Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN27G1573 Fragaria x ananassa HOM05D000051 ORTHO05D000015 1.3e-69 266.2 128 100.0
FvH4_2g37070 Fragaria vesca HOM05D000051 ORTHO05D000015 1.8e-50 202.6 99 98.0
RcHm_v2.0_Chr6g0304711 Rosa chinensis HOM05D000051 ORTHO05D000015 2.5e-44 182.2 99 85.9
FAN20G2725 Fragaria x ananassa HOM05D000051 ORTHO05D000015 7.2e-39 164.1 85 90.6
FAN15G3129 Fragaria x ananassa HOM05D000051 ORTHO05D000015 1.4e-18 96.7 50 96.0
FvH4_5g24470 Fragaria vesca HOM05D012937 ORTHO05D000015 7.0e-18 94.4 97 53.6
FAN13G1655 Fragaria x ananassa HOM05D012937 ORTHO05D000015 7.0e-18 94.4 97 53.6
FAN04G2306 Fragaria x ananassa HOM05D012937 ORTHO05D000015 1.6e-17 93.2 97 52.6
FAN18G0789 Fragaria x ananassa HOM05D012937 ORTHO05D000015 7.7e-17 90.9 97 52.6
MD03G1255400 Malus domestica HOM05D000051 ORTHO05D000015 1.2e-14 83.6 97 47.4
FAN25G1937 Fragaria x ananassa HOM05D000051 ORTHO05D000015 2.1e-14 82.8 93 48.4
FvH4_3g33400 Fragaria vesca HOM05D000051 ORTHO05D000015 3.6e-14 82.0 93 48.4
FAN16G3673 Fragaria x ananassa HOM05D000051 ORTHO05D000015 1.0e-13 80.5 93 48.4
Prupe.4G158800 Prunus persica HOM05D000051 ORTHO05D000015 1.4e-13 80.1 97 47.4
FAN10G1889 Fragaria x ananassa HOM05D000051 ORTHO05D000015 1.8e-13 79.7 74 54.1
Prupe.4G158900 Prunus persica HOM05D000051 ORTHO05D000015 1.8e-13 79.7 89 47.2
Prupe.4G151700 Prunus persica HOM05D000051 ORTHO05D000015 5.2e-13 78.2 92 43.5
RcHm_v2.0_Chr5g0060771 Rosa chinensis HOM05D000051 ORTHO05D000015 6.8e-13 77.8 105 44.8
FAN11G0701 Fragaria x ananassa HOM05D000051 ORTHO05D000015 8.8e-13 77.4 89 46.1
FvH4_1g00860 Fragaria vesca HOM05D000051 ORTHO05D000015 1.2e-12 77.0 93 44.1
FAN28G2792 Fragaria x ananassa HOM05D000051 ORTHO05D000015 1.2e-12 77.0 93 44.1
FvH4_3g17060 Fragaria vesca HOM05D000051 ORTHO05D000015 1.5e-12 76.6 89 46.1
FAN23G2828 Fragaria x ananassa HOM05D000051 ORTHO05D000015 1.5e-12 76.6 93 44.1
FAN26G3357 Fragaria x ananassa HOM05D000051 ORTHO05D000015 2.6e-12 75.9 101 42.6
RcHm_v2.0_Chr4g0417401 Rosa chinensis HOM05D000051 ORTHO05D000015 2.6e-12 75.9 89 44.9
FAN11G1568 Fragaria x ananassa HOM05D000051 ORTHO05D000015 4.4e-12 75.1 99 44.4
FAN25G3081 Fragaria x ananassa HOM05D000051 ORTHO05D000015 4.4e-12 75.1 89 46.1
FvH4_3g17080 Fragaria vesca HOM05D000051 ORTHO05D000015 5.7e-12 74.7 94 41.5
FAN16G1515 Fragaria x ananassa HOM05D015327 ORTHO05D019145 5.7e-12 74.7 91 44.0
RcHm_v2.0_Chr5g0028391 Rosa chinensis HOM05D000051 ORTHO05D000015 7.5e-12 74.3 106 42.5
MD11G1266800 Malus domestica HOM05D000051 ORTHO05D000015 9.8e-12 73.9 97 41.2
MD11G1266000 Malus domestica HOM05D000051 ORTHO05D000015 1.3e-11 73.6 105 44.8
MD11G1267000 Malus domestica HOM05D000051 ORTHO05D000015 1.3e-11 73.6 90 44.4
RcHm_v2.0_Chr4g0417361 Rosa chinensis HOM05D000051 ORTHO05D022692 2.8e-11 72.4 89 43.8
RcHm_v2.0_Chr5g0028431 Rosa chinensis HOM05D000051 ORTHO05D000015 4.8e-11 71.6 88 43.2
