Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN27G1440 Fragaria x ananassa HOM05D007310 ORTHO05D002375 1.0e-120 436.8 231 100.0
FvH4_2g13500 Fragaria vesca HOM05D007310 ORTHO05D002375 1.0e-107 393.7 231 88.7
FAN24G3359 Fragaria x ananassa HOM05D007310 ORTHO05D004145 7.0e-101 370.9 219 90.0
FAN15G0442 Fragaria x ananassa HOM05D007310 ORTHO05D002375 2.8e-94 349.0 231 84.4
RcHm_v2.0_Chr7g0236611 Rosa chinensis HOM05D007310 ORTHO05D002375 4.7e-89 331.6 233 77.7
Prupe.8G066300 Prunus persica HOM05D007310 ORTHO05D002375 4.5e-31 139.0 221 41.6
Lalb_Chr09g0326871 Lupinus albus HOM05D007310 ORTHO05D002375 1.3e-30 137.5 166 47.6
Cfa005685 Carpinus fangiana HOM05D007310 ORTHO05D002375 5.6e-26 122.1 216 40.7
Dinv24166 Davidia involucrata HOM05D007310 ORTHO05D002375 8.1e-25 118.2 217 37.3
Ciclev10030152m.g Citrus clementina HOM05D007310 ORTHO05D002375 1.8e-24 117.1 136 50.7
Migut.B00577 Erythranthe guttata HOM05D007310 ORTHO05D002375 1.8e-24 117.1 180 43.3
GSVIVG01015685001 Vitis vinifera HOM05D007310 ORTHO05D002375 1.8e-24 117.1 170 40.6
Peaxi162Scf00299g00914 Petunia axillaris HOM05D007310 ORTHO05D002375 1.2e-23 114.4 180 38.9
Carub.0003s2834 Capsella rubella HOM05D007310 ORTHO05D002375 2.6e-23 113.2 154 39.0
Glyma.13G042400 Glycine max HOM05D007310 ORTHO05D002375 1.7e-22 110.5 161 42.2
SalBow8G1210 Salvia bowleyana HOM05D007310 ORTHO05D002375 1.7e-22 110.5 155 43.2
Solyc01g105600.3 Solanum lycopersicum HOM05D007310 ORTHO05D002375 4.9e-22 109.0 163 39.3
AT2G14095 Arabidopsis thaliana HOM05D007310 ORTHO05D002375 6.4e-22 108.6 147 40.1
Sopen01g048060 Solanum pennellii HOM05D007310 ORTHO05D002375 8.4e-22 108.2 160 41.2
VMungo0251G1327 Vigna mungo HOM05D007310 ORTHO05D002375 1.1e-21 107.8 135 48.9
Hma1.2p1_0784F.1_g217300 Hydrangea macrophylla HOM05D007310 ORTHO05D002375 1.4e-21 107.5 115 51.3
PGSC0003DMG400012536 Solanum tuberosum HOM05D007310 ORTHO05D002375 1.9e-21 107.1 168 38.7
Duzib248G0762 Durio zibethinus HOM05D007310 ORTHO05D002375 2.5e-21 106.7 164 44.5
MD05G1054900 Malus domestica HOM05D007310 ORTHO05D002375 2.5e-21 106.7 223 39.9
Potri.001G310100 Populus trichocarpa HOM05D007310 ORTHO05D002375 2.5e-21 106.7 215 35.8
CANSAT11G0123 Cannabis sativa HOM05D007310 ORTHO05D002375 3.2e-21 106.3 177 44.1
CAN.G523.36 Capsicum annuum HOM05D007310 ORTHO05D002375 3.2e-21 106.3 167 37.7
Oeu022081.1 Olea europaea HOM05D007310 ORTHO05D002375 4.2e-21 105.9 158 43.0
Cc02_g21140 Coffea canephora HOM05D007310 ORTHO05D002375 5.5e-21 105.5 136 39.7
