Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN27G1347 Fragaria x ananassa HOM05D003537 ORTHO05D004180 4.7e-75 284.6 165 100.0
FvH4_2g29200 Fragaria vesca HOM05D003537 ORTHO05D004180 5.8e-57 224.6 148 92.6
FAN15G0527 Fragaria x ananassa HOM05D003537 ORTHO05D004180 1.4e-55 219.9 132 100.0
FAN24G0346 Fragaria x ananassa HOM05D003537 ORTHO05D004180 4.4e-49 198.4 119 90.8
RcHm_v2.0_Chr6g0298061 Rosa chinensis HOM05D003537 ORTHO05D004180 3.0e-45 185.7 132 86.4
Prupe.1G480000 Prunus persica HOM05D003537 ORTHO05D004180 1.1e-36 157.1 132 75.0
MD15G1124500 Malus domestica HOM05D003537 ORTHO05D004180 6.0e-30 134.8 103 64.1
QL02p021910 Quercus lobata HOM05D003537 ORTHO05D004180 6.2e-27 124.8 130 52.3
CiPaw.08G011800 Carya illinoinensis HOM05D003537 ORTHO05D004180 1.2e-25 120.6 130 65.4
Haze_21529 Corylus avellana HOM05D003537 ORTHO05D004180 3.4e-25 119.0 130 55.4
VMungo1309G0037 Vigna mungo HOM05D003537 ORTHO05D004180 3.9e-21 105.5 117 53.0
Dinv18245 Davidia involucrata HOM05D003537 ORTHO05D004180 6.7e-21 104.8 130 60.0
Actinidia40471 Actinidia chinensis HOM05D003537 ORTHO05D004180 1.9e-20 103.2 131 44.3
Sabra18G0030700 Salix brachista HOM05D003537 ORTHO05D004180 1.9e-20 103.2 115 58.3
Ciclev10009875m.g Citrus clementina HOM05D003537 ORTHO05D004180 3.3e-20 102.4 131 56.5
RcHm_v2.0_Chr2g0088401 Rosa chinensis HOM05D003537 ORTHO05D004180 3.3e-20 102.4 128 57.0
THA.LOC104808988 Tarenaya hassleriana HOM05D003537 ORTHO05D004180 3.3e-20 102.4 131 52.7
arahy.Tifrunner.gnm1.ann1.DMU7Q7 Arachis hypogaea HOM05D003537 ORTHO05D004180 7.4e-20 101.3 130 43.8
Lalb_Chr08g0244061 Lupinus albus HOM05D003537 ORTHO05D004180 9.6e-20 100.9 135 60.0
Gorai.010G114400 Gossypium raimondii HOM05D003537 ORTHO05D004180 1.3e-19 100.5 133 51.9
Nn8g39452 Nelumbo nucifera HOM05D003537 ORTHO05D004180 1.3e-19 100.5 130 56.2
arahy.Tifrunner.gnm1.ann1.9FI3T7 Arachis hypogaea HOM05D003537 ORTHO05D004180 1.6e-19 100.1 130 43.1
Dinv41510 Davidia involucrata HOM05D003537 ORTHO05D004180 2.8e-19 99.4 130 58.5
CANSAT25G1571 Cannabis sativa HOM05D003537 ORTHO05D004180 4.8e-19 98.6 137 45.3
Glyma.04G067500 Glycine max HOM05D003537 ORTHO05D004180 4.8e-19 98.6 124 60.5
Cpa.g.sc75.27 Carica papaya HOM05D003537 ORTHO05D004180 6.2e-19 98.2 130 48.5
QL10p023445 Quercus lobata HOM05D003537 ORTHO05D004180 6.2e-19 98.2 130 42.3
Actinidia21987 Actinidia chinensis HOM05D003537 ORTHO05D004180 8.1e-19 97.8 132 42.4
FAN23G0028 Fragaria x ananassa HOM05D003537 ORTHO05D004180 8.1e-19 97.8 127 49.6
