Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN15G3515 Fragaria x ananassa HOM05D007255 ORTHO05D009052 3.9e-131 471.5 235 100.0
FAN27G1291 Fragaria x ananassa HOM05D007255 ORTHO05D009052 3.9e-131 471.5 235 100.0
FvH4_2g17870 Fragaria vesca HOM05D007255 ORTHO05D009052 1.2e-129 466.5 235 98.7
FAN24G0557 Fragaria x ananassa HOM05D007255 ORTHO05D009052 8.0e-129 463.8 235 98.3
RcHm_v2.0_Chr6g0282891 Rosa chinensis HOM05D007255 ORTHO05D009052 2.5e-122 442.2 235 92.3
Prupe.8G191100 Prunus persica HOM05D007255 ORTHO05D009052 3.6e-105 385.2 238 81.1
MD10G1152600 Malus domestica HOM05D007255 ORTHO05D009052 3.6e-97 358.6 259 72.6
Thecc.01G211700 Theobroma cacao HOM05D007255 ORTHO05D009052 1.5e-95 353.2 233 75.1
COL.COLO4_28926 Corchorus olitorius HOM05D007255 ORTHO05D009052 5.1e-91 338.2 237 72.2
Duzib211G0668 Durio zibethinus HOM05D007255 ORTHO05D009052 6.6e-91 337.8 233 73.4
QL09p046138 Quercus lobata HOM05D007255 ORTHO05D009052 1.5e-90 336.7 238 69.3
CiPaw.13G054800 Carya illinoinensis HOM05D007255 ORTHO05D009052 1.9e-90 336.3 238 72.3
Potri.002G250500 Populus trichocarpa HOM05D007255 ORTHO05D009052 1.1e-88 330.5 231 71.9
CANSAT01G0773 Cannabis sativa HOM05D007255 ORTHO05D009052 1.8e-88 329.7 237 69.6
Sabra02G0190600 Salix brachista HOM05D007255 ORTHO05D009052 2.4e-88 329.3 231 71.9
Manes.13G054000 Manihot esculenta HOM05D007255 ORTHO05D009052 4.0e-88 328.6 231 71.4
Cpa.g.sc8.78 Carica papaya HOM05D007255 ORTHO05D009052 1.5e-87 326.6 231 69.7
Eucgr.K02090 Eucalyptus grandis HOM05D007255 ORTHO05D009052 2.0e-87 326.2 239 71.1
Ciclev10016497m.g Citrus clementina HOM05D007255 ORTHO05D009052 4.5e-87 325.1 238 73.9
Gorai.007G159200 Gossypium raimondii HOM05D007255 ORTHO05D009052 1.7e-86 323.2 235 69.4
PGR044G0433 Punica granatum HOM05D007255 ORTHO05D009052 3.8e-86 322.0 238 71.8
Atru.chr6.3551 Acer truncatum HOM05D007255 ORTHO05D009052 6.4e-86 321.2 238 69.7
Hma1.2p1_0161F.1_g071360 Hydrangea macrophylla HOM05D007255 ORTHO05D009052 8.4e-86 320.9 238 68.5
Gohir.A11G142200 Gossypium hirsutum HOM05D007255 ORTHO05D009052 1.4e-85 320.1 235 68.9
Gohir.D11G148500 Gossypium hirsutum HOM05D007255 ORTHO05D009052 1.4e-85 320.1 235 68.9
Thhalv10004862m.g Eutrema salsugineum HOM05D007255 ORTHO05D009052 5.5e-85 318.2 227 69.2
Carub.0003s0699 Capsella rubella HOM05D007255 ORTHO05D009052 7.1e-85 317.8 221 71.0
Dinv10428 Davidia involucrata HOM05D007255 ORTHO05D009052 7.1e-85 317.8 239 66.9
AL3G18750 Arabidopsis lyrata HOM05D007255 ORTHO05D009052 1.6e-84 316.6 221 71.0
Ca_23187_v3 Cicer arietinum L. HOM05D007255 ORTHO05D009052 2.1e-84 316.2 236 68.6
Ca_30803_v3 Cicer arietinum L. HOM05D007255 ORTHO05D009052 2.1e-84 316.2 236 68.6
Aa31LG5G18020 Aethionema arabicum HOM05D007255 ORTHO05D009052 6.0e-84 314.7 232 68.5
CARHR082090 Cardamine hirsuta HOM05D007255 ORTHO05D009052 6.0e-84 314.7 230 69.1
TPR.G15196 Trifolium pratense HOM05D007255 ORTHO05D009052 2.3e-83 312.8 238 67.2
arahy.Tifrunner.gnm1.ann1.TV22BE Arachis hypogaea HOM05D007255 ORTHO05D009052 1.5e-82 310.1 248 64.9