Eucgr.I02631 Eucalyptus grandis HOM05D007310 ORTHO05D002375 5.5e-21 105.5 133 48.1
Nitab4.5_0006625g0010 Nicotiana tabacum HOM05D007310 ORTHO05D002375 5.5e-21 105.5 170 37.1
Rhsim05G0103200 Rhododendron simsii HOM05D007310 ORTHO05D002375 7.1e-21 105.1 220 37.7
Thecc.02G133200 Theobroma cacao HOM05D007310 ORTHO05D002375 1.2e-20 104.4 216 38.0
Nn5g29980 Nelumbo nucifera HOM05D007310 ORTHO05D002375 2.7e-20 103.2 152 42.1
CARHR104210 Cardamine hirsuta HOM05D007310 ORTHO05D002375 3.5e-20 102.8 154 37.0
AUR62011722 Chenopodium quinoa HOM05D007310 ORTHO05D002375 3.5e-20 102.8 120 46.7
TPR.G2868 Trifolium pratense HOM05D007310 ORTHO05D002375 3.5e-20 102.8 156 41.0
Haze_10565 Corylus avellana HOM05D007310 ORTHO05D002375 4.6e-20 102.4 217 38.2
PGR142G1548 Punica granatum HOM05D007310 ORTHO05D002375 4.6e-20 102.4 135 47.4
DCAR_021882 Daucus carota HOM05D007310 ORTHO05D002375 6.0e-20 102.1 122 46.7
CiPaw.05G032100 Carya illinoinensis HOM05D007310 ORTHO05D002375 1.3e-19 100.9 123 52.0
Manes.07G035800 Manihot esculenta HOM05D007310 ORTHO05D002375 1.3e-19 100.9 141 42.6
AUR62012905 Chenopodium quinoa HOM05D007310 ORTHO05D002375 2.3e-19 100.1 120 45.0
Lj4g0014623 Lotus japonicus HOM05D007310 ORTHO05D002375 3.0e-19 99.8 158 41.8
Manes.07G038100 Manihot esculenta HOM05D007310 ORTHO05D002375 3.0e-19 99.8 141 41.8
AL3G45790 Arabidopsis lyrata HOM05D007310 ORTHO05D002375 6.7e-19 98.6 155 34.8
arahy.Tifrunner.gnm1.ann1.KVX74B Arachis hypogaea HOM05D007310 ORTHO05D002375 6.7e-19 98.6 127 44.9
arahy.Tifrunner.gnm1.ann1.U7VQVC Arachis hypogaea HOM05D007310 ORTHO05D002375 6.7e-19 98.6 127 44.9
SGA_v2.0_scaffold14G07142 Striga asiatica HOM05D007310 ORTHO05D002375 8.7e-19 98.2 115 47.0
Nitab4.5_0000863g0020 Nicotiana tabacum HOM05D007310 ORTHO05D002375 1.1e-18 97.8 177 37.3
QL11p023211 Quercus lobata HOM05D007310 ORTHO05D002375 1.1e-18 97.8 210 35.2
Cpa.g.sc42.21 Carica papaya HOM05D007310 ORTHO05D002375 1.5e-18 97.4 144 45.1
CSS0047922 Camellia sinensis var. sinensis HOM05D007310 ORTHO05D002375 2.5e-18 96.7 138 41.3
EL10Ac9g21224 Beta vulgaris HOM05D007310 ORTHO05D002375 3.3e-18 96.3 119 42.9
Ca_18369_v3 Cicer arietinum L. HOM05D007310 ORTHO05D002375 5.6e-18 95.5 153 42.5
TWI14G0938 Tripterygium wilfordii HOM05D007310 ORTHO05D002375 9.6e-18 94.7 124 41.9
Sabra17G0036600 Salix brachista HOM05D007310 ORTHO05D002375 1.3e-17 94.4 91 59.3
HanXRQChr10g0290991 Helianthus annuus HOM05D007310 ORTHO05D002375 1.6e-17 94.0 210 33.8