MD11G1266700 Malus domestica HOM05D000051 ORTHO05D000015 6.3e-11 71.2 88 44.3
MD03G1253700 Malus domestica HOM05D000051 ORTHO05D000015 1.1e-10 70.5 93 44.1
FvH4_3g21190 Fragaria vesca HOM05D000051 ORTHO05D000015 1.4e-10 70.1 88 42.0
FAN11G3894 Fragaria x ananassa HOM05D000051 ORTHO05D000015 1.4e-10 70.1 88 42.0
FAN28G0970 Fragaria x ananassa HOM05D000051 ORTHO05D000015 1.4e-10 70.1 90 43.3
FvH4_1g01500 Fragaria vesca HOM05D000051 ORTHO05D000015 1.8e-10 69.7 90 43.3
RcHm_v2.0_Chr5g0028471 Rosa chinensis HOM05D000051 ORTHO05D000015 1.8e-10 69.7 93 43.0
FvH4_3g33390 Fragaria vesca HOM05D000051 ORTHO05D000015 2.4e-10 69.3 97 45.4
MD03G1252900 Malus domestica HOM05D000051 ORTHO05D000015 3.1e-10 68.9 65 53.8
RcHm_v2.0_Chr4g0417391 Rosa chinensis HOM05D000051 ORTHO05D000015 3.1e-10 68.9 90 45.6
MD11G1266900 Malus domestica HOM05D000051 ORTHO05D000015 4.1e-10 68.6 89 43.8
RcHm_v2.0_Chr5g0060761 Rosa chinensis HOM05D000051 ORTHO05D000015 4.1e-10 68.6 101 41.6
FvH4_3g17100 Fragaria vesca HOM05D000051 ORTHO05D000015 5.4e-10 68.2 91 41.8
FvH4_3g18021 Fragaria vesca HOM05D000051 ORTHO05D000015 5.4e-10 68.2 93 43.0
FAN11G1423 Fragaria x ananassa HOM05D000051 ORTHO05D008292 5.4e-10 68.2 93 43.0
FAN11G3946 Fragaria x ananassa HOM05D000051 ORTHO05D000015 5.4e-10 68.2 91 41.8
RcHm_v2.0_Chr5g0059951 Rosa chinensis HOM05D000051 ORTHO05D000015 7.0e-10 67.8 103 40.8
MD11G1275600 Malus domestica HOM05D000051 ORTHO05D000015 9.1e-10 67.4 89 42.7
RcHm_v2.0_Chr5g0040081 Rosa chinensis HOM05D000051 ORTHO05D000015 9.1e-10 67.4 87 43.7
FvH4_2g40800 Fragaria vesca HOM05D000051 ORTHO05D000015 1.2e-09 67.0 90 43.3
FAN10G3451 Fragaria x ananassa HOM05D000051 ORTHO05D000015 1.2e-09 67.0 43 69.8
RcHm_v2.0_Chr5g0028401 Rosa chinensis HOM05D000051 ORTHO05D000015 1.2e-09 67.0 88 44.3
FvH4_1g01470 Fragaria vesca HOM05D000051 ORTHO05D000015 1.6e-09 66.6 88 42.0
FAN28G2620 Fragaria x ananassa HOM05D000051 ORTHO05D000015 1.6e-09 66.6 88 42.0
MD11G1274900 Malus domestica HOM05D000051 ORTHO05D000015 2.0e-09 66.2 76 51.3
MD03G1246000 Malus domestica HOM05D000051 ORTHO05D000015 2.7e-09 65.9 65 52.3
RcHm_v2.0_Chr5g0028481 Rosa chinensis HOM05D000051 ORTHO05D000015 2.7e-09 65.9 91 40.7
FvH4_3g33370 Fragaria vesca HOM05D000051 ORTHO05D000015 3.5e-09 65.5 102 46.1
RcHm_v2.0_Chr5g0028461 Rosa chinensis HOM05D000051 ORTHO05D000015 3.5e-09 65.5 104 38.5
FAN07G1332 Fragaria x ananassa HOM05D000051 ORTHO05D000015 4.5e-09 65.1 70 50.0
FvH4_3g17061 Fragaria vesca HOM05D000051 ORTHO05D000015 5.9e-09 64.7 89 42.7
RcHm_v2.0_Chr4g0417411 Rosa chinensis HOM05D000051 ORTHO05D000015 5.9e-09 64.7 89 39.3
FvH4_3g32940 Fragaria vesca HOM05D000051 ORTHO05D000015 7.7e-09 64.3 50 60.0
FvH4_3g33430 Fragaria vesca HOM05D000051 ORTHO05D000015 7.7e-09 64.3 98 49.0
FAN21G3599 Fragaria x ananassa HOM05D000051 ORTHO05D000015 7.7e-09 64.3 98 40.8
FAN22G0915 Fragaria x ananassa HOM05D000051 ORTHO05D022692 1.0e-08 63.9 99 40.4