C07p39220 Brassica napus HOM05D007255 ORTHO05D009052 1.5e-82 310.1 231 68.4
BolC7t44442H Brassica oleracea HOM05D007255 ORTHO05D009052 1.5e-82 310.1 231 68.4
AT3G07440 Arabidopsis thaliana HOM05D007255 ORTHO05D009052 1.9e-82 309.7 221 70.1
BraA06t26826Z Brassica rapa HOM05D007255 ORTHO05D009052 3.3e-82 308.9 231 68.4
A06p39120 Brassica napus HOM05D007255 ORTHO05D009052 5.6e-82 308.1 231 68.4
Glyma.03G089600 Glycine max HOM05D007255 ORTHO05D009052 1.3e-81 307.0 238 68.1
Phvul.010G031200 Phaseolus vulgaris HOM05D007255 ORTHO05D009052 2.8e-81 305.8 242 68.6
TWI18G1029 Tripterygium wilfordii HOM05D007255 ORTHO05D009052 3.7e-81 305.4 233 69.5
Actinidia34549 Actinidia chinensis HOM05D007255 ORTHO05D009052 8.1e-81 304.3 237 67.9
THA.LOC104818995 Tarenaya hassleriana HOM05D007255 ORTHO05D009052 8.1e-81 304.3 234 66.7
TAR365G1235 Trochodendron aralioides HOM05D007255 ORTHO05D009052 8.1e-81 304.3 242 66.1
Lj3g0001968 Lotus japonicus HOM05D007255 ORTHO05D009052 1.1e-80 303.9 248 63.3
MSTRG.18490 Avicennia marina HOM05D007255 ORTHO05D009052 1.4e-80 303.5 244 67.6
Oeu064665.2 Olea europaea HOM05D007255 ORTHO05D009052 1.4e-80 303.5 259 62.9
SGA_v2.0_scaffold29G12102 Striga asiatica HOM05D007255 ORTHO05D009052 1.4e-80 303.5 243 65.0
Lalb_Chr12g0210041 Lupinus albus HOM05D007255 ORTHO05D009052 1.8e-80 303.1 234 66.2
Rhsim01G0248900 Rhododendron simsii HOM05D007255 ORTHO05D009052 1.8e-80 303.1 244 65.6
SalBow6G0858 Salvia bowleyana HOM05D007255 ORTHO05D009052 2.4e-80 302.8 246 66.3
Medtr8g011480 Medicago truncatula HOM05D007255 ORTHO05D009052 4.0e-80 302.0 235 66.4
Sp2g18890 Schrenkiella parvula HOM05D007255 ORTHO05D009052 5.3e-80 301.6 230 67.4
Sc05g0001760 Simmondsia chinensis HOM05D007255 ORTHO05D009052 6.9e-80 301.2 240 67.1
Aqoxy5G00040 Aquilegia oxysepala HOM05D007255 ORTHO05D009052 9.0e-80 300.8 238 66.8
Cc01_g16200 Coffea canephora HOM05D007255 ORTHO05D009052 2.6e-79 299.3 245 65.3
MELO3C012737.2 Cucumis melo HOM05D007255 ORTHO05D009052 1.7e-78 296.6 238 66.8
Nitab4.5_0000038g0080 Nicotiana tabacum HOM05D007255 ORTHO05D009052 2.9e-78 295.8 240 62.9
Lsat_1_v5_gn_5_178401 Lactuca sativa HOM05D007255 ORTHO05D009052 6.5e-78 294.7 241 63.9
BcaC06g30785 Brassica carinata HOM05D007255 ORTHO05D009052 8.4e-78 294.3 224 67.9
Nitab4.5_0005972g0030 Nicotiana tabacum HOM05D007255 ORTHO05D009052 1.4e-77 293.5 240 62.1
vmacro14695 Vaccinium macrocarpon HOM05D007255 ORTHO05D009052 4.2e-77 292.0 245 64.5
Migut.D00726 Erythranthe guttata HOM05D007255 ORTHO05D009052 7.1e-77 291.2 244 62.7
ClCG09G008130 Citrullus lanatus HOM05D007352 ORTHO05D009052 1.2e-76 290.4 271 59.4
Solyc09g058990.3 Solanum lycopersicum HOM05D007255 ORTHO05D009052 4.6e-76 288.5 241 62.2
Nn1g08274 Nelumbo nucifera HOM05D007255 ORTHO05D009052 7.9e-76 287.7 309 52.4
CsaV3_7G026920 Cucumis sativus L. HOM05D007255 ORTHO05D009052 1.8e-75 286.6 235 64.3
Hund02793 Selenicereus undatus HOM05D007255 ORTHO05D009052 5.1e-75 285.0 239 63.2
Sopen09g020080 Solanum pennellii HOM05D007255 ORTHO05D009052 5.1e-75 285.0 241 61.8