CiPaw.06G156100 Carya illinoinensis HOM05D007310 ORTHO05D002375 2.1e-17 93.6 126 48.4
COL.COLO4_32323 Corchorus olitorius HOM05D007310 ORTHO05D002375 2.1e-17 93.6 219 33.8
Medtr4g093820 Medicago truncatula HOM05D007310 ORTHO05D002375 2.1e-17 93.6 190 33.7
PSO761G0222 Papaver somniferum HOM05D007310 ORTHO05D002375 4.0e-16 89.4 127 40.2
Sp3g27450 Schrenkiella parvula HOM05D007310 ORTHO05D002375 4.0e-16 89.4 119 40.3
Actinidia28038 Actinidia chinensis HOM05D007310 ORTHO05D002375 5.3e-16 89.0 202 35.1
Sabra17G0042000 Salix brachista HOM05D007310 ORTHO05D002375 5.3e-16 89.0 91 54.9
Thhalv10022863m.g Eutrema salsugineum HOM05D007310 ORTHO05D002375 6.9e-16 88.6 101 38.6
Psat7g100440 Pisum sativum HOM05D007310 ORTHO05D002375 1.5e-15 87.4 121 41.3
ECA234G2182 Erigeron canadensis HOM05D007310 ORTHO05D002375 1.3e-14 84.3 210 31.4
Phvul.002G211100 Phaseolus vulgaris HOM05D007310 ORTHO05D002375 1.3e-14 84.3 160 39.4
BcaB08g34551 Brassica carinata HOM05D007310 ORTHO05D002375 1.7e-14 84.0 158 32.9
MBI06_g03314_MAGBIO Magnolia biondii HOM05D007310 ORTHO05D002375 1.7e-14 84.0 139 40.3
Potri.017G050000 Populus trichocarpa HOM05D007310 ORTHO05D002375 1.7e-14 84.0 168 39.3
BcaC01g03103 Brassica carinata HOM05D007310 ORTHO05D002375 2.9e-14 83.2 124 33.9
THA.LOC104804411 Tarenaya hassleriana HOM05D007310 ORTHO05D002375 1.9e-13 80.5 167 37.7
Aa31LG8G12500 Aethionema arabicum HOM05D007310 ORTHO05D002375 2.5e-13 80.1 89 40.4
Sabra16G0196000 Salix brachista HOM05D007310 ORTHO05D002375 2.5e-13 80.1 146 38.4
C03p56020 Brassica napus HOM05D007310 ORTHO05D002375 9.3e-13 78.2 125 34.4
BolC3t17888H Brassica oleracea HOM05D007310 ORTHO05D002375 9.3e-13 78.2 125 34.4
Glyma.08G070200 Glycine max HOM05D007310 ORTHO05D002375 9.3e-13 78.2 183 35.0
HPP92_019302 Vanilla planifolia HOM05D007310 ORTHO05D002375 1.6e-12 77.4 117 37.6
Duzib132G0922 Durio zibethinus HOM05D007310 ORTHO05D002375 3.5e-12 76.3 110 42.7
Gohir.D02G199400 Gossypium hirsutum HOM05D007310 ORTHO05D002375 2.3e-11 73.6 119 38.7
Sc08g0003780 Simmondsia chinensis HOM05D007310 ORTHO05D002375 3.0e-11 73.2 170 34.1
BraA03t13650Z Brassica rapa HOM05D007310 ORTHO05D002375 3.9e-11 72.8 124 30.6
Atru.chr6.1218 Acer truncatum HOM05D007310 ORTHO05D002375 5.1e-11 72.4 87 52.9
A03p45150 Brassica napus HOM05D007310 ORTHO05D002375 3.3e-10 69.7 124 29.8
TAR376G0136 Trochodendron aralioides HOM05D007310 ORTHO05D002375 3.3e-10 69.7 138 39.9
