Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN27G1128 Fragaria x ananassa HOM05D004108 ORTHO05D004849 6.7e-87 323.9 159 100.0
FvH4_2g39630 Fragaria vesca HOM05D004108 ORTHO05D004849 6.1e-80 300.8 160 93.1
FAN15G0289 Fragaria x ananassa HOM05D004108 ORTHO05D004849 3.9e-79 298.1 160 93.8
FAN20G2373 Fragaria x ananassa HOM05D004108 ORTHO05D004849 2.4e-76 288.9 162 90.1
RcHm_v2.0_Chr6g0301271 Rosa chinensis HOM05D004108 ORTHO05D004849 4.6e-51 204.9 159 72.3
Prupe.1G377400 Prunus persica HOM05D004108 ORTHO05D004849 2.1e-27 126.3 149 48.3
Thecc.08G029500 Theobroma cacao HOM05D004108 ORTHO05D004849 5.6e-25 118.2 163 47.2
Duzib093G0346 Durio zibethinus HOM05D004108 ORTHO05D004849 9.6e-25 117.5 156 44.9
PGR083G0993 Punica granatum HOM05D004108 ORTHO05D004849 1.2e-24 117.1 146 45.9
Gohir.A05G192800 Gossypium hirsutum HOM05D004108 ORTHO05D004849 2.8e-24 115.9 169 44.4
QL02p009008 Quercus lobata HOM05D004108 ORTHO05D004849 3.6e-24 115.5 163 44.8
Gohir.D05G196000 Gossypium hirsutum HOM05D004108 ORTHO05D004849 8.1e-24 114.4 169 43.8
Gorai.009G200900 Gossypium raimondii HOM05D004108 ORTHO05D004849 8.1e-24 114.4 169 43.8
Gorai.002G127100 Gossypium raimondii HOM05D004108 ORTHO05D004849 5.2e-23 111.7 150 44.7
CiPaw.15G080700 Carya illinoinensis HOM05D004108 ORTHO05D004849 8.9e-23 110.9 153 44.4
Eucgr.F01582 Eucalyptus grandis HOM05D004108 ORTHO05D004849 8.9e-23 110.9 148 42.6
MD08G1029700 Malus domestica HOM05D004108 ORTHO05D004849 8.9e-23 110.9 162 43.2
Gohir.D01G103300 Gossypium hirsutum HOM05D004108 ORTHO05D004849 1.2e-22 110.5 150 44.0
Ciclev10002766m.g Citrus clementina HOM05D004108 ORTHO05D004849 2.6e-22 109.4 150 41.3
Gohir.A01G114900 Gossypium hirsutum HOM05D004108 ORTHO05D004849 3.4e-22 109.0 147 44.2
Cfa018174 Carpinus fangiana HOM05D004108 ORTHO05D004849 9.9e-22 107.5 150 46.7
Duzib116G0345 Durio zibethinus HOM05D004108 ORTHO05D004849 9.9e-22 107.5 163 42.9
Lalb_Chr08g0245901 Lupinus albus HOM05D004108 ORTHO05D004849 4.9e-21 105.1 148 43.2
VMungo0647G0771 Vigna mungo HOM05D004108 ORTHO05D004849 4.9e-21 105.1 148 42.6
GSVIVG01009730001 Vitis vinifera HOM05D004108 ORTHO05D004849 6.4e-21 104.8 143 44.8
Rhsim06G0031200 Rhododendron simsii HOM05D004108 ORTHO05D004849 8.4e-21 104.4 148 45.3
CANSAT25G0460 Cannabis sativa HOM05D004108 ORTHO05D004849 1.9e-20 103.2 155 43.2
Glyma.17G251800 Glycine max HOM05D004108 ORTHO05D004849 2.4e-20 102.8 162 40.1
CSS0043508 Camellia sinensis var. sinensis HOM05D004108 ORTHO05D004849 3.2e-20 102.4 150 44.7
Potri.005G228600 Populus trichocarpa HOM05D004108 ORTHO05D004849 3.2e-20 102.4 149 42.3
TPR.G20143 Trifolium pratense HOM05D004108 ORTHO05D004849 3.2e-20 102.4 147 39.5
CSS0044578 Camellia sinensis var. sinensis HOM05D004108 ORTHO05D004849 5.4e-20 101.7 150 44.7