Potri.018G028500 Populus trichocarpa HOM05D003537 ORTHO05D004180 8.1e-19 97.8 101 59.4
TPR.G3106 Trifolium pratense HOM05D003537 ORTHO05D004180 8.1e-19 97.8 105 58.1
Eucgr.C02783 Eucalyptus grandis HOM05D003537 ORTHO05D004180 1.4e-18 97.1 82 62.2
Gohir.A06G098204 Gossypium hirsutum HOM05D003537 ORTHO05D004180 1.4e-18 97.1 132 50.8
TAR636G0369 Trochodendron aralioides HOM05D003537 ORTHO05D004180 1.4e-18 97.1 130 50.8
COL.COLO4_18845 Corchorus olitorius HOM05D003537 ORTHO05D004180 2.4e-18 96.3 104 48.1
CiPaw.04G171200 Carya illinoinensis HOM05D003537 ORTHO05D004180 3.1e-18 95.9 135 42.2
Sed0005083 Sechium edule HOM05D003537 ORTHO05D004180 3.1e-18 95.9 137 46.0
Cfa003377 Carpinus fangiana HOM05D003537 ORTHO05D004180 5.3e-18 95.1 130 56.9
TAR625G0117 Trochodendron aralioides HOM05D003537 ORTHO05D004180 5.3e-18 95.1 130 56.2
FAN28G2448 Fragaria x ananassa HOM05D003537 ORTHO05D004180 9.0e-18 94.4 127 57.5
Glyma.06G069100 Glycine max HOM05D003537 ORTHO05D004180 9.0e-18 94.4 119 60.5
Nn2g12030 Nelumbo nucifera HOM05D003537 ORTHO05D004180 9.0e-18 94.4 132 48.5
Prupe.7G243100 Prunus persica HOM05D003537 ORTHO05D004180 9.0e-18 94.4 131 57.3
PGR044G0105 Punica granatum HOM05D003537 ORTHO05D004180 9.0e-18 94.4 123 57.7
Haze_25576 Corylus avellana HOM05D003537 ORTHO05D004180 1.2e-17 94.0 130 46.2
FvH4_1g03260 Fragaria vesca HOM05D003537 ORTHO05D004180 1.2e-17 94.0 127 57.5
FAN19G1671 Fragaria x ananassa HOM05D003537 ORTHO05D004180 1.2e-17 94.0 127 57.5
Manes.06G058601 Manihot esculenta HOM05D003537 ORTHO05D004180 1.2e-17 94.0 130 43.8
Duzib150G0412 Durio zibethinus HOM05D003537 ORTHO05D004180 2.6e-17 92.8 130 40.0
Atru.chr7.1160 Acer truncatum HOM05D003537 ORTHO05D004180 3.4e-17 92.4 130 50.8
CSS0014531 Camellia sinensis var. sinensis HOM05D003537 ORTHO05D004180 3.4e-17 92.4 86 60.5
Cc08_g00790 Coffea canephora HOM05D003537 ORTHO05D004180 3.4e-17 92.4 156 42.3
Medtr3g107397 Medicago truncatula HOM05D003537 ORTHO05D004180 3.4e-17 92.4 137 46.7
Lj1g0012711 Lotus japonicus HOM05D003537 ORTHO05D004180 4.5e-17 92.0 107 51.4
Thecc.09G026400 Theobroma cacao HOM05D003537 ORTHO05D004180 4.5e-17 92.0 92 70.7
Cpa.g.sc259.5 Carica papaya HOM05D003537 ORTHO05D004180 5.8e-17 91.7 134 58.2
Ciclev10009876m.g Citrus clementina HOM05D003537 ORTHO05D004180 5.8e-17 91.7 131 43.5
Dinv15950 Davidia involucrata HOM05D003537 ORTHO05D004180 5.8e-17 91.7 130 55.4
CsaV3_3G046470 Cucumis sativus L. HOM05D003537 ORTHO05D004180 7.6e-17 91.3 131 45.0
