Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN27G1027 Fragaria x ananassa HOM05D003427 ORTHO05D003927 3.8e-128 461.5 222 100.0
FAN15G0165 Fragaria x ananassa HOM05D003427 ORTHO05D003927 5.7e-108 394.4 197 98.0
FvH4_2g26430 Fragaria vesca HOM05D003427 ORTHO05D003927 5.9e-105 384.4 197 94.9
FAN24G2254 Fragaria x ananassa HOM05D003427 ORTHO05D003927 5.9e-105 384.4 197 94.9
RcHm_v2.0_Chr6g0295111 Rosa chinensis HOM05D003427 ORTHO05D003927 2.9e-80 302.4 210 77.1
Prupe.1G502900 Prunus persica HOM05D003427 ORTHO05D003927 2.1e-62 243.0 210 66.7
RcHm_v2.0_Chr6g0275211 Rosa chinensis HOM05D003427 ORTHO05D003927 3.0e-61 239.2 211 62.1
FvH4_2g13600 Fragaria vesca HOM05D003427 ORTHO05D003927 8.8e-61 237.7 211 62.1
MD15G1354500 Malus domestica HOM05D003427 ORTHO05D003927 7.5e-60 234.6 206 63.6
FAN15G0544 Fragaria x ananassa HOM05D003427 ORTHO05D003927 7.0e-58 228.0 225 58.7
FAN24G2318 Fragaria x ananassa HOM05D003427 ORTHO05D003927 1.7e-56 223.4 226 58.0
QL04p060321 Quercus lobata HOM05D003427 ORTHO05D003927 4.6e-49 198.7 213 54.5
QL07p045468 Quercus lobata HOM05D003427 ORTHO05D003927 5.9e-49 198.4 213 54.0
Atru.chr13.1349 Acer truncatum HOM05D003427 ORTHO05D003927 3.0e-48 196.1 217 54.4
Atru.chr13.1391 Acer truncatum HOM05D003427 ORTHO05D003927 3.0e-48 196.1 217 54.4
FAN20G1269 Fragaria x ananassa HOM05D031329 ORTHO05D029712 1.5e-47 193.7 95 97.9
MD05G1028200 Malus domestica HOM05D003427 ORTHO05D003927 1.2e-46 190.7 210 55.2
CANSAT56G1611 Cannabis sativa HOM05D003427 ORTHO05D003927 2.3e-45 186.4 214 53.3
Dinv27352 Davidia involucrata HOM05D003427 ORTHO05D003927 3.1e-45 186.0 211 53.6
Actinidia23060 Actinidia chinensis HOM05D003427 ORTHO05D003927 8.9e-45 184.5 211 51.7
Cpa.g.sc36.19 Carica papaya HOM05D003427 ORTHO05D003927 2.6e-44 183.0 190 56.8
Haze_00493 Corylus avellana HOM05D003427 ORTHO05D003927 2.6e-44 183.0 230 50.9
GSVIVG01008915001 Vitis vinifera HOM05D003427 ORTHO05D003927 2.6e-44 183.0 188 53.2
CiPaw.05G226400 Carya illinoinensis HOM05D003427 ORTHO05D003927 3.4e-44 182.6 216 52.8
CANSAT56G1577 Cannabis sativa HOM05D003427 ORTHO05D003927 4.9e-43 178.7 214 51.4
Sc01g0001400 Simmondsia chinensis HOM05D003427 ORTHO05D003927 1.9e-42 176.8 219 50.7
TWI12G1192 Tripterygium wilfordii HOM05D003427 ORTHO05D003927 1.9e-42 176.8 175 58.9
Ciclev10001037m.g Citrus clementina HOM05D003427 ORTHO05D003927 2.4e-42 176.4 187 56.7
CSS0043512 Camellia sinensis var. sinensis HOM05D003427 ORTHO05D003927 1.6e-41 173.7 177 54.8
CSS0048113 Camellia sinensis var. sinensis HOM05D003427 ORTHO05D003927 1.6e-41 173.7 177 54.8
Eucgr.F04372 Eucalyptus grandis HOM05D003427 ORTHO05D003927 2.7e-41 172.9 222 47.7
Potri.005G174600 Populus trichocarpa HOM05D003427 ORTHO05D003927 2.7e-41 172.9 179 55.9