COL.COLO4_26289 Corchorus olitorius HOM05D004108 ORTHO05D004849 5.4e-20 101.7 151 43.0
Manes.18G023000 Manihot esculenta HOM05D004108 ORTHO05D004849 5.4e-20 101.7 149 38.9
Sabra05G0176500 Salix brachista HOM05D004108 ORTHO05D004849 5.4e-20 101.7 149 40.9
Glyma.14G073200 Glycine max HOM05D004108 ORTHO05D004849 7.1e-20 101.3 148 41.9
Phvul.001G013200 Phaseolus vulgaris HOM05D004108 ORTHO05D004849 7.1e-20 101.3 145 42.1
Actinidia22531 Actinidia chinensis HOM05D004108 ORTHO05D004849 9.3e-20 100.9 150 45.3
PSO675G8146 Papaver somniferum HOM05D004108 ORTHO05D004849 9.3e-20 100.9 155 40.0
CsaV3_3G045320 Cucumis sativus L. HOM05D004108 ORTHO05D004849 1.2e-19 100.5 161 39.8
Ca_13362_v3 Cicer arietinum L. HOM05D004108 ORTHO05D004849 1.6e-19 100.1 146 39.7
Gorai.009G272400 Gossypium raimondii HOM05D004108 ORTHO05D004849 1.6e-19 100.1 164 42.7
CANSAT25G1850 Cannabis sativa HOM05D004108 ORTHO05D004849 2.1e-19 99.8 154 40.3
MSTRG.22304 Avicennia marina HOM05D004108 ORTHO05D004849 2.7e-19 99.4 156 44.9
MELO3C003817.2 Cucumis melo HOM05D004108 ORTHO05D004849 2.7e-19 99.4 161 38.5
Medtr3g111970 Medicago truncatula HOM05D004108 ORTHO05D004849 2.7e-19 99.4 146 43.2
TAR381G0780 Trochodendron aralioides HOM05D004108 ORTHO05D004849 2.7e-19 99.4 127 42.5
Glyma.06G031000 Glycine max HOM05D004108 ORTHO05D004849 4.6e-19 98.6 158 40.5
SGA_v2.0_scaffold326G48731 Striga asiatica HOM05D004108 ORTHO05D004849 6.0e-19 98.2 157 40.8
Aqoxy5G01593 Aquilegia oxysepala HOM05D004108 ORTHO05D004849 7.8e-19 97.8 157 40.1
DCAR_019539 Daucus carota HOM05D001676 ORTHO05D001539 7.8e-19 97.8 147 40.1
Sc15g0007040 Simmondsia chinensis HOM05D004108 ORTHO05D004849 7.8e-19 97.8 154 39.6
Gohir.A05G258800 Gossypium hirsutum HOM05D004108 ORTHO05D004849 1.0e-18 97.4 149 43.0
Lj1g0012803 Lotus japonicus HOM05D004108 ORTHO05D004849 1.0e-18 97.4 170 39.4
Medtr1g022395 Medicago truncatula HOM05D004108 ORTHO05D004849 1.0e-18 97.4 146 41.8
PSO541G2330 Papaver somniferum HOM05D004108 ORTHO05D004849 1.0e-18 97.4 155 38.7
TWI56G1092 Tripterygium wilfordii HOM05D004108 ORTHO05D004849 1.7e-18 96.7 154 41.6
HanXRQChr05g0156841 Helianthus annuus HOM05D004108 ORTHO05D004849 2.3e-18 96.3 146 38.4
Hund26890 Selenicereus undatus HOM05D004108 ORTHO05D004849 2.3e-18 96.3 149 38.9
Hund29908 Selenicereus undatus HOM05D004108 ORTHO05D004849 2.3e-18 96.3 149 38.9
Glyma.04G030900 Glycine max HOM05D004108 ORTHO05D004849 3.0e-18 95.9 158 40.5
Gohir.D05G260600 Gossypium hirsutum HOM05D004108 ORTHO05D004849 3.0e-18 95.9 149 42.3
AUR62003937 Chenopodium quinoa HOM05D004108 ORTHO05D004849 3.9e-18 95.5 148 40.5
AUR62014478 Chenopodium quinoa HOM05D004108 ORTHO05D004849 3.9e-18 95.5 148 40.5
Psat5g012160 Pisum sativum HOM05D004108 ORTHO05D004849 3.9e-18 95.5 148 39.9
Ca_15505_v3 Cicer arietinum L. HOM05D004108 ORTHO05D004849 5.1e-18 95.1 147 39.5
