Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN27G1409 Fragaria x ananassa HOM05D007253 ORTHO05D009055 1.7e-71 272.7 155 100.0
FvH4_2g41340 Fragaria vesca HOM05D007253 ORTHO05D009055 3.6e-69 265.0 155 98.1
FAN15G3156 Fragaria x ananassa HOM05D007253 ORTHO05D009055 4.4e-67 258.1 155 95.5
RcHm_v2.0_Chr6g0299201 Rosa chinensis HOM05D007253 ORTHO05D009055 9.5e-62 240.4 152 91.4
Prupe.1G396700 Prunus persica HOM05D007253 ORTHO05D009055 1.3e-47 193.4 152 76.3
MD15G1043300 Malus domestica HOM05D007253 ORTHO05D009055 2.3e-47 192.6 152 77.0
MD08G1052200 Malus domestica HOM05D007253 ORTHO05D009055 2.5e-46 189.1 119 77.3
TWI63G1073 Tripterygium wilfordii HOM05D007253 ORTHO05D009055 3.5e-40 168.7 153 68.6
CiPaw.07G233200 Carya illinoinensis HOM05D007253 ORTHO05D009055 1.1e-38 163.7 154 68.8
COL.COLO4_18974 Corchorus olitorius HOM05D007253 ORTHO05D009055 1.5e-38 163.3 153 69.3
MELO3C016946.2 Cucumis melo HOM05D007253 ORTHO05D009055 3.3e-38 162.2 157 64.3
CSS0046604 Camellia sinensis var. sinensis HOM05D007253 ORTHO05D009055 4.3e-38 161.8 153 66.7
CSS0050010 Camellia sinensis var. sinensis HOM05D007253 ORTHO05D009055 4.3e-38 161.8 153 66.7
Ciclev10009764m.g Citrus clementina HOM05D007253 ORTHO05D009055 9.6e-38 160.6 150 69.3
Dinv03404 Davidia involucrata HOM05D007253 ORTHO05D009055 2.1e-37 159.5 152 65.1
Atru.chr7.2576 Acer truncatum HOM05D007253 ORTHO05D009055 6.2e-37 157.9 157 65.0
CSS0026470 Camellia sinensis var. sinensis HOM05D007253 ORTHO05D009055 6.2e-37 157.9 117 77.8
CSS0024958 Camellia sinensis var. sinensis HOM05D007253 ORTHO05D009055 8.1e-37 157.5 116 77.6
Thecc.09G013200 Theobroma cacao HOM05D007253 ORTHO05D009055 8.1e-37 157.5 153 69.3
Duzib168G0559 Durio zibethinus HOM05D007253 ORTHO05D009055 1.4e-36 156.8 123 77.2
Duzib187G0122 Durio zibethinus HOM05D007253 ORTHO05D009055 4.0e-36 155.2 151 62.9
TAR626G1108 Trochodendron aralioides HOM05D007253 ORTHO05D009055 5.3e-36 154.8 131 71.0
Cpa.g.sc148.44 Carica papaya HOM05D007253 ORTHO05D009055 1.5e-35 153.3 150 64.7
Gohir.D05G063600 Gossypium hirsutum HOM05D007253 ORTHO05D009055 2.6e-35 152.5 150 65.3
Eucgr.C04033 Eucalyptus grandis HOM05D007253 ORTHO05D009055 4.5e-35 151.8 147 68.0
Nn8g40104 Nelumbo nucifera HOM05D007253 ORTHO05D009055 7.6e-35 151.0 123 74.0
Cc08_g07700 Coffea canephora HOM05D007253 ORTHO05D009055 9.9e-35 150.6 130 70.8
Gorai.009G064300 Gossypium raimondii HOM05D007253 ORTHO05D009055 1.7e-34 149.8 150 65.3
Manes.03G007000 Manihot esculenta HOM05D007253 ORTHO05D009055 1.7e-34 149.8 147 66.7
BcaB06g28020 Brassica carinata HOM05D007253 ORTHO05D009055 4.9e-34 148.3 147 65.3
ClCG05G016120 Citrullus lanatus HOM05D007253 ORTHO05D009055 6.4e-34 147.9 159 60.4
GSVIVG01035999001 Vitis vinifera HOM05D007253 ORTHO05D009055 6.4e-34 147.9 109 78.9
CANSAT35G1478 Cannabis sativa HOM05D007253 ORTHO05D009055 8.4e-34 147.5 158 62.0
SalBow8G5515 Salvia bowleyana HOM05D007253 ORTHO05D009055 8.4e-34 147.5 137 67.2
BcaC02g08395 Brassica carinata HOM05D007253 ORTHO05D009055 1.4e-33 146.7 147 65.3
C04p54740 Brassica napus HOM05D007253 ORTHO05D009055 1.4e-33 146.7 147 65.3