arahy.Tifrunner.gnm1.ann1.UDT0KZ Arachis hypogaea HOM05D007255 ORTHO05D009052 1.5e-74 283.5 206 70.4
ECA248G0740 Erigeron canadensis HOM05D007255 ORTHO05D009052 1.9e-74 283.1 240 62.9
PSO170G5614 Papaver somniferum HOM05D007255 ORTHO05D009052 5.7e-74 281.6 207 68.6
Ah.11g051090 Amaranthus hybridus HOM05D007255 ORTHO05D009052 1.6e-73 280.0 239 63.2
PSO357G0536 Papaver somniferum HOM05D007255 ORTHO05D009052 2.8e-73 279.3 207 68.6
Sed0001908 Sechium edule HOM05D007255 ORTHO05D009052 8.2e-73 277.7 237 63.7
EL10Ac5g10635 Beta vulgaris HOM05D007255 ORTHO05D009052 1.1e-72 277.3 237 63.3
Nn1g03664 Nelumbo nucifera HOM05D007255 ORTHO05D009052 5.9e-71 271.6 235 60.9
AT5G48530 Arabidopsis thaliana HOM05D007255 ORTHO05D009052 2.9e-70 269.2 195 70.8
AUR62028710 Chenopodium quinoa HOM05D007255 ORTHO05D009052 7.9e-68 261.2 257 57.6
Os02g0478500 Oryza sativa ssp. japonica HOM05D007255 ORTHO05D009052 1.0e-67 260.8 174 72.4
unitig_62.g23864 Utricularia gibba HOM05D007255 ORTHO05D009052 6.7e-67 258.1 230 58.7
Aqoxy2G00044 Aquilegia oxysepala HOM05D007255 ORTHO05D009052 1.3e-65 253.8 181 71.8
GSVIVG01006076001 Vitis vinifera HOM05D007255 ORTHO05D009052 1.6e-65 253.4 159 80.5
unitig_64.g29772 Utricularia gibba HOM05D007255 ORTHO05D009052 1.4e-64 250.4 229 56.8
Zm00001eb241080 Zea mays HOM05D007255 ORTHO05D009052 1.4e-64 250.4 187 67.9
ATR0491G001 Amborella trichopoda HOM05D007255 ORTHO05D009052 3.4e-63 245.7 179 68.7
Haze_03304 Corylus avellana HOM05D007255 ORTHO05D009052 7.7e-63 244.6 170 74.7
CSS0043687 Camellia sinensis var. sinensis HOM05D007255 ORTHO05D009052 8.5e-62 241.1 159 78.0
HanXRQChr01g0025051 Helianthus annuus HOM05D007255 ORTHO05D009052 4.2e-61 238.8 200 67.0
Lj1A100G17 Lonicera japonica HOM05D007255 ORTHO05D009052 7.4e-58 228.0 180 69.4
DCAR_018628 Daucus carota HOM05D007255 ORTHO05D009052 6.3e-57 224.9 161 71.4
Peaxi162Scf00335g01514 Petunia axillaris HOM05D007255 ORTHO05D009052 2.4e-56 223.0 242 53.3
Actinidia23788 Actinidia chinensis HOM05D007255 ORTHO05D009052 2.8e-49 199.5 197 56.3
Glyma.16G083400 Glycine max HOM05D007255 ORTHO05D009052 1.6e-39 167.2 107 77.6
AUR62008128 Chenopodium quinoa HOM05D007255 ORTHO05D009052 6.5e-38 161.8 135 64.4
HPP92_024260 Vanilla planifolia HOM05D007255 ORTHO05D009052 1.1e-37 161.0 134 61.2
VMungo0331G1225 Vigna mungo HOM05D007255 ORTHO05D009052 1.9e-29 133.7 94 74.5
Prupe.8G191300 Prunus persica HOM05D007255 ORTHO05D009052 2.3e-27 126.7 91 71.4
VMungo0331G0526 Vigna mungo HOM05D007255 ORTHO05D009052 6.8e-27 125.2 102 66.7
HPP92_024228 Vanilla planifolia HOM05D007255 ORTHO05D009052 5.7e-26 122.1 111 59.5
CDE04G1852 Ceratophyllum demersum HOM05D007255 ORTHO05D009052 5.0e-22 109.0 76 68.4
SEGI_09952 Sequoiadendron giganteum HOM05D007255 ORTHO05D009052 1.5e-18 97.4 74 64.9
VMungo0251G0654 Vigna mungo HOM05D007255 ORTHO05D009052 5.4e-16 89.0 92 53.3
GSVIVG01006250001 Vitis vinifera HOM05D007255 ORTHO05D009052 2.3e-14 83.6 81 55.6
Psat0s4060g0280 Pisum sativum HOM05D007255 ORTHO05D009052 1.4e-11 74.3 72 61.1


User provided reference genes

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