Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN27G1328 Fragaria x ananassa HOM05D006255 ORTHO05D008014 6.2e-76 288.1 242 100.0
FAN24G2083 Fragaria x ananassa HOM05D006255 ORTHO05D008014 7.6e-74 281.2 242 98.3
FAN15G2553 Fragaria x ananassa HOM05D006255 ORTHO05D008014 1.1e-67 260.8 228 95.6
FvH4_2g15950 Fragaria vesca HOM05D006255 ORTHO05D008014 3.1e-67 259.2 228 98.7
RcHm_v2.0_Chr6g0279491 Rosa chinensis HOM05D006255 ORTHO05D008014 2.9e-65 252.7 228 96.9
CsaV3_7G001410 Cucumis sativus L. HOM05D006255 ORTHO05D008014 4.8e-60 235.3 226 70.4
Sed0016506 Sechium edule HOM05D006255 ORTHO05D008014 8.2e-60 234.6 226 58.4
PGR142G2886 Punica granatum HOM05D006255 ORTHO05D008014 3.1e-59 232.6 228 71.5
Sed0013069 Sechium edule HOM05D006255 ORTHO05D008014 5.3e-59 231.9 226 68.6
ClCG02G003730 Citrullus lanatus HOM05D006255 ORTHO05D008014 9.0e-59 231.1 225 71.6
MELO3C013309.2 Cucumis melo HOM05D006255 ORTHO05D008014 1.5e-58 230.3 226 72.1
Gohir.D01G162900 Gossypium hirsutum HOM05D006255 ORTHO05D008014 2.0e-58 229.9 228 72.8
Gorai.002G202100 Gossypium raimondii HOM05D006255 ORTHO05D008014 2.0e-58 229.9 228 72.8
Prupe.8G172600 Prunus persica HOM05D006255 ORTHO05D008014 2.6e-58 229.6 228 71.5
Ciclev10029213m.g Citrus clementina HOM05D006255 ORTHO05D008014 3.4e-58 229.2 228 65.8
Eucgr.I01476 Eucalyptus grandis HOM05D006255 ORTHO05D008014 5.8e-58 228.4 226 68.1
Lj9A402T69 Lonicera japonica HOM05D006255 ORTHO05D008014 1.0e-57 227.6 226 66.8
Atru.chr5.3479 Acer truncatum HOM05D006255 ORTHO05D008014 2.9e-57 226.1 228 70.2
Duzib248G1128 Durio zibethinus HOM05D006255 ORTHO05D008014 5.0e-57 225.3 228 68.0
Actinidia20544 Actinidia chinensis HOM05D006255 ORTHO05D008014 1.1e-56 224.2 226 66.4
arahy.Tifrunner.gnm1.ann1.K7U5ID Arachis hypogaea HOM05D006255 ORTHO05D008014 1.4e-56 223.8 229 68.6
HanXRQChr16g0527781 Helianthus annuus HOM05D006255 ORTHO05D008014 1.4e-56 223.8 228 75.9
Nn5g30887 Nelumbo nucifera HOM05D006255 ORTHO05D008014 1.4e-56 223.8 227 62.1
ECA233G3172 Erigeron canadensis HOM05D006255 ORTHO05D008014 1.9e-56 223.4 230 70.0
MD10G1131800 Malus domestica HOM05D006255 ORTHO05D008014 1.9e-56 223.4 228 78.9
Nn6g31846 Nelumbo nucifera HOM05D006255 ORTHO05D008014 1.9e-56 223.4 228 74.1
Thecc.02G052300 Theobroma cacao HOM05D006255 ORTHO05D008014 1.9e-56 223.4 228 74.6
TAR625G0439 Trochodendron aralioides HOM05D006255 ORTHO05D008014 2.5e-56 223.0 228 60.5
arahy.Tifrunner.gnm1.ann1.5E63QU Arachis hypogaea HOM05D006255 ORTHO05D008014 4.2e-56 222.2 229 68.1
Lsat_1_v5_gn_8_122201 Lactuca sativa HOM05D006255 ORTHO05D008014 4.2e-56 222.2 225 76.4
Gohir.D12G037200 Gossypium hirsutum HOM05D006255 ORTHO05D008014 7.2e-56 221.5 228 75.9
Manes.11G100600 Manihot esculenta HOM05D006255 ORTHO05D008014 7.2e-56 221.5 228 62.7