CSS0044236 Camellia sinensis var. sinensis HOM05D003427 ORTHO05D003927 2.3e-40 169.9 177 54.8
ClCG03G009520 Citrullus lanatus HOM05D003427 ORTHO05D003927 4.3e-39 165.6 177 52.5
Thecc.08G120400 Theobroma cacao HOM05D003427 ORTHO05D003927 9.5e-39 164.5 204 52.9
MELO3C003029.2 Cucumis melo HOM05D003427 ORTHO05D003927 3.6e-38 162.5 192 52.1
CsaV3_5G023150 Cucumis sativus L. HOM05D003427 ORTHO05D003927 3.6e-38 162.5 192 51.6
arahy.Tifrunner.gnm1.ann1.X2WTDQ Arachis hypogaea HOM05D003427 ORTHO05D003927 6.2e-38 161.8 197 49.2
BraA04t18633Z Brassica rapa HOM05D003427 ORTHO05D003927 8.1e-38 161.4 200 53.0
EL10Ac1g00015 Beta vulgaris HOM05D003427 ORTHO05D003927 1.4e-37 160.6 182 53.8
Lj1g0010808 Lotus japonicus HOM05D003427 ORTHO05D003927 1.4e-37 160.6 174 52.9
arahy.Tifrunner.gnm1.ann1.81342Q Arachis hypogaea HOM05D003427 ORTHO05D003927 1.8e-37 160.2 197 48.7
Gohir.D06G043200 Gossypium hirsutum HOM05D003427 ORTHO05D003927 3.1e-37 159.5 174 51.7
Gohir.A06G042200 Gossypium hirsutum HOM05D003427 ORTHO05D003927 4.0e-37 159.1 206 49.0
VMungo1309G2531 Vigna mungo HOM05D003427 ORTHO05D003927 5.2e-37 158.7 164 53.7
Duzib093G1044 Durio zibethinus HOM05D003427 ORTHO05D003927 6.8e-37 158.3 201 50.7
TWI56G0570 Tripterygium wilfordii HOM05D003427 ORTHO05D003927 6.8e-37 158.3 133 62.4
SalBow7G0329 Salvia bowleyana HOM05D003427 ORTHO05D003927 8.9e-37 157.9 197 48.7
TAR381G1219 Trochodendron aralioides HOM05D003427 ORTHO05D003927 8.9e-37 157.9 194 49.5
Ca_15210_v3 Cicer arietinum L. HOM05D003427 ORTHO05D003927 2.0e-36 156.8 163 53.4
SalBow7G2208 Salvia bowleyana HOM05D003427 ORTHO05D003927 2.6e-36 156.4 197 48.7
BolC4t28415H Brassica oleracea HOM05D003427 ORTHO05D003927 4.4e-36 155.6 194 51.5
Gorai.010G048400 Gossypium raimondii HOM05D003427 ORTHO05D003927 4.4e-36 155.6 174 51.1
Phvul.009G122400 Phaseolus vulgaris HOM05D003427 ORTHO05D003927 4.4e-36 155.6 171 53.2
Sp4g23950 Schrenkiella parvula HOM05D003427 ORTHO05D003927 9.8e-36 154.5 202 51.0
THA.LOC104800187 Tarenaya hassleriana HOM05D003427 ORTHO05D003927 1.3e-35 154.1 208 49.5
Aqoxy1G02472 Aquilegia oxysepala HOM05D003427 ORTHO05D003927 1.7e-35 153.7 190 50.0
AL4G40010 Arabidopsis lyrata HOM05D003427 ORTHO05D003927 1.7e-35 153.7 203 50.7
Cfa015981 Carpinus fangiana HOM05D003427 ORTHO05D003927 1.7e-35 153.7 213 47.9
Oeu050892.2 Olea europaea HOM05D003427 ORTHO05D003927 2.2e-35 153.3 169 49.1
C04p69170 Brassica napus HOM05D003427 ORTHO05D003927 2.9e-35 152.9 198 50.5
Medtr3g072830 Medicago truncatula HOM05D003427 ORTHO05D003927 2.9e-35 152.9 170 51.8
Duzib116G0521 Durio zibethinus HOM05D003427 ORTHO05D003927 4.9e-35 152.1 189 49.7
BcaB06g29198 Brassica carinata HOM05D003427 ORTHO05D003927 6.4e-35 151.8 197 49.2