Gohir.D06G054550 Gossypium hirsutum HOM05D003537 ORTHO05D004180 9.9e-17 90.9 130 40.8
PGR142G2689 Punica granatum HOM05D003537 ORTHO05D004180 9.9e-17 90.9 130 39.2
ECA240G1743 Erigeron canadensis HOM05D003537 ORTHO05D004180 1.3e-16 90.5 134 45.5
Gohir.A06G055900 Gossypium hirsutum HOM05D003537 ORTHO05D004180 1.3e-16 90.5 130 40.0
Rhsim01G0071100 Rhododendron simsii HOM05D003537 ORTHO05D004180 1.3e-16 90.5 132 50.0
CsaV3_2G002870 Cucumis sativus L. HOM05D003537 ORTHO05D004180 1.7e-16 90.1 137 41.6
ClCG05G016980 Citrullus lanatus HOM05D003537 ORTHO05D004180 2.2e-16 89.7 131 51.1
Glyma.06G222000 Glycine max HOM05D003537 ORTHO05D004180 2.2e-16 89.7 132 56.8
Manes.16G121200 Manihot esculenta HOM05D003537 ORTHO05D004180 2.2e-16 89.7 102 60.8
ClCG11G003050 Citrullus lanatus HOM05D003537 ORTHO05D004180 2.9e-16 89.4 137 48.9
Glyma.13G167200 Glycine max HOM05D003537 ORTHO05D004180 3.8e-16 89.0 130 40.8
Gorai.010G063900 Gossypium raimondii HOM05D003537 ORTHO05D004180 3.8e-16 89.0 130 41.5
Manes.14G132200 Manihot esculenta HOM05D003537 ORTHO05D004180 3.8e-16 89.0 122 48.4
Phvul.003G164500 Phaseolus vulgaris HOM05D003537 ORTHO05D004180 3.8e-16 89.0 132 55.3
arahy.Tifrunner.gnm1.ann1.P86YY0 Arachis hypogaea HOM05D003537 ORTHO05D004180 4.9e-16 88.6 132 45.5
GSVIVG01015532001 Vitis vinifera HOM05D003537 ORTHO05D004180 4.9e-16 88.6 131 43.5
Ca_21681_v3 Cicer arietinum L. HOM05D003537 ORTHO05D004180 6.4e-16 88.2 131 42.7
Cc06_g08500 Coffea canephora HOM05D003537 ORTHO05D004180 6.4e-16 88.2 131 39.7
Glyma.17G114800 Glycine max HOM05D003537 ORTHO05D004180 6.4e-16 88.2 132 40.2
Peaxi162Scf00157g01525 Petunia axillaris HOM05D003537 ORTHO05D004180 8.4e-16 87.8 129 47.3
arahy.Tifrunner.gnm1.ann1.F0XIJD Arachis hypogaea HOM05D003537 ORTHO05D004180 1.1e-15 87.4 132 44.7
TWI63G0509 Tripterygium wilfordii HOM05D003537 ORTHO05D004180 1.1e-15 87.4 130 48.5
MD15G1173100 Malus domestica HOM05D003537 ORTHO05D004180 1.9e-15 86.7 130 55.4
Glyma.04G147800 Glycine max HOM05D003537 ORTHO05D004180 2.4e-15 86.3 128 49.2
Nitab4.5_0010481g0030 Nicotiana tabacum HOM05D003537 ORTHO05D004180 2.4e-15 86.3 132 43.2
VMungo1215G2386 Vigna mungo HOM05D003537 ORTHO05D004180 2.4e-15 86.3 131 51.9
Nitab4.5_0002658g0060 Nicotiana tabacum HOM05D003537 ORTHO05D004180 3.2e-15 85.9 153 37.3
Sed0007274 Sechium edule HOM05D003537 ORTHO05D004180 3.2e-15 85.9 104 48.1
TWI34G1168 Tripterygium wilfordii HOM05D003537 ORTHO05D004180 3.2e-15 85.9 130 47.7