PSO700G0139 Papaver somniferum HOM05D007310 ORTHO05D002375 7.4e-10 68.6 127 34.6
ClCG09G015950 Citrullus lanatus HOM05D007310 ORTHO05D002375 1.3e-09 67.8 158 35.4
CSS0048944 Camellia sinensis var. sinensis HOM05D007310 ORTHO05D002375 6.3e-09 65.5 60 53.3
MELO3C018616.2 Cucumis melo HOM05D007310 ORTHO05D002375 2.4e-08 63.5 170 32.9
Atru.chr13.1111 Acer truncatum HOM05D004728 ORTHO05D002375 3.1e-08 63.2 122 33.6
Gorai.005G224000 Gossypium raimondii HOM05D007310 ORTHO05D002375 6.9e-08 62.0 198 30.8
Sed0021578 Sechium edule HOM05D007310 ORTHO05D002375 6.9e-08 62.0 106 38.7
CsaV3_7G006790 Cucumis sativus L. HOM05D007310 ORTHO05D002375 9.0e-08 61.6 127 36.2
CSS0024408 Camellia sinensis var. sinensis HOM05D007310 ORTHO05D002375 1.2e-07 61.2 100 43.0
Nn1g05467 Nelumbo nucifera HOM05D004728 ORTHO05D002375 1.2e-07 61.2 119 33.6
FAN23G2235 Fragaria x ananassa HOM05D004728 ORTHO05D002375 3.4e-07 59.7 132 31.1
Lsat_1_v5_gn_1_2840 Lactuca sativa HOM05D004728 ORTHO05D002375 4.5e-07 59.3 113 32.7
Oeu045990.1 Olea europaea HOM05D004728 ORTHO05D002375 4.5e-07 59.3 123 31.7
FAN26G1362 Fragaria x ananassa HOM05D004728 ORTHO05D002375 5.9e-07 58.9 132 30.3
PSO761G0559 Papaver somniferum HOM05D015253 ORTHO05D002375 5.9e-07 58.9 107 32.7
RcHm_v2.0_Chr2g0112261 Rosa chinensis HOM05D004728 ORTHO05D002375 5.9e-07 58.9 114 36.0
Duzib147G1195 Durio zibethinus HOM05D004728 ORTHO05D002375 7.7e-07 58.5 166 31.9
FAN19G1066 Fragaria x ananassa HOM05D004728 ORTHO05D002375 7.7e-07 58.5 178 29.8
HanXRQChr17g0556311 Helianthus annuus HOM05D004728 ORTHO05D002375 7.7e-07 58.5 117 32.5
MD15G1317700 Malus domestica HOM05D004728 ORTHO05D002375 7.7e-07 58.5 141 29.8
MD15G1377600 Malus domestica HOM05D004728 ORTHO05D002375 1.0e-06 58.2 148 31.1
Lsat_1_v5_gn_5_108861 Lactuca sativa HOM05D007310 ORTHO05D002375 1.7e-06 57.4 65 46.2
Os08g0483600 Oryza sativa ssp. japonica HOM05D026744 ORTHO05D012887 2.2e-06 57.0 136 30.1
Cfa017900 Carpinus fangiana HOM05D004728 ORTHO05D002375 3.8e-06 56.2 119 33.6
Zm00001eb027840 Zea mays HOM05D007310 ORTHO05D002375 3.8e-06 56.2 96 35.4
MSTRG.1388 Avicennia marina HOM05D004728 ORTHO05D002375 5.0e-06 55.8 147 29.9
Lsat_1_v5_gn_9_73441 Lactuca sativa HOM05D004728 ORTHO05D002375 5.0e-06 55.8 140 27.1
PGR042G1769 Punica granatum HOM05D004728 ORTHO05D002375 5.0e-06 55.8 120 31.7
Sabra02G0079700 Salix brachista HOM05D004728 ORTHO05D002375 5.0e-06 55.8 152 31.6


User provided reference genes

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