AT2G41705 Arabidopsis thaliana HOM05D003427 ORTHO05D003927 8.3e-35 151.4 199 48.7
Hund16834 Selenicereus undatus HOM05D003427 ORTHO05D003927 8.3e-35 151.4 172 49.4
TPR.G19881 Trifolium pratense HOM05D003427 ORTHO05D003927 8.3e-35 151.4 167 53.3
A04p31750 Brassica napus HOM05D003427 ORTHO05D003927 1.9e-34 150.2 202 50.5
CARHR136800 Cardamine hirsuta HOM05D003427 ORTHO05D003927 1.9e-34 150.2 207 51.2
Aa31LG1G23720 Aethionema arabicum HOM05D003427 ORTHO05D003927 2.4e-34 149.8 183 50.8
Carub.0004s2398 Capsella rubella HOM05D003427 ORTHO05D003927 2.4e-34 149.8 203 49.8
Ah.05g172200 Amaranthus hybridus HOM05D003427 ORTHO05D003927 3.2e-34 149.4 181 49.7
Cc06_g13570 Coffea canephora HOM05D003427 ORTHO05D003927 3.2e-34 149.4 209 45.5
Hund16838 Selenicereus undatus HOM05D003427 ORTHO05D003927 5.4e-34 148.7 166 50.6
COL.COLO4_38335 Corchorus olitorius HOM05D003427 ORTHO05D003927 1.2e-33 147.5 178 51.7
VMungo1215G1715 Vigna mungo HOM05D003427 ORTHO05D003927 1.2e-33 147.5 183 48.6
MSTRG.25396 Avicennia marina HOM05D003427 ORTHO05D003927 2.7e-33 146.4 206 46.1
PSO384G4155 Papaver somniferum HOM05D003427 ORTHO05D003927 7.8e-33 144.8 215 44.2
A05p02420 Brassica napus HOM05D003427 ORTHO05D003927 1.0e-32 144.4 182 51.6
BraA05t19236Z Brassica rapa HOM05D003427 ORTHO05D003927 1.0e-32 144.4 182 51.6
ECA233G4311 Erigeron canadensis HOM05D001171 ORTHO05D006126 1.3e-32 144.1 193 47.7
Lalb_Chr11g0065761 Lupinus albus HOM05D003427 ORTHO05D003927 1.7e-32 143.7 185 51.4
Lsat_1_v5_gn_3_20261 Lactuca sativa HOM05D003427 ORTHO05D003927 3.0e-32 142.9 200 43.0
MSTRG.1469 Avicennia marina HOM05D003427 ORTHO05D003927 5.1e-32 142.1 202 44.6
PGSC0003DMG400012073 Solanum tuberosum HOM05D003427 ORTHO05D003927 6.6e-32 141.7 159 52.8
Phvul.003G010800 Phaseolus vulgaris HOM05D003427 ORTHO05D003927 8.6e-32 141.4 157 52.9
Thhalv10016628m.g Eutrema salsugineum HOM05D003427 ORTHO05D003927 1.5e-31 140.6 207 49.8
Sopen11g008180 Solanum pennellii HOM05D003427 ORTHO05D003927 1.5e-31 140.6 161 52.2
C04p02870 Brassica napus HOM05D003427 ORTHO05D003927 1.9e-31 140.2 202 47.5
Migut.C01159 Erythranthe guttata HOM05D003427 ORTHO05D003927 3.3e-31 139.4 163 50.3
BcaNung06817 Brassica carinata HOM05D003427 ORTHO05D003927 4.3e-31 139.0 164 51.8
ECA246G0604 Erigeron canadensis HOM05D003427 ORTHO05D003927 4.3e-31 139.0 203 45.3
Lalb_Chr23g0270941 Lupinus albus HOM05D003427 ORTHO05D003927 4.3e-31 139.0 99 69.7
BcaC02g12787 Brassica carinata HOM05D003427 ORTHO05D003927 5.6e-31 138.7 182 50.0
BolC4t21927H Brassica oleracea HOM05D003427 ORTHO05D003927 5.6e-31 138.7 182 50.0
Potri.002G086800 Populus trichocarpa HOM05D003427 ORTHO05D003927 5.6e-31 138.7 118 65.3