Thecc.09G126600 Theobroma cacao HOM05D003537 ORTHO05D004180 4.2e-15 85.5 130 37.7
EL10Ac8g18657 Beta vulgaris HOM05D003537 ORTHO05D004180 7.1e-15 84.7 131 42.7
FAN20G1584 Fragaria x ananassa HOM05D003537 ORTHO05D004180 7.1e-15 84.7 40 100.0
Eucgr.C01175 Eucalyptus grandis HOM05D003537 ORTHO05D004180 1.2e-14 84.0 101 42.6
Gohir.A13G199600 Gossypium hirsutum HOM05D003537 ORTHO05D004180 1.6e-14 83.6 130 37.7
Lsat_1_v5_gn_7_45281 Lactuca sativa HOM05D003537 ORTHO05D004180 1.6e-14 83.6 133 45.1
Gohir.D13G205100 Gossypium hirsutum HOM05D003537 ORTHO05D004180 2.7e-14 82.8 130 36.2
Gorai.013G234000 Gossypium raimondii HOM05D003537 ORTHO05D004180 2.7e-14 82.8 130 36.2
MD02G1031600 Malus domestica HOM05D003537 ORTHO05D004180 3.5e-14 82.4 131 45.0
Medtr4g114180 Medicago truncatula HOM05D003537 ORTHO05D004180 3.5e-14 82.4 132 39.4
Psat4g040120 Pisum sativum HOM05D003537 ORTHO05D004180 6.0e-14 81.6 135 47.4
Os06g0332800 Oryza sativa ssp. japonica HOM05D003537 ORTHO05D004180 7.9e-14 81.3 92 69.6
CANSAT11G2285 Cannabis sativa HOM05D003537 ORTHO05D004180 1.0e-13 80.9 121 44.6
MBI01_g36269_MAGBIO Magnolia biondii HOM05D003537 ORTHO05D004180 1.0e-13 80.9 132 54.5
RhsimUnG0194700 Rhododendron simsii HOM05D003537 ORTHO05D004180 1.0e-13 80.9 104 53.8
Atru.BG.3.p Acer truncatum HOM05D003537 ORTHO05D004180 1.3e-13 80.5 67 58.2
DCAR_003091 Daucus carota HOM05D003537 ORTHO05D004180 1.3e-13 80.5 75 61.3
Oeu007500.1 Olea europaea HOM05D003537 ORTHO05D004180 1.8e-13 80.1 130 54.6
PSO455G0045 Papaver somniferum HOM05D003537 ORTHO05D004180 1.8e-13 80.1 133 46.6
HanXRQChr16g0505371 Helianthus annuus HOM05D003537 ORTHO05D004180 2.3e-13 79.7 132 37.9
Psat0s2233g0360 Pisum sativum HOM05D003537 ORTHO05D004180 2.3e-13 79.7 142 40.8
vmacro20557 Vaccinium macrocarpon HOM05D003537 ORTHO05D004180 2.3e-13 79.7 132 49.2
GSVIVG01035845001 Vitis vinifera HOM05D003537 ORTHO05D004180 3.0e-13 79.3 127 54.3
arahy.Tifrunner.gnm1.ann1.4IXQ36 Arachis hypogaea HOM05D003537 ORTHO05D004180 3.9e-13 79.0 104 48.1
arahy.Tifrunner.gnm1.ann1.EPB35R Arachis hypogaea HOM05D003537 ORTHO05D004180 3.9e-13 79.0 104 48.1
PGSC0003DMG400002918 Solanum tuberosum HOM05D005825 ORTHO05D006483 3.9e-13 79.0 82 65.9
Migut.K00478 Erythranthe guttata HOM05D003537 ORTHO05D004180 5.1e-13 78.6 132 40.9
CARHR156330 Cardamine hirsuta HOM05D003537 ORTHO05D004180 8.7e-13 77.8 140 47.9
Potri.018G068300 Populus trichocarpa HOM05D003537 ORTHO05D004180 8.7e-13 77.8 121 39.7
Solyc12g009440.2 Solanum lycopersicum HOM05D003537 ORTHO05D004180 8.7e-13 77.8 82 65.9