MSTRG.24284 Avicennia marina HOM05D004108 ORTHO05D004849 6.6e-18 94.7 164 40.9
Atru.chr13.446 Acer truncatum HOM05D004108 ORTHO05D004849 8.7e-18 94.4 147 39.5
Nitab4.5_0002224g0100 Nicotiana tabacum HOM05D004108 ORTHO05D004849 8.7e-18 94.4 151 36.4
Psat6g008240 Pisum sativum HOM05D004108 ORTHO05D004849 8.7e-18 94.4 147 39.5
Haze_17929 Corylus avellana HOM05D004108 ORTHO05D004849 1.5e-17 93.6 132 40.9
Sed0024175 Sechium edule HOM05D004108 ORTHO05D004849 1.5e-17 93.6 132 43.9
ECA246G2053 Erigeron canadensis HOM05D004108 ORTHO05D004849 1.9e-17 93.2 151 38.4
Lj5g0010725 Lotus japonicus HOM05D004108 ORTHO05D004849 3.3e-17 92.4 147 38.8
Hma1.2p1_0203F.1_g086230 Hydrangea macrophylla HOM05D004108 ORTHO05D004849 4.3e-17 92.0 151 41.7
VMungo1309G0255 Vigna mungo HOM05D004108 ORTHO05D004849 5.6e-17 91.7 147 38.8
ClCG08G014950 Citrullus lanatus HOM05D004108 ORTHO05D004849 7.3e-17 91.3 156 39.7
ATR0568G230 Amborella trichopoda HOM05D004108 ORTHO05D004849 9.6e-17 90.9 154 34.4
MBI18_g38882_MAGBIO Magnolia biondii HOM05D004108 ORTHO05D004849 9.6e-17 90.9 155 40.0
Sabra02G0027700 Salix brachista HOM05D004108 ORTHO05D004849 9.6e-17 90.9 149 39.6
Potri.002G034500 Populus trichocarpa HOM05D004108 ORTHO05D004849 1.3e-16 90.5 148 39.2
RhsimUnG0051600 Rhododendron simsii HOM05D004108 ORTHO05D004849 1.3e-16 90.5 159 37.1
Cc10_g02670 Coffea canephora HOM05D004108 ORTHO05D004849 1.6e-16 90.1 149 40.9
Oeu007023.1 Olea europaea HOM05D004108 ORTHO05D004849 1.6e-16 90.1 152 41.4
EL10Ac1g00610 Beta vulgaris HOM05D004108 ORTHO05D004849 2.1e-16 89.7 154 38.3
CDE06G1682 Ceratophyllum demersum HOM05D004108 ORTHO05D004849 2.1e-16 89.7 153 37.9
Eucgr.F01583 Eucalyptus grandis HOM05D004108 ORTHO05D004849 2.1e-16 89.7 179 35.8
CDE02G0765 Ceratophyllum demersum HOM05D004108 ORTHO05D004849 2.8e-16 89.4 151 39.1
Rhsim07G0240700 Rhododendron simsii HOM05D004108 ORTHO05D004849 2.8e-16 89.4 159 37.1
Os03g0826800 Oryza sativa ssp. japonica HOM05D004108 ORTHO05D004849 3.6e-16 89.0 152 40.8
TPR.G12369 Trifolium pratense HOM05D004108 ORTHO05D004849 6.2e-16 88.2 175 37.7
Glyma.06G031100 Glycine max HOM05D004108 ORTHO05D004849 8.1e-16 87.8 153 39.2
Lalb_Chr14g0369381 Lupinus albus HOM05D004108 ORTHO05D004849 8.1e-16 87.8 148 39.9
Sed0010517 Sechium edule HOM05D004108 ORTHO05D004849 1.4e-15 87.0 160 36.2
CsaV3_2G028830 Cucumis sativus L. HOM05D004108 ORTHO05D004849 1.8e-15 86.7 146 40.4
Migut.N00486 Erythranthe guttata HOM05D004108 ORTHO05D004849 2.4e-15 86.3 152 38.8
MELO3C010952.2 Cucumis melo HOM05D004108 ORTHO05D004849 3.1e-15 85.9 146 42.5
Lsat_1_v5_gn_5_27881 Lactuca sativa HOM05D004108 ORTHO05D004849 3.1e-15 85.9 151 39.7
arahy.Tifrunner.gnm1.ann1.9Q97AW Arachis hypogaea HOM05D004108 ORTHO05D004849 4.0e-15 85.5 159 34.6