CAN.G134.189 Capsicum annuum HOM05D003427 ORTHO05D003927 2.1e-30 136.7 169 49.1
Rhsim06G0106600 Rhododendron simsii HOM05D003427 ORTHO05D003927 4.7e-30 135.6 97 67.0
TPR.G39483 Trifolium pratense HOM05D003427 ORTHO05D003927 4.7e-30 135.6 196 45.4
Glyma.04G252000 Glycine max HOM05D003427 ORTHO05D003927 6.2e-30 135.2 183 48.1
Glyma.06G110500 Glycine max HOM05D003427 ORTHO05D003927 6.2e-30 135.2 185 49.2
Solyc11g013120.2 Solanum lycopersicum HOM05D003427 ORTHO05D003927 6.2e-30 135.2 161 50.3
BcaB06g29200 Brassica carinata HOM05D003427 ORTHO05D003927 5.2e-29 132.1 91 73.6
HanXRQChr17g0537311 Helianthus annuus HOM05D003427 ORTHO05D003927 6.8e-29 131.7 165 46.1
Psat5g133440 Pisum sativum HOM05D003427 ORTHO05D003927 1.5e-28 130.6 82 75.6
SGA_v2.0_scaffold24G10480 Striga asiatica HOM05D003427 ORTHO05D003927 2.6e-28 129.8 164 47.0
Medtr3g072840 Medicago truncatula HOM05D003427 ORTHO05D003927 4.4e-28 129.0 175 46.9
Nitab4.5_0006276g0030 Nicotiana tabacum HOM05D003427 ORTHO05D003927 4.4e-28 129.0 187 46.0
SGA_v2.0_scaffold52G18992 Striga asiatica HOM05D003427 ORTHO05D003927 5.8e-28 128.6 191 45.5
Manes.18G074712 Manihot esculenta HOM05D003427 ORTHO05D003927 7.6e-28 128.3 198 44.4
vmacro20081 Vaccinium macrocarpon HOM05D003427 ORTHO05D003927 9.9e-28 127.9 110 58.2
Hma1.2p1_0009F.1_g006270 Hydrangea macrophylla HOM05D003427 ORTHO05D003927 2.2e-27 126.7 77 77.9
Nitab4.5_0005357g0010 Nicotiana tabacum HOM05D003427 ORTHO05D003927 2.2e-27 126.7 163 47.9
AUR62036406 Chenopodium quinoa HOM05D003427 ORTHO05D003927 3.8e-27 125.9 218 40.4
TWI74G0994 Tripterygium wilfordii HOM05D003427 ORTHO05D003927 6.4e-27 125.2 84 72.6
EL10Ac7g18243 Beta vulgaris HOM05D003427 ORTHO05D003927 1.1e-26 124.4 87 67.8
Hund27042 Selenicereus undatus HOM05D003427 ORTHO05D003927 4.1e-26 122.5 103 58.3
Medtr3g007470 Medicago truncatula HOM05D003427 ORTHO05D003927 5.4e-26 122.1 119 57.1
Lj3g0027376 Lotus japonicus HOM05D003427 ORTHO05D003927 1.3e-24 117.5 84 67.9
TAR381G1345 Trochodendron aralioides HOM05D003427 ORTHO05D003927 1.3e-24 117.5 170 44.7
Sed0011022 Sechium edule HOM05D003427 ORTHO05D003927 1.7e-24 117.1 83 68.7
MD15G1354300 Malus domestica HOM05D003427 ORTHO05D003927 2.3e-24 116.7 67 83.6
Ca_14080_v3 Cicer arietinum L. HOM05D003427 ORTHO05D003927 3.0e-24 116.3 83 68.7
vmacro05626 Vaccinium macrocarpon HOM05D003427 ORTHO05D003927 8.6e-24 114.8 85 67.1
HPP92_012116 Vanilla planifolia HOM05D003427 ORTHO05D003927 1.2e-22 110.9 108 51.9
Psat5g229600 Pisum sativum HOM05D003427 ORTHO05D003927 1.6e-22 110.5 83 65.1
Os10g0567000 Oryza sativa ssp. japonica HOM05D003427 ORTHO05D003927 2.8e-22 109.8 192 38.0
Zm00001eb390680 Zea mays HOM05D003427 ORTHO05D003927 2.8e-22 109.8 110 52.7
MD08G1168900 Malus domestica HOM05D003427 ORTHO05D003927 6.9e-21 105.1 114 50.9