Medtr3g118350 Medicago truncatula HOM05D006255 ORTHO05D008014 1.2e-55 220.7 226 70.8
TWI31G0945 Tripterygium wilfordii HOM05D006255 ORTHO05D008014 1.2e-55 220.7 228 64.9
vmacro02304 Vaccinium macrocarpon HOM05D006255 ORTHO05D008014 1.2e-55 220.7 226 62.8
Sc08g0002620 Simmondsia chinensis HOM05D006255 ORTHO05D008014 1.6e-55 220.3 225 79.1
TPR.G38579 Trifolium pratense HOM05D006255 ORTHO05D008014 1.6e-55 220.3 230 76.1
PSO675G3819 Papaver somniferum HOM05D006255 ORTHO05D008014 2.1e-55 219.9 228 78.9
Gohir.A12G035500 Gossypium hirsutum HOM05D006255 ORTHO05D008014 2.7e-55 219.5 228 67.1
Gorai.008G038300 Gossypium raimondii HOM05D006255 ORTHO05D008014 3.5e-55 219.2 228 76.3
Hma1.2p1_0163F.1_g072870 Hydrangea macrophylla HOM05D006255 ORTHO05D008014 7.9e-55 218.0 226 72.6
Cpa.g.sc20.136 Carica papaya HOM05D006255 ORTHO05D008014 2.3e-54 216.5 226 71.7
Nitab4.5_0001629g0040 Nicotiana tabacum HOM05D006255 ORTHO05D008014 2.3e-54 216.5 226 77.9
THA.LOC104804084 Tarenaya hassleriana HOM05D006255 ORTHO05D008014 3.0e-54 216.1 228 64.5
Cc09_g10450 Coffea canephora HOM05D006255 ORTHO05D008014 3.9e-54 215.7 223 71.3
Nitab4.5_0001215g0050 Nicotiana tabacum HOM05D006255 ORTHO05D008014 3.9e-54 215.7 226 78.8
Nitab4.5_0003603g0130 Nicotiana tabacum HOM05D006255 ORTHO05D008014 3.9e-54 215.7 227 70.0
MD05G1128500 Malus domestica HOM05D006255 ORTHO05D008014 6.7e-54 214.9 228 81.1
COL.COLO4_18000 Corchorus olitorius HOM05D006255 ORTHO05D008014 1.1e-53 214.2 225 73.3
SGA_v2.0_scaffold32G13327 Striga asiatica HOM05D006255 ORTHO05D008014 1.1e-53 214.2 226 75.7
Aqoxy5G01073 Aquilegia oxysepala HOM05D006255 ORTHO05D008014 1.9e-53 213.4 229 67.2
Nitab4.5_0001506g0010 Nicotiana tabacum HOM05D006255 ORTHO05D008014 1.9e-53 213.4 228 71.9
Psat5g000920 Pisum sativum HOM05D006255 ORTHO05D008014 1.9e-53 213.4 225 78.2
MSTRG.16938 Avicennia marina HOM05D006255 ORTHO05D008014 2.5e-53 213.0 226 69.0
CANSAT25G2216 Cannabis sativa HOM05D006255 ORTHO05D008014 3.3e-53 212.6 228 73.7
Actinidia18024 Actinidia chinensis HOM05D006255 ORTHO05D008014 7.4e-53 211.5 226 69.0
SalBow1G8078 Salvia bowleyana HOM05D006255 ORTHO05D010524 7.4e-53 211.5 225 76.4
Ca_15278_v3 Cicer arietinum L. HOM05D006255 ORTHO05D008014 9.7e-53 211.1 226 82.3
MBI05_g35101_MAGBIO Magnolia biondii HOM05D006255 ORTHO05D008014 9.7e-53 211.1 225 60.0
MSTRG.19958 Avicennia marina HOM05D006255 ORTHO05D008014 1.6e-52 210.3 226 66.4
CSS0039919 Camellia sinensis var. sinensis HOM05D006255 ORTHO05D008014 1.6e-52 210.3 226 58.4
Sopen01g053990 Solanum pennellii HOM05D006255 ORTHO05D008014 1.6e-52 210.3 226 66.4
Lj4g0004587 Lotus japonicus HOM05D006255 ORTHO05D008014 2.8e-52 209.5 229 76.4
Solyc01g111940.4 Solanum lycopersicum HOM05D006255 ORTHO05D008014 3.7e-52 209.1 226 65.9
CiPaw.05G087400 Carya illinoinensis HOM05D006255 ORTHO05D008014 6.3e-52 208.4 228 77.2