MBI10_g18267_MAGBIO Magnolia biondii HOM05D004108 ORTHO05D004849 6.9e-15 84.7 144 38.2
arahy.Tifrunner.gnm1.ann1.FG8SZ8 Arachis hypogaea HOM05D004108 ORTHO05D004849 1.2e-14 84.0 159 34.0
Carub.0001s1910 Capsella rubella HOM05D004108 ORTHO05D004849 1.2e-14 84.0 153 37.9
PGSC0003DMG400003688 Solanum tuberosum HOM05D004108 ORTHO05D004849 1.5e-14 83.6 152 35.5
HPP92_003110 Vanilla planifolia HOM05D004108 ORTHO05D004849 1.5e-14 83.6 152 34.2
Sopen04g034130 Solanum pennellii HOM05D004108 ORTHO05D004849 2.0e-14 83.2 151 36.4
THA.LOC104811375 Tarenaya hassleriana HOM05D004108 ORTHO05D004849 2.6e-14 82.8 146 36.3
Cpa.g.sc31.39 Carica papaya HOM05D004108 ORTHO05D004849 3.4e-14 82.4 131 40.5
CDE11G1036 Ceratophyllum demersum HOM05D004108 ORTHO05D004849 3.4e-14 82.4 149 37.6
Solyc04g080540.2 Solanum lycopersicum HOM05D004108 ORTHO05D004849 4.4e-14 82.0 151 36.4
Thhalv10009139m.g Eutrema salsugineum HOM05D004108 ORTHO05D004849 7.6e-14 81.3 153 36.6
CARHR020100 Cardamine hirsuta HOM05D004108 ORTHO05D004849 1.7e-13 80.1 153 36.6
Lsat_1_v5_gn_4_117601 Lactuca sativa HOM05D004108 ORTHO05D004849 1.7e-13 80.1 147 39.5
Phvul.009G058900 Phaseolus vulgaris HOM05D004108 ORTHO05D004849 1.7e-13 80.1 154 34.4
A06p15710 Brassica napus HOM05D004108 ORTHO05D004849 6.4e-13 78.2 153 34.6
DCAR_020978 Daucus carota HOM05D004108 ORTHO05D004849 6.4e-13 78.2 146 36.3
C05p18030 Brassica napus HOM05D004108 ORTHO05D004849 8.4e-13 77.8 149 35.6
CDE05G3574 Ceratophyllum demersum HOM05D004108 ORTHO05D004849 1.1e-12 77.4 151 38.4
Sp1g17400 Schrenkiella parvula HOM05D004108 ORTHO05D004849 1.1e-12 77.4 149 35.6
ECA232G2533 Erigeron canadensis HOM05D004108 ORTHO05D004849 1.4e-12 77.0 149 35.6
Rhsim06G0031500 Rhododendron simsii HOM05D004108 ORTHO05D004849 1.4e-12 77.0 127 37.8
AagrBONN_evm.TU.Sc2ySwM_344.1816 Anthoceros agrestis HOM05D004108 ORTHO05D004849 1.9e-12 76.6 172 34.3
Aqoxy3G01079 Aquilegia oxysepala HOM05D004108 ORTHO05D004849 1.9e-12 76.6 147 35.4
BcaC05g25839 Brassica carinata HOM05D004108 ORTHO05D004849 1.9e-12 76.6 153 34.6
BolC5t30510H Brassica oleracea HOM05D004108 ORTHO05D004849 1.9e-12 76.6 153 34.6
BraA06t24680Z Brassica rapa HOM05D004108 ORTHO05D004849 1.9e-12 76.6 149 34.2
Dinv36099 Davidia involucrata HOM05D004108 ORTHO05D004849 4.2e-12 75.5 129 40.3
AT1G19530 Arabidopsis thaliana HOM05D004108 ORTHO05D004849 5.4e-12 75.1 153 34.6
SEGI_15325 Sequoiadendron giganteum HOM05D004108 ORTHO05D004849 1.6e-11 73.6 164 36.0
Aqoxy3G01077 Aquilegia oxysepala HOM05D004108 ORTHO05D004849 2.7e-11 72.8 146 37.0
SEGI_02312 Sequoiadendron giganteum HOM05D004108 ORTHO05D004849 2.7e-11 72.8 155 34.8
HPP92_010562 Vanilla planifolia HOM05D004108 ORTHO05D004849 3.5e-11 72.4 146 37.0
Mapoly0085s0006 Marchantia polymorpha HOM05D004108 ORTHO05D004849 4.6e-11 72.0 153 32.7