A04p19250 Brassica napus HOM05D007253 ORTHO05D009055 1.9e-33 146.4 147 65.3
BolC4t27019H Brassica oleracea HOM05D007253 ORTHO05D009055 1.9e-33 146.4 147 65.3
BraA04t17525Z Brassica rapa HOM05D007253 ORTHO05D009055 1.9e-33 146.4 147 65.3
Sc09g0010780 Simmondsia chinensis HOM05D007253 ORTHO05D009055 2.4e-33 146.0 148 62.2
Sed0002011 Sechium edule HOM05D007253 ORTHO05D009055 5.4e-33 144.8 122 70.5
ATR0580G321 Amborella trichopoda HOM05D007253 ORTHO05D009055 1.2e-32 143.7 104 81.7
Thhalv10000367m.g Eutrema salsugineum HOM05D007253 ORTHO05D009055 2.1e-32 142.9 148 64.2
Nitab4.5_0000264g0020 Nicotiana tabacum HOM05D007253 ORTHO05D009055 2.7e-32 142.5 104 79.8
PGR044G0212 Punica granatum HOM05D007253 ORTHO05D009055 2.7e-32 142.5 158 61.4
Actinidia14140 Actinidia chinensis HOM05D007253 ORTHO05D009055 4.6e-32 141.7 155 62.6
Aa31LG7G11560 Aethionema arabicum HOM05D007253 ORTHO05D009055 6.0e-32 141.4 149 63.1
Carub.0004s0449 Capsella rubella HOM05D007253 ORTHO05D009055 6.0e-32 141.4 152 61.2
CAN.G285.13 Capsicum annuum HOM05D007253 ORTHO05D009055 6.0e-32 141.4 117 70.1
HanXRQChr13g0413301 Helianthus annuus HOM05D007253 ORTHO05D009055 6.0e-32 141.4 113 73.5
Oeu023241.1 Olea europaea HOM05D007253 ORTHO05D009055 6.0e-32 141.4 149 63.1
Potri.006G266800 Populus trichocarpa HOM05D007253 ORTHO05D009055 6.0e-32 141.4 128 71.1
CARHR116800 Cardamine hirsuta HOM05D007253 ORTHO05D009055 7.9e-32 141.0 148 64.9
Nitab4.5_0005450g0020 Nicotiana tabacum HOM05D007253 ORTHO05D009055 7.9e-32 141.0 104 76.9
SGA_v2.0_scaffold4G02163 Striga asiatica HOM05D007253 ORTHO05D009055 1.0e-31 140.6 129 69.0
PSO063G6023 Papaver somniferum HOM05D007253 ORTHO05D009055 1.3e-31 140.2 115 73.0
Sp4g03910 Schrenkiella parvula HOM05D007253 ORTHO05D009055 1.8e-31 139.8 147 62.6
MSTRG.13960 Avicennia marina HOM05D007253 ORTHO05D009055 5.1e-31 138.3 127 68.5
Lsat_1_v5_gn_6_77860 Lactuca sativa HOM05D007253 ORTHO05D009055 8.7e-31 137.5 111 75.7
PSO782G0429 Papaver somniferum HOM05D007253 ORTHO05D009055 1.1e-30 137.1 115 72.2
AT2G24860 Arabidopsis thaliana HOM05D007253 ORTHO05D009055 1.5e-30 136.7 152 61.2
DCAR_000661 Daucus carota HOM05D007253 ORTHO05D009055 2.5e-30 136.0 128 68.8
Migut.E01444 Erythranthe guttata HOM05D007253 ORTHO05D009055 3.3e-30 135.6 108 78.7
Hund25608 Selenicereus undatus HOM05D007253 ORTHO05D009055 3.3e-30 135.6 132 61.4
TPR.G1881 Trifolium pratense HOM05D007253 ORTHO05D009055 3.3e-30 135.6 147 61.2
Aqoxy7G03301 Aquilegia oxysepala HOM05D007253 ORTHO05D009055 5.6e-30 134.8 104 58.7
AL4G15950 Arabidopsis lyrata HOM05D007253 ORTHO05D009055 5.6e-30 134.8 148 60.8
EL10Ac2g02465 Beta vulgaris HOM05D007253 ORTHO05D009055 7.4e-30 134.4 149 57.0
Potri.018G016400 Populus trichocarpa HOM05D007253 ORTHO05D009055 7.4e-30 134.4 139 63.3
HPP92_010354 Vanilla planifolia HOM05D007253 ORTHO05D009055 7.4e-30 134.4 99 79.8
Solyc08g006620.3 Solanum lycopersicum HOM05D007253 ORTHO05D009055 9.6e-30 134.0 117 70.1
Sopen08g002570 Solanum pennellii HOM05D007253 ORTHO05D009055 9.6e-30 134.0 117 70.1
THA.LOC104803610 Tarenaya hassleriana HOM05D007253 ORTHO05D009055 9.6e-30 134.0 106 76.4
ECA240G1715 Erigeron canadensis HOM05D001941 ORTHO05D002198 1.3e-29 133.7 116 71.6
