005828 ORTHO05D006822 1.3e-10 70.1 49 65.3
AagrBONN_evm.TU.Sc2ySwM_368.871 Anthoceros agrestis HOM05D005828 ORTHO05D006822 8.1e-10 67.4 56 62.5
Lalb_Chr17g0343871 Lupinus albus HOM05D005828 ORTHO05D006822 8.1e-10 67.4 53 66.0
BcaB03g11887 Brassica carinata HOM05D005828 ORTHO05D006822 1.4e-09 66.6 48 66.7
BcaNung06341 Brassica carinata HOM05D005828 ORTHO05D006822 1.4e-09 66.6 48 66.7
BcaNung06770 Brassica carinata HOM05D005828 ORTHO05D006822 1.4e-09 66.6 48 66.7


User provided reference genes

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