BcaB07g31980 Brassica carinata HOM05D004108 ORTHO05D004849 7.9e-11 71.2 153 34.0
unitig_899.g15617 Utricularia gibba HOM05D004108 ORTHO05D004849 1.3e-10 70.5 152 31.6
Mapoly0203s0009 Marchantia polymorpha HOM05D004108 ORTHO05D004849 3.9e-10 68.9 145 33.1
AL1G32280 Arabidopsis lyrata HOM05D004108 ORTHO05D004849 5.1e-10 68.6 153 32.7
SEGI_30411 Sequoiadendron giganteum HOM05D004108 ORTHO05D004849 1.9e-09 66.6 158 36.7
SMO348G0043 Selaginella moellendorffii HOM05D004108 ORTHO05D004849 2.5e-09 66.2 165 32.1
Mapoly0212s0007 Marchantia polymorpha HOM05D004108 ORTHO05D004849 3.3e-09 65.9 158 29.7
Mapoly0212s0009 Marchantia polymorpha HOM05D004108 ORTHO05D004849 3.3e-09 65.9 147 32.7
Mapoly0212s0008 Marchantia polymorpha HOM05D004108 ORTHO05D004849 5.6e-09 65.1 164 30.5
Prupe.2G019400 Prunus persica HOM05D004108 ORTHO05D004849 5.6e-09 65.1 40 70.0
Aa31LG7G4180 Aethionema arabicum HOM05D004108 ORTHO05D004849 9.6e-09 64.3 146 33.6
Actinidia38001 Actinidia chinensis HOM05D004108 ORTHO05D004849 2.1e-08 63.2 60 50.0
Mapoly0085s0007 Marchantia polymorpha HOM05D004108 ORTHO05D004849 2.1e-08 63.2 150 28.7
HanXRQChr16g0501561 Helianthus annuus HOM05D004108 ORTHO05D004849 3.6e-08 62.4 146 34.2
Nitab4.5_0001759g0080 Nicotiana tabacum HOM05D004108 ORTHO05D004849 3.6e-08 62.4 72 44.4
Pp3c20_22930 Physcomitrium patens HOM05D004108 ORTHO05D004849 3.6e-08 62.4 128 33.6
Pp3c16_7660 Physcomitrium patens HOM05D004108 ORTHO05D004849 4.8e-08 62.0 147 32.7
Mapoly0037s0069 Marchantia polymorpha HOM05D004108 ORTHO05D004849 8.1e-08 61.2 147 30.6
Hma1.2p1_0203F.1_g086240 Hydrangea macrophylla HOM05D004108 ORTHO05D004849 1.1e-07 60.8 100 40.0
arahy.Tifrunner.gnm1.ann1.KZM1SZ Arachis hypogaea HOM05D004108 ORTHO05D004849 1.8e-07 60.1 114 36.8
arahy.Tifrunner.gnm1.ann1.RL39CN Arachis hypogaea HOM05D004108 ORTHO05D004849 1.8e-07 60.1 114 36.8
Phvul.009G058800 Phaseolus vulgaris HOM05D004108 ORTHO05D004849 2.4e-07 59.7 146 30.1
ClCG05G018840 Citrullus lanatus HOM05D004108 ORTHO05D004849 3.1e-07 59.3 93 39.8
Mapoly0087s0045 Marchantia polymorpha HOM05D004108 ORTHO05D004849 4.0e-07 58.9 147 27.9
Sc02g0005700 Simmondsia chinensis HOM05D004108 ORTHO05D004849 6.9e-07 58.2 77 41.6
Actinidia29817 Actinidia chinensis HOM05D004108 ORTHO05D004849 1.5e-06 57.0 40 60.0
Mapoly0087s0044 Marchantia polymorpha HOM05D004108 ORTHO05D004849 2.0e-06 56.6 160 26.2
Actinidia30825 Actinidia chinensis HOM05D004108 ORTHO05D004849 2.6e-06 56.2 90 43.3
PGSC0003DMG400005376 Solanum tuberosum HOM05D004108 ORTHO05D004849 3.4e-06 55.8 42 64.3
Nn2g14293 Nelumbo nucifera HOM05D004108 ORTHO05D004849 5.8e-06 55.1 127 30.7
CSS0033768 Camellia sinensis var. sinensis HOM05D004108 ORTHO05D004849 7.6e-06 54.7 56 50.0


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