Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN27G1149 Fragaria x ananassa HOM05D016497 ORTHO05D019154 2.5e-300 1034.6 520 100.0
FAN13G3118 Fragaria x ananassa HOM05D016497 ORTHO05D019154 4.2e-295 1017.3 520 98.5
FAN23G0814 Fragaria x ananassa HOM05D016497 ORTHO05D019154 4.8e-291 1003.8 512 98.8
FAN26G0292 Fragaria x ananassa HOM05D016497 ORTHO05D019154 1.8e-290 1001.9 512 98.6
FvH4_1g29794 Fragaria vesca HOM05D016497 ORTHO05D019154 9.8e-228 793.5 464 88.1
FvH4_2g35574 Fragaria vesca HOM05D016497 ORTHO05D019154 5.6e-215 751.1 520 76.7
FvH4_1g21382 Fragaria vesca HOM05D016497 ORTHO05D019154 6.0e-177 624.8 433 76.0
FAN19G0432 Fragaria x ananassa HOM05D016497 ORTHO05D019154 4.0e-96 356.3 186 90.9
RcHm_v2.0_Chr7g0194611 Rosa chinensis HOM05D009149 ORTHO05D003639 1.6e-20 105.1 189 36.0
RcHm_v2.0_Chr2g0105541 Rosa chinensis HOM05D009149 ORTHO05D003639 2.7e-20 104.4 198 34.8
RcHm_v2.0_Chr3g0493631 Rosa chinensis HOM05D009149 ORTHO05D003639 1.5e-18 98.6 157 36.9
RcHm_v2.0_Chr7g0239611 Rosa chinensis HOM05D009149 ORTHO05D003639 7.5e-18 96.3 171 35.7
Nitab4.5_0001698g0060 Nicotiana tabacum HOM05D008778 ORTHO05D003639 4.1e-16 90.5 221 27.6
RcHm_v2.0_Chr4g0410321 Rosa chinensis HOM05D009149 ORTHO05D003639 1.2e-15 89.0 147 36.7
RcHm_v2.0_Chr4g0419511 Rosa chinensis HOM05D009149 ORTHO05D003639 2.7e-15 87.8 174 35.6
RcHm_v2.0_Chr1g0350201 Rosa chinensis HOM05D009149 ORTHO05D003639 4.5e-15 87.0 346 28.0
RcHm_v2.0_Chr6g0291271 Rosa chinensis HOM05D009149 ORTHO05D003639 1.5e-13 82.0 466 25.1
RcHm_v2.0_Chr2g0131351 Rosa chinensis HOM05D009149 ORTHO05D003639 3.2e-13 80.9 345 27.0
Peaxi162Scf00820g00119 Petunia axillaris HOM05D008778 ORTHO05D003639 4.2e-13 80.5 158 32.3
Solyc05g010817.1 Solanum lycopersicum HOM05D008778 ORTHO05D003639 5.5e-13 80.1 202 30.7
Sopen00g002430 Solanum pennellii HOM05D008778 ORTHO05D003639 7.2e-13 79.7 202 30.2
Sopen00g007290 Solanum pennellii HOM05D008778 ORTHO05D003639 7.2e-13 79.7 202 30.2
Nitab4.5_0006587g0010 Nicotiana tabacum HOM05D008778 ORTHO05D003639 2.1e-12 78.2 120 36.7
Peaxi162Scf00820g00117 Petunia axillaris HOM05D008778 ORTHO05D003639 1.4e-11 75.5 161 32.3
FvH4_4g18552 Fragaria vesca HOM05D009149 ORTHO05D003639 8.8e-11 72.8 107 37.4
Cc00_g19240 Coffea canephora HOM05D009149 ORTHO05D003639 2.0e-10 71.6 159 31.4
PGSC0003DMG400002681 Solanum tuberosum HOM05D008778 ORTHO05D003639 4.4e-10 70.5 112 33.9
Nitab4.5_0001698g0040 Nicotiana tabacum HOM05D008778 ORTHO05D003639 2.4e-08 64.7 112 35.7
Sopen09g003890 Solanum pennellii HOM05D000006 ORTHO05D000001 2.4e-08 64.7 112 32.1
Nitab4.5_0000663g0010 Nicotiana tabacum HOM05D008778 ORTHO05D003639 5.4e-08 63.5 112 35.7
RcHm_v2.0_Chr2g0121071 Rosa chinensis HOM05D008702 ORTHO05D003639 5.4e-08 63.5 164 26.2
RcHm_v2.0_Chr2g0142701 Rosa chinensis HOM05D008702 ORTHO05D003639 5.4e-08 63.5 164 26.2
Oeu033711.1 Olea europaea HOM05D007843 ORTHO05D003639 1.6e-07 62.0 117 31.6
FvH4_5g16044 Fragaria vesca HOM05D060084 ORTHO05D046536 2.0e-07 61.6 262 24.8
RcHm_v2.0_Chr1g0321631 Rosa chinensis HOM05D008702 ORTHO05D003639 4.5e-07 60.5 151 25.8
RcHm_v2.0_Chr2g0138191 Rosa chinensis HOM05D008702 ORTHO05D003639 5.9e-07 60.1 164 25.6
Nitab4.5_0001698g0030 Nicotiana tabacum HOM05D008778 ORTHO05D003639 7.7e-07 59.7 112 33.9
Oeu019035.1 Olea europaea HOM05D007843 ORTHO05D003639 7.7e-07 59.7 101 33.7
Peaxi162Scf00169g01112 Petunia axillaris HOM05D008778 ORTHO05D003639 1.3e-06 58.9 112 30.4
Oeu009347.1 Olea europaea HOM05D007843 ORTHO05D003639 1.7e-06 58.5 99 34.3
Oeu057837.1 Olea europaea HOM05D007843 ORTHO05D003639 1.7e-06 58.5 101 34.7
Nitab4.5_0000663g0030 Nicotiana tabacum HOM05D008778 ORTHO05D003639 2.9e-06 57.8 112 33.0
Oeu001108.1 Olea europaea HOM05D007843 ORTHO05D003639 2.9e-06 57.8 101 33.7
Oeu026044.1 Olea europaea HOM05D007843 ORTHO05D003639 3.8e-06 57.4 101 33.7
Sopen09g003880 Solanum pennellii HOM05D008778 ORTHO05D003639 3.8e-06 57.4 112 30.4
Oeu050487.1 Olea europaea HOM05D007843 ORTHO05D003639 8.5e-06 56.2 101 32.7
Oeu054401.1 Olea europaea HOM05D007843 ORTHO05D003639 8.5e-06 56.2 151 27.8


User provided reference genes

Program Settings