Sabra05G0131500 Salix brachista HOM05D003427 ORTHO05D003927 6.9e-21 105.1 299 33.1
Glyma.06G110450 Glycine max HOM05D003427 ORTHO05D003927 1.2e-20 104.4 67 76.1
CDE01G0736 Ceratophyllum demersum HOM05D003427 ORTHO05D003927 1.5e-20 104.0 68 73.5
SEGI_27083 Sequoiadendron giganteum HOM05D003427 ORTHO05D003927 9.9e-20 101.3 181 37.6
vmacro12550 Vaccinium macrocarpon HOM05D003427 ORTHO05D003927 1.3e-19 100.9 61 75.4
SEGI_02547 Sequoiadendron giganteum HOM05D003427 ORTHO05D003927 6.4e-19 98.6 217 36.4
SEGI_33607 Sequoiadendron giganteum HOM05D003427 ORTHO05D003927 8.4e-19 98.2 72 62.5
AagrBONN_evm.TU.Sc2ySwM_117.415 Anthoceros agrestis HOM05D003427 ORTHO05D003927 1.1e-18 97.8 80 60.0
Mapoly0005s0025 Marchantia polymorpha HOM05D003427 ORTHO05D003927 1.9e-18 97.1 81 54.3
AUR62023631 Chenopodium quinoa HOM05D003427 ORTHO05D003927 4.2e-18 95.9 216 36.6
AUR62004716 Chenopodium quinoa HOM05D003427 ORTHO05D003927 5.4e-18 95.5 196 36.7
Nn5g28144 Nelumbo nucifera HOM05D003427 ORTHO05D003927 5.4e-18 95.5 198 35.4
SEGI_06352 Sequoiadendron giganteum HOM05D003427 ORTHO05D003927 5.4e-18 95.5 80 55.0
AUR62036452 Chenopodium quinoa HOM05D003427 ORTHO05D003927 7.1e-18 95.1 206 36.4
Sabra05G0131700 Salix brachista HOM05D003427 ORTHO05D003927 1.6e-17 94.0 213 35.7
TPR.G25497 Trifolium pratense HOM05D003427 ORTHO05D003927 1.0e-16 91.3 61 72.1
MD05G1028400 Malus domestica HOM05D003427 ORTHO05D003927 1.3e-16 90.9 206 35.4
SEGI_19823 Sequoiadendron giganteum HOM05D003427 ORTHO05D003927 4.3e-15 85.9 112 43.8
Pp3c6_15270 Physcomitrium patens HOM05D003427 ORTHO05D003927 9.6e-15 84.7 115 45.2
Peaxi162Scf00402g00076 Petunia axillaris HOM05D003427 ORTHO05D003927 4.8e-14 82.4 197 35.5
Pp3c27_680 Physcomitrium patens HOM05D003427 ORTHO05D003927 2.4e-13 80.1 82 48.8
MD08G1168800 Malus domestica HOM05D003427 ORTHO05D003927 1.2e-12 77.8 81 55.6
Aqoxy1G02473 Aquilegia oxysepala HOM05D003427 ORTHO05D003927 1.3e-11 74.3 47 76.6
CiPaw.05G226300 Carya illinoinensis HOM05D003427 ORTHO05D003927 1.3e-11 74.3 178 34.3
SEGI_25864 Sequoiadendron giganteum HOM05D003427 ORTHO05D003927 2.9e-11 73.2 62 56.5
unitig_748.g7679 Utricularia gibba HOM05D003427 ORTHO05D003927 6.4e-11 72.0 99 43.4
RcHm_v2.0_Chr5g0059171 Rosa chinensis HOM05D003427 ORTHO05D003927 1.9e-10 70.5 42 78.6
MD08G1170500 Malus domestica HOM05D003427 ORTHO05D003927 1.6e-09 67.4 46 69.6
AagrBONN_evm.TU.Sc2ySwM_344.5028 Anthoceros agrestis HOM05D003427 ORTHO05D003927 6.0e-09 65.5 55 60.0
ATR0807G044 Amborella trichopoda HOM05D003427 ORTHO05D003927 3.0e-08 63.2 56 55.4
Rhsim10G0043500 Rhododendron simsii HOM05D003427 ORTHO05D003927 1.9e-07 60.5 115 38.3


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