arahy.Tifrunner.gnm1.ann1.G7TND8 Arachis hypogaea HOM05D007253 ORTHO05D009055 2.1e-29 132.9 127 66.9
CDE05G3047 Ceratophyllum demersum HOM05D007253 ORTHO05D009055 2.8e-29 132.5 106 76.4
Lj1g0002882 Lotus japonicus HOM05D007253 ORTHO05D009055 4.8e-29 131.7 139 61.2
MBI14_g31385_MAGBIO Magnolia biondii HOM05D007253 ORTHO05D009055 6.2e-29 131.3 150 59.3
Psat5g033080 Pisum sativum HOM05D007253 ORTHO05D009055 1.1e-28 130.6 128 67.2
arahy.Tifrunner.gnm1.ann1.2K72KI Arachis hypogaea HOM05D007253 ORTHO05D009055 1.4e-28 130.2 127 66.1
arahy.Tifrunner.gnm1.ann1.LF5WZD Arachis hypogaea HOM05D007253 ORTHO05D009055 1.8e-28 129.8 103 77.7
Medtr3g105830 Medicago truncatula HOM05D007253 ORTHO05D009055 1.8e-28 129.8 101 78.2
Phvul.009G086100 Phaseolus vulgaris HOM05D007253 ORTHO05D009055 1.8e-28 129.8 126 68.3
Glyma.17G221800 Glycine max HOM05D007253 ORTHO05D009055 3.1e-28 129.0 143 60.8
Glyma.04G059900 Glycine max HOM05D007253 ORTHO05D009055 4.0e-28 128.6 120 62.5
Glyma.06G060300 Glycine max HOM05D007253 ORTHO05D009055 9.0e-28 127.5 107 71.0
vmacro05116 Vaccinium macrocarpon HOM05D007253 ORTHO05D009055 1.5e-27 126.7 151 59.6
Glyma.14G104200 Glycine max HOM05D007253 ORTHO05D009055 2.6e-27 125.9 145 62.1
Os09g0423700 Oryza sativa ssp. japonica HOM05D007253 ORTHO05D009055 5.8e-27 124.8 128 62.5
unitig_32.g11120 Utricularia gibba HOM05D007253 ORTHO05D009055 1.7e-26 123.2 98 77.6
Ah.00g238170 Amaranthus hybridus HOM05D007253 ORTHO05D009055 2.2e-26 122.9 103 68.9
Ah.12g060580 Amaranthus hybridus HOM05D007253 ORTHO05D009055 2.2e-26 122.9 103 68.9
Lalb_Chr23g0268151 Lupinus albus HOM05D007253 ORTHO05D009055 2.9e-26 122.5 151 55.6
CDE02G4354 Ceratophyllum demersum HOM05D007253 ORTHO05D009055 1.6e-24 116.7 93 77.4
Zm00001eb313320 Zea mays HOM05D007253 ORTHO05D009055 1.6e-24 116.7 85 58.8
SEGI_37228 Sequoiadendron giganteum HOM05D007253 ORTHO05D009055 2.1e-24 116.3 88 78.4
TAR383G0216 Trochodendron aralioides HOM05D007253 ORTHO05D009055 1.1e-22 110.5 80 80.0
AagrBONN_evm.TU.Sc2ySwM_117.2542 Anthoceros agrestis HOM05D007253 ORTHO05D009055 5.7e-22 108.2 85 77.6
Peaxi162Scf00045g01937 Petunia axillaris HOM05D007253 ORTHO05D009055 7.4e-22 107.8 75 84.0
Pp3c6_11160 Physcomitrium patens HOM05D007253 ORTHO05D009055 7.4e-22 107.8 91 70.3
Mapoly0121s0030 Marchantia polymorpha HOM05D007253 ORTHO05D009055 4.8e-21 105.1 126 56.3
AUR62032436 Chenopodium quinoa HOM05D007253 ORTHO05D009055 1.8e-20 103.2 75 80.0
SMO196G0205 Selaginella moellendorffii HOM05D007253 ORTHO05D009055 9.0e-20 100.9 83 72.3
PGSC0003DMG400026305 Solanum tuberosum HOM05D005612 ORTHO05D007014 2.0e-19 99.8 75 74.7
Gohir.A05G061100 Gossypium hirsutum HOM05D007253 ORTHO05D009055 1.1e-12 77.4 88 52.3
Haze_21370 Corylus avellana HOM05D007253 ORTHO05D009055 9.4e-09 64.3 88 47.7
Cfa013009 Carpinus fangiana HOM05D018710 ORTHO05D009055 1.6e-08 63.5 100 44.0
QL02p017999 Quercus lobata HOM05D007253 ORTHO05D009055 4.6e-08 62.0 82 51.2
CsaV3_4G036390 Cucumis sativus L. HOM05D018710 ORTHO05D009055 2.5e-06 56.2 87 43.7


User provided reference genes

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