Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN27G1610 Fragaria x ananassa HOM05D007522 ORTHO05D009518 1.0e-163 580.1 311 100.0
FAN24G0147 Fragaria x ananassa HOM05D007522 ORTHO05D009518 3.4e-151 538.5 337 88.7
FAN15G2839 Fragaria x ananassa HOM05D007522 ORTHO05D009518 1.4e-107 393.7 222 99.1
FvH4_2g30000 Fragaria vesca HOM05D007522 ORTHO05D009518 3.0e-107 392.5 231 95.2
RcHm_v2.0_Chr6g0312911 Rosa chinensis HOM05D007522 ORTHO05D009518 1.2e-92 344.0 231 83.5
Prupe.1G467900 Prunus persica HOM05D007522 ORTHO05D009518 4.2e-77 292.4 231 72.3
MD15G1116400 Malus domestica HOM05D007522 ORTHO05D009518 6.6e-70 268.5 255 63.1
TPR.G34679 Trifolium pratense HOM05D007522 ORTHO05D009518 1.7e-62 243.8 223 61.9
Gohir.D13G209500 Gossypium hirsutum HOM05D007522 ORTHO05D009518 4.3e-61 239.2 225 60.9
Gorai.013G238600 Gossypium raimondii HOM05D007522 ORTHO05D009518 9.5e-61 238.0 225 60.9
Lalb_Chr08g0243841 Lupinus albus HOM05D007522 ORTHO05D009518 9.5e-61 238.0 224 60.3
COL.COLO4_24044 Corchorus olitorius HOM05D007522 ORTHO05D009518 1.2e-60 237.7 268 54.5
Gohir.A13G204200 Gossypium hirsutum HOM05D007522 ORTHO05D009518 1.0e-59 234.6 225 60.4
Lj1g0002015 Lotus japonicus HOM05D007522 ORTHO05D009518 1.0e-59 234.6 224 61.2
Sabra06G0193900 Salix brachista HOM05D007522 ORTHO05D009518 1.4e-59 234.2 226 61.1
Glyma.06G072500 Glycine max HOM05D007522 ORTHO05D009518 6.8e-59 231.9 224 58.0
Potri.006G247900 Populus trichocarpa HOM05D007522 ORTHO05D009518 1.3e-57 227.6 227 61.2
arahy.Tifrunner.gnm1.ann1.J4BCXN Arachis hypogaea HOM05D007522 ORTHO05D009518 2.2e-57 226.9 224 58.5
Thecc.09G145600 Theobroma cacao HOM05D007522 ORTHO05D009518 2.2e-57 226.9 225 60.0
Medtr3g108530 Medicago truncatula HOM05D007522 ORTHO05D009518 2.9e-57 226.5 224 59.4
QL12p031480 Quercus lobata HOM05D007522 ORTHO05D009518 3.7e-57 226.1 216 61.6
Phvul.009G097000 Phaseolus vulgaris HOM05D007522 ORTHO05D009518 6.4e-57 225.3 224 57.1
Ca_15704_v3 Cicer arietinum L. HOM05D000186 ORTHO05D001124 3.2e-56 223.0 277 53.4
GSVIVG01035795001 Vitis vinifera HOM05D007522 ORTHO05D009518 1.2e-55 221.1 225 55.6
VMungo1309G1471 Vigna mungo HOM05D007522 ORTHO05D009518 6.0e-55 218.8 223 56.5
Duzib187G1360 Durio zibethinus HOM05D007522 ORTHO05D009518 1.0e-54 218.0 208 61.1
Thhalv10025779m.g Eutrema salsugineum HOM05D007522 ORTHO05D009518 3.9e-54 216.1 223 57.4
CARHR240530 Cardamine hirsuta HOM05D007522 ORTHO05D009518 6.6e-54 215.3 224 56.2
Manes.03G065616 Manihot esculenta HOM05D007522 ORTHO05D009518 8.6e-54 214.9 221 59.3
Carub.0007s0799 Capsella rubella HOM05D007522 ORTHO05D009518 1.6e-52 210.7 224 55.8
AL7G19200 Arabidopsis lyrata HOM05D007522 ORTHO05D009518 2.8e-52 209.9 222 55.0