Dinv14143 Davidia involucrata HOM05D006255 ORTHO05D008014 6.3e-52 208.4 228 71.9
EL10Ac9g21307 Beta vulgaris HOM05D006255 ORTHO05D008014 8.2e-52 208.0 228 68.4
ATR0661G177 Amborella trichopoda HOM05D006255 ORTHO05D008014 1.4e-51 207.2 235 60.9
Peaxi162Scf00362g00349 Petunia axillaris HOM05D006255 ORTHO05D008014 1.8e-51 206.8 226 73.0
PSO541G1652 Papaver somniferum HOM05D006255 ORTHO05D008014 4.1e-51 205.7 228 77.2
unitig_0.g812 Utricularia gibba HOM05D006255 ORTHO05D008014 4.1e-51 205.7 223 71.7
Cfa005320 Carpinus fangiana HOM05D006255 ORTHO05D010524 5.3e-51 205.3 222 71.6
Phvul.009G117000 Phaseolus vulgaris HOM05D006255 ORTHO05D008014 6.9e-51 204.9 228 68.0
Potri.009G140200 Populus trichocarpa HOM05D006255 ORTHO05D008014 6.9e-51 204.9 225 66.7
PGSC0003DMG401018633 Solanum tuberosum HOM05D006255 ORTHO05D008014 1.2e-50 204.1 223 64.1
Ah.01g007960 Amaranthus hybridus HOM05D006255 ORTHO05D008014 2.0e-50 203.4 229 70.7
QL11p053294 Quercus lobata HOM05D006255 ORTHO05D008014 1.3e-49 200.7 234 73.1
Duzib132G0230 Durio zibethinus HOM05D006255 ORTHO05D008014 2.9e-49 199.5 228 82.5
Aa31LG9G40 Aethionema arabicum HOM05D006255 ORTHO05D008014 1.1e-48 197.6 244 65.2
Gohir.A01G171900 Gossypium hirsutum HOM05D006255 ORTHO05D008014 1.9e-48 196.8 154 67.5
Aa31LG7G15760 Aethionema arabicum HOM05D007460 ORTHO05D009396 2.5e-48 196.4 244 63.5
Carub.0001s1596 Capsella rubella HOM05D006255 ORTHO05D008014 2.1e-47 193.4 225 64.4
BolC6t39525H Brassica oleracea HOM05D006255 ORTHO05D008014 1.0e-46 191.0 227 76.7
C06p44610 Brassica napus HOM05D002002 ORTHO05D008711 2.3e-46 189.9 225 76.9
BcaB03g14827 Brassica carinata HOM05D002002 ORTHO05D008711 6.7e-46 188.3 225 76.9
CARHR016680 Cardamine hirsuta HOM05D006255 ORTHO05D008014 1.1e-45 187.6 225 71.1
Sabra09G0108900 Salix brachista HOM05D006255 ORTHO05D008014 1.5e-45 187.2 264 59.8
HPP92_025891 Vanilla planifolia HOM05D006255 ORTHO05D008014 1.5e-45 187.2 226 50.0
Glyma.04G001700 Glycine max HOM05D006255 ORTHO05D008014 2.0e-45 186.8 228 70.2
BraA07t31267Z Brassica rapa HOM05D006255 ORTHO05D008014 2.5e-45 186.4 227 75.8
CDE02G2216 Ceratophyllum demersum HOM05D006255 ORTHO05D008014 5.7e-45 185.3 226 61.9
Glyma.06G001200 Glycine max HOM05D006255 ORTHO05D008014 7.4e-45 184.9 228 64.0
AL1G28330 Arabidopsis lyrata HOM05D006255 ORTHO05D008014 9.7e-45 184.5 225 63.6
VMungo1309G1654 Vigna mungo HOM05D006255 ORTHO05D008014 9.7e-45 184.5 228 74.1
A07p37050 Brassica napus HOM05D002002 ORTHO05D008711 1.3e-44 184.1 225 75.6
BcaB03g14828 Brassica carinata HOM05D006255 ORTHO05D008014 2.2e-44 183.3 140 85.0
Lalb_Chr08g0246771 Lupinus albus HOM05D006255 ORTHO05D008014 2.8e-44 183.0 234 67.9
Sp4g00050 Schrenkiella parvula HOM05D006255 ORTHO05D008014 4.8e-44 182.2 236 66.1
Oeu029013.1 Olea europaea HOM05D006255 ORTHO05D008014 8.2e-44 181.4 225 58.2