FAN12G4103 Fragaria x ananassa HOM05D000051 ORTHO05D022692 1.7e-08 63.2 92 41.3
MD11G1256200 Malus domestica HOM05D000051 ORTHO05D000015 1.7e-08 63.2 97 37.1
RcHm_v2.0_Chr5g0059961 Rosa chinensis HOM05D000051 ORTHO05D000015 1.7e-08 63.2 102 41.2
FvH4_4g14850 Fragaria vesca HOM05D000051 ORTHO05D022692 2.9e-08 62.4 87 42.5
FvH4_3g17580 Fragaria vesca HOM05D000051 ORTHO05D000015 5.0e-08 61.6 76 44.7
FAN16G3202 Fragaria x ananassa HOM05D000051 ORTHO05D000015 5.0e-08 61.6 76 44.7
FAN28G0582 Fragaria x ananassa HOM05D012937 ORTHO05D000015 5.0e-08 61.6 64 51.6
RcHm_v2.0_Chr7g0237071 Rosa chinensis HOM05D000051 ORTHO05D000015 6.5e-08 61.2 97 43.3
FAN08G2405 Fragaria x ananassa HOM05D000051 ORTHO05D000015 8.5e-08 60.8 90 45.6
MD03G1253200 Malus domestica HOM05D000051 ORTHO05D000015 1.1e-07 60.5 65 49.2
FAN25G2060 Fragaria x ananassa HOM05D000051 ORTHO05D000015 2.5e-07 59.3 77 40.3
RcHm_v2.0_Chr5g0028411 Rosa chinensis HOM05D000051 ORTHO05D000015 2.5e-07 59.3 101 36.6
RcHm_v2.0_Chr5g0029291 Rosa chinensis HOM05D000051 ORTHO05D000015 3.2e-07 58.9 76 42.1
FvH4_3g18010 Fragaria vesca HOM05D000051 ORTHO05D000015 4.2e-07 58.5 57 50.9
FAN19G0896 Fragaria x ananassa HOM05D000051 ORTHO05D000015 4.2e-07 58.5 88 39.8
RcHm_v2.0_Chr5g0028261 Rosa chinensis HOM05D000051 ORTHO05D000015 4.2e-07 58.5 91 39.6
MD03G1253100 Malus domestica HOM05D000051 ORTHO05D000015 5.5e-07 58.2 91 38.5
FvH4_6g07500 Fragaria vesca HOM05D000051 ORTHO05D000015 7.2e-07 57.8 86 40.7
FAN14G2385 Fragaria x ananassa HOM05D000051 ORTHO05D000015 7.2e-07 57.8 86 40.7
FAN20G2836 Fragaria x ananassa HOM05D000051 ORTHO05D000015 9.4e-07 57.4 90 42.2
RcHm_v2.0_Chr1g0363171 Rosa chinensis HOM05D000051 ORTHO05D000015 1.6e-06 56.6 61 49.2
FAN05G4322 Fragaria x ananassa HOM05D000051 ORTHO05D000015 2.1e-06 56.2 86 39.5
FAN11G2886 Fragaria x ananassa HOM05D000051 ORTHO05D000015 2.1e-06 56.2 76 43.4
MD03G1253500 Malus domestica HOM05D000051 ORTHO05D000015 2.1e-06 56.2 70 40.0
Prupe.4G160900 Prunus persica HOM05D000051 ORTHO05D000015 2.1e-06 56.2 103 36.9
RcHm_v2.0_Chr5g0028521 Rosa chinensis HOM05D000051 ORTHO05D000015 2.1e-06 56.2 91 39.6
FAN09G0905 Fragaria x ananassa HOM05D007743 ORTHO05D000015 2.7e-06 55.8 65 46.2
Dinv38189 Davidia involucrata HOM05D000051 ORTHO05D000015 3.6e-06 55.5 124 33.1
FvH4_6g08520 Fragaria vesca HOM05D000051 ORTHO05D000015 3.6e-06 55.5 103 35.0
FAN14G4989 Fragaria x ananassa HOM05D000051 ORTHO05D209487 3.6e-06 55.5 138 32.6
MD11G1265300 Malus domestica HOM05D000051 ORTHO05D000015 3.6e-06 55.5 103 35.9
RcHm_v2.0_Chr5g0028201 Rosa chinensis HOM05D000051 ORTHO05D000015 4.7e-06 55.1 96 39.6
FAN25G2557 Fragaria x ananassa HOM05D000051 ORTHO05D000015 6.1e-06 54.7 76 40.8
FAN11G1258 Fragaria x ananassa HOM05D000051 ORTHO05D000015 8.0e-06 54.3 97 35.1


User provided reference genes

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