TAR383G0977 Trochodendron aralioides HOM05D007522 ORTHO05D009518 2.8e-52 209.9 225 55.1
Sp7g30340 Schrenkiella parvula HOM05D007522 ORTHO05D009518 5.2e-51 205.7 224 54.9
PGR044G0714 Punica granatum HOM05D007522 ORTHO05D009518 6.8e-51 205.3 220 55.9
BraA01t00551Z Brassica rapa HOM05D007522 ORTHO05D009518 2.6e-50 203.4 224 55.8
Rhsim02G0189000 Rhododendron simsii HOM05D007522 ORTHO05D009518 2.6e-50 203.4 210 55.2
AT4G32560 Arabidopsis thaliana HOM05D007522 ORTHO05D009518 4.4e-50 202.6 224 54.0
CiPaw.07G218500 Carya illinoinensis HOM05D007522 ORTHO05D009518 4.4e-50 202.6 210 58.1
Aa31LG4G11730 Aethionema arabicum HOM05D007522 ORTHO05D009518 5.8e-50 202.2 240 51.2
A01p05830 Brassica napus HOM05D007522 ORTHO05D009518 7.5e-50 201.8 224 55.4
Sed0015375 Sechium edule HOM05D007522 ORTHO05D009518 9.8e-50 201.4 224 52.7
C01p06400 Brassica napus HOM05D007522 ORTHO05D009518 1.3e-49 201.1 224 55.4
BolC1t00636H Brassica oleracea HOM05D007522 ORTHO05D009518 1.3e-49 201.1 224 55.4
CSS0007980 Camellia sinensis var. sinensis HOM05D007522 ORTHO05D009518 2.2e-49 200.3 228 53.1
Eucgr.C02850 Eucalyptus grandis HOM05D007522 ORTHO05D009518 2.2e-49 200.3 217 53.9
Actinidia13430 Actinidia chinensis HOM05D007522 ORTHO05D009518 3.7e-49 199.5 216 54.6
BcaC09g52047 Brassica carinata HOM05D007522 ORTHO05D009518 3.7e-49 199.5 225 54.7
Eucgr.C02839 Eucalyptus grandis HOM05D007522 ORTHO05D009518 4.9e-49 199.1 230 52.6
arahy.Tifrunner.gnm1.ann1.EE81AI Arachis hypogaea HOM05D007522 ORTHO05D009518 1.1e-48 198.0 181 63.0
Ciclev10009234m.g Citrus clementina HOM05D007522 ORTHO05D009518 2.1e-47 193.7 211 57.8
Psat0s1782g0120 Pisum sativum HOM05D007522 ORTHO05D009518 4.6e-47 192.6 209 55.5
Oeu014660.1 Olea europaea HOM05D007522 ORTHO05D009518 7.8e-47 191.8 225 48.9
THA.LOC104819887 Tarenaya hassleriana HOM05D007522 ORTHO05D009518 1.0e-46 191.4 258 49.2
MELO3C011219.2 Cucumis melo HOM05D007522 ORTHO05D009518 6.6e-46 188.7 225 51.1
Aqoxy2G01954 Aquilegia oxysepala HOM05D007522 ORTHO05D009518 8.6e-46 188.3 219 52.5
Eucgr.C02843 Eucalyptus grandis HOM05D007522 ORTHO05D009518 9.5e-45 184.9 198 54.5
CANSAT11G2673 Cannabis sativa HOM05D007522 ORTHO05D009518 1.2e-44 184.5 175 61.7
Eucgr.C02854 Eucalyptus grandis HOM05D007522 ORTHO05D009518 8.1e-44 181.8 211 52.1
MSTRG.25867 Avicennia marina HOM05D007522 ORTHO05D009518 1.1e-43 181.4 216 48.6
CsaV3_2G031690 Cucumis sativus L. HOM05D007522 ORTHO05D009518 1.4e-43 181.0 216 51.9
Eucgr.L02345 Eucalyptus grandis HOM05D007522 ORTHO05D009518 1.8e-43 180.6 211 51.7
Atru.chr7.2341 Acer truncatum HOM05D007522 ORTHO05D009518 5.2e-43 179.1 168 63.1
Peaxi162Scf00267g00097 Petunia axillaris HOM05D007522 ORTHO05D009518 2.0e-42 177.2 221 48.0