Os04g0561600 Oryza sativa ssp. japonica HOM05D006255 ORTHO05D008014 4.1e-43 179.1 230 55.2
Pp3c7_26990 Physcomitrium patens HOM05D006255 ORTHO05D008014 2.0e-42 176.8 227 59.5
SMO119G0083 Selaginella moellendorffii HOM05D006255 ORTHO05D008014 1.7e-41 173.7 229 50.2
Haze_02065 Corylus avellana HOM05D006255 ORTHO05D008014 2.2e-41 173.3 328 52.1
CBR_g61263 Chara braunii HOM05D006255 ORTHO05D008014 2.1e-39 166.8 225 48.0
Zm00001eb074070 Zea mays HOM05D006255 ORTHO05D008014 2.3e-38 163.3 141 70.9
Pp3c11_730 Physcomitrium patens HOM05D006255 ORTHO05D008014 9.7e-37 157.9 227 54.2
CDE09G0466 Ceratophyllum demersum HOM05D006255 ORTHO05D008014 1.7e-36 157.1 91 80.2
Pp3c11_731 Physcomitrium patens HOM05D006255 ORTHO05D008014 1.7e-36 157.1 227 54.2
HPP92_022389 Vanilla planifolia HOM05D006255 ORTHO05D008014 2.2e-36 156.8 223 43.5
AT1G16210 Arabidopsis thaliana HOM05D006255 ORTHO05D008014 2.8e-36 156.4 225 55.6
Os03g0131800 Oryza sativa ssp. japonica HOM05D006255 ORTHO05D008014 2.8e-36 156.4 230 53.9
Lj5C174T15 Lonicera japonica HOM05D006255 ORTHO05D008014 8.2e-36 154.8 225 68.9
AagrBONN_evm.TU.Sc2ySwM_368.1212 Anthoceros agrestis HOM05D006255 ORTHO05D008014 1.8e-35 153.7 227 52.9
Mapoly0058s0055 Marchantia polymorpha HOM05D006255 ORTHO05D008014 9.1e-35 151.4 231 48.1
CAN.G1235.32 Capsicum annuum HOM05D006255 ORTHO05D008014 1.2e-31 141.0 187 67.4
Ah.01g023450 Amaranthus hybridus HOM05D000939 ORTHO05D000745 1.4e-30 137.5 210 62.9
AUR62009986 Chenopodium quinoa HOM05D006255 ORTHO05D008014 1.4e-30 137.5 225 48.4
GSVIVG01023898001 Vitis vinifera HOM05D006255 ORTHO05D008014 1.0e-25 121.3 65 83.1
C06p36040 Brassica napus HOM05D006255 ORTHO05D008014 4.2e-24 115.9 71 78.9
BolC6t38725H Brassica oleracea HOM05D006255 ORTHO05D008014 4.7e-23 112.5 68 79.4
Peaxi162Scf00875g00037 Petunia axillaris HOM05D006255 ORTHO05D008014 8.0e-23 111.7 99 57.6
AUR62012975 Chenopodium quinoa HOM05D006255 ORTHO05D008014 3.7e-20 102.8 80 63.8
Cre14.g629500 Chlamydomonas reinhardtii HOM05D006255 ORTHO05D008014 2.4e-19 100.1 157 38.9
PRCOL_00005063 Prasinoderma coloniale HOM05D006255 ORTHO05D008014 2.4e-19 100.1 95 52.6
Gohir.A03G206650 Gossypium hirsutum HOM05D006255 ORTHO05D008014 3.1e-19 99.8 66 72.7
Gorai.005G255900 Gossypium raimondii HOM05D006255 ORTHO05D008014 4.5e-18 95.9 70 68.6
Migut.H01073 Erythranthe guttata HOM05D006255 ORTHO05D008014 1.6e-15 87.4 149 40.9
MCO11G585 Micromonas commoda HOM05D006255 ORTHO05D008014 2.8e-12 76.6 160 36.9
BcaC08g45811 Brassica carinata HOM05D006255 ORTHO05D008014 2.9e-09 66.6 40 77.5
PSO541G1702 Papaver somniferum HOM05D006255 ORTHO05D008014 2.8e-07 60.1 94 46.8
Cfa024524 Carpinus fangiana HOM05D006255 ORTHO05D008014 1.4e-06 57.8 78 42.3


User provided reference genes

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