Sopen12g004440 Solanum pennellii HOM05D003537 ORTHO05D004180 8.7e-13 77.8 82 65.9
unitig_26.g9662 Utricularia gibba HOM05D003537 ORTHO05D004180 8.7e-13 77.8 82 46.3
Lalb_Chr13g0301861 Lupinus albus HOM05D003537 ORTHO05D004180 1.1e-12 77.4 131 52.7
Oeu018469.1 Olea europaea HOM05D003537 ORTHO05D004180 1.1e-12 77.4 118 49.2
PSO170G5454 Papaver somniferum HOM05D003537 ORTHO05D004180 1.1e-12 77.4 136 46.3
Lj4g0026965 Lotus japonicus HOM05D003537 ORTHO05D004180 1.5e-12 77.0 131 41.2
Lalb_Chr07g0178961 Lupinus albus HOM05D003537 ORTHO05D004180 1.9e-12 76.6 132 48.5
BcaB01g00893 Brassica carinata HOM05D003537 ORTHO05D004180 2.5e-12 76.3 86 43.0
Gohir.D06G099500 Gossypium hirsutum HOM05D003537 ORTHO05D004180 2.5e-12 76.3 126 46.0
ECA246G5170 Erigeron canadensis HOM05D003537 ORTHO05D004180 3.3e-12 75.9 130 36.2
MELO3C004506.2 Cucumis melo HOM05D003537 ORTHO05D004180 4.3e-12 75.5 150 41.3
Hma1.2p1_0018F.1_g012400 Hydrangea macrophylla HOM05D003537 ORTHO05D004180 4.3e-12 75.5 140 31.4
A06p19950 Brassica napus HOM05D003537 ORTHO05D004180 5.6e-12 75.1 105 49.5
BraA06t25078Z Brassica rapa HOM05D003537 ORTHO05D004180 5.6e-12 75.1 105 49.5
Pp3c18_21980 Physcomitrium patens HOM05D003537 ORTHO05D004180 5.6e-12 75.1 91 39.6
AL5G26940 Arabidopsis lyrata HOM05D003537 ORTHO05D004180 7.4e-12 74.7 137 35.0
AUR62011130 Chenopodium quinoa HOM05D003537 ORTHO05D004180 9.6e-12 74.3 133 45.1
MSTRG.21979 Avicennia marina HOM05D003537 ORTHO05D004180 1.3e-11 73.9 121 36.4
Migut.K00479 Erythranthe guttata HOM05D003537 ORTHO05D004180 1.3e-11 73.9 99 40.4
THA.LOC104815279 Tarenaya hassleriana HOM05D003537 ORTHO05D004180 1.3e-11 73.9 132 44.7
TPR.G10724 Trifolium pratense HOM05D003537 ORTHO05D004180 1.6e-11 73.6 142 38.0
SGA_v2.0_scaffold12G06124 Striga asiatica HOM05D003537 ORTHO05D004180 2.1e-11 73.2 82 42.7
AUR62013357 Chenopodium quinoa HOM05D003537 ORTHO05D004180 2.8e-11 72.8 133 44.4
HPP92_000667 Vanilla planifolia HOM05D003537 ORTHO05D004180 2.8e-11 72.8 130 43.8
Aa31LG8G16720 Aethionema arabicum HOM05D003537 ORTHO05D004180 3.7e-11 72.4 81 51.9
HanXRQChr09g0242821 Helianthus annuus HOM05D003537 ORTHO05D004180 3.7e-11 72.4 131 50.4
C03p71880 Brassica napus HOM05D003537 ORTHO05D004180 4.8e-11 72.0 86 64.0
BraA06t25666Z Brassica rapa HOM05D003537 ORTHO05D004180 8.1e-11 71.2 138 47.1
Ah.14g079820 Amaranthus hybridus HOM05D003537 ORTHO05D004180 1.1e-10 70.9 114 39.5
Carub.0005s1378 Capsella rubella HOM05D003537 ORTHO05D004180 1.1e-10 70.9 122 48.4