HanXRQChr13g0402121 Helianthus annuus HOM05D007522 ORTHO05D009518 3.4e-42 176.4 223 48.0
PSO063G3677 Papaver somniferum HOM05D007522 ORTHO05D009518 4.4e-42 176.0 225 51.6
Migut.A00284 Erythranthe guttata HOM05D007522 ORTHO05D009518 5.8e-42 175.6 215 48.4
ATR0083G062 Amborella trichopoda HOM05D007522 ORTHO05D009518 8.3e-41 171.8 224 45.1
Dinv30202 Davidia involucrata HOM05D007522 ORTHO05D009518 1.9e-40 170.6 183 55.2
PSO782G1743 Papaver somniferum HOM05D007522 ORTHO05D009518 1.9e-40 170.6 225 50.7
Solyc06g011403.1 Solanum lycopersicum HOM05D007522 ORTHO05D009518 1.9e-40 170.6 215 46.5
Sopen06g006080 Solanum pennellii HOM05D007522 ORTHO05D009518 7.1e-40 168.7 215 46.5
EL10Ac2g02553 Beta vulgaris HOM05D007522 ORTHO05D009518 3.5e-39 166.4 214 47.7
Cc11_g01290 Coffea canephora HOM05D007522 ORTHO05D009518 7.8e-39 165.2 189 52.4
Nn8g39310 Nelumbo nucifera HOM05D007522 ORTHO05D009518 2.3e-38 163.7 222 47.7
Lsat_1_v5_gn_6_22860 Lactuca sativa HOM05D007522 ORTHO05D009518 2.8e-36 156.8 195 49.7
ECA233G0736 Erigeron canadensis HOM05D007522 ORTHO05D009518 4.7e-36 156.0 219 44.7
vmacro11126 Vaccinium macrocarpon HOM05D007522 ORTHO05D009518 2.4e-35 153.7 195 50.8
AUR62032367 Chenopodium quinoa HOM05D007522 ORTHO05D009518 6.8e-35 152.1 172 52.3
MD08G1138600 Malus domestica HOM05D007522 ORTHO05D009518 4.2e-32 142.9 130 64.6
SalBow8G3415 Salvia bowleyana HOM05D007522 ORTHO05D009518 2.7e-31 140.2 107 63.6
AagrBONN_evm.TU.Sc2ySwM_117.2977 Anthoceros agrestis HOM05D007522 ORTHO05D009518 4.6e-31 139.4 219 41.1
Haze_21613 Corylus avellana HOM05D007522 ORTHO05D009518 1.7e-30 137.5 224 43.8
Ah.10g025820 Amaranthus hybridus HOM05D007522 ORTHO05D009518 2.5e-29 133.7 149 52.3
Pp3c10_19840 Physcomitrium patens HOM05D007522 ORTHO05D009518 7.3e-29 132.1 239 36.8
Cpa.g.sc91.26 Carica papaya HOM05D007522 ORTHO05D009518 1.8e-27 127.5 203 44.3
HPP92_008699 Vanilla planifolia HOM05D002348 ORTHO05D002512 8.4e-25 118.6 222 37.8
CDE02G2364 Ceratophyllum demersum HOM05D007522 ORTHO05D009518 1.9e-24 117.5 240 37.5
Mapoly0015s0053 Marchantia polymorpha HOM05D007522 ORTHO05D009518 1.9e-24 117.5 222 35.6
AUR62024852 Chenopodium quinoa HOM05D007522 ORTHO05D009518 4.6e-23 112.8 224 40.6
Glyma.04G070700 Glycine max HOM05D007522 ORTHO05D009518 3.4e-18 96.7 137 42.3
MD08G1138500 Malus domestica HOM05D007522 ORTHO05D009518 1.1e-16 91.7 56 87.5
CBR_g51241 Chara braunii HOM05D007522 ORTHO05D009518 5.5e-16 89.4 233 30.0
CBR_g75925 Chara braunii HOM05D007522 ORTHO05D009518 4.8e-12 76.3 105 37.1
Cfa021321 Carpinus fangiana HOM05D007522 ORTHO05D009518 2.6e-10 70.5 88 48.9


User provided reference genes

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