Mapoly0035s0118 Marchantia polymorpha HOM05D002896 ORTHO05D003263 1.1e-10 70.9 121 44.6
Hund09242 Selenicereus undatus HOM05D003537 ORTHO05D004180 1.1e-10 70.9 72 70.8
Lsat_1_v5_gn_8_58621 Lactuca sativa HOM05D003537 ORTHO05D004180 1.4e-10 70.5 97 39.2
BcaC01g01786 Brassica carinata HOM05D003537 ORTHO05D004180 1.8e-10 70.1 86 55.8
ATR1120G202 Amborella trichopoda HOM05D003537 ORTHO05D004180 2.4e-10 69.7 78 53.8
Gohir.A06G143050 Gossypium hirsutum HOM05D003537 ORTHO05D004180 2.4e-10 69.7 114 34.2
BcaB02g10692 Brassica carinata HOM05D003537 ORTHO05D004180 3.1e-10 69.3 125 48.0
Sp5g14270 Schrenkiella parvula HOM05D003537 ORTHO05D004180 4.0e-10 68.9 122 45.9
SGA_v2.0_scaffold17G08031 Striga asiatica HOM05D003537 ORTHO05D004180 4.0e-10 68.9 85 44.7
AT3G47650 Arabidopsis thaliana HOM05D003537 ORTHO05D004180 5.3e-10 68.6 137 42.3
A06p27250 Brassica napus HOM05D003537 ORTHO05D004180 6.9e-10 68.2 142 38.7
BcaB05g23065 Brassica carinata HOM05D003537 ORTHO05D004180 9.0e-10 67.8 87 62.1
A01p25800 Brassica napus HOM05D003537 ORTHO05D004180 9.0e-10 67.8 87 54.0
BraA01t02496Z Brassica rapa HOM05D003537 ORTHO05D004180 9.0e-10 67.8 87 54.0
BcaC09g49812 Brassica carinata HOM05D003537 ORTHO05D004180 3.4e-09 65.9 87 59.8
C01p32690 Brassica napus HOM05D003537 ORTHO05D004180 3.4e-09 65.9 87 59.8
BolC1t03207H Brassica oleracea HOM05D003537 ORTHO05D004180 3.4e-09 65.9 87 57.5
Duzib168G0240 Durio zibethinus HOM05D003537 ORTHO05D004180 3.4e-09 65.9 112 35.7
SalBow1G5494 Salvia bowleyana HOM05D003537 ORTHO05D004180 4.5e-09 65.5 106 36.8
SMO145G0190 Selaginella moellendorffii HOM05D003537 ORTHO05D004180 4.5e-09 65.5 67 43.3
SEGI_36836 Sequoiadendron giganteum HOM05D003537 ORTHO05D004180 1.0e-08 64.3 146 37.7
CDE06G2093 Ceratophyllum demersum HOM05D003537 ORTHO05D004180 1.7e-08 63.5 93 49.5
CDE04G0424 Ceratophyllum demersum HOM05D003537 ORTHO05D004180 2.9e-08 62.8 122 42.6
FAN26G0344 Fragaria x ananassa HOM05D003537 ORTHO05D004180 6.5e-08 61.6 54 66.7
Peaxi162Scf00256g00035 Petunia axillaris HOM05D003537 ORTHO05D004180 8.4e-08 61.2 105 35.2
vmacro23102 Vaccinium macrocarpon HOM05D003537 ORTHO05D004180 3.2e-07 59.3 81 56.8
Lsat_1_v5_gn_5_30800 Lactuca sativa HOM05D003537 ORTHO05D004180 7.1e-07 58.2 57 49.1
Aqoxy7G02181 Aquilegia oxysepala HOM05D003537 ORTHO05D004180 1.2e-06 57.4 87 52.9
MELO3C030460.2 Cucumis melo HOM05D003537 ORTHO05D004180 1.6e-06 57.0 98 44.9


User provided reference genes

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