Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN27G0716 Fragaria x ananassa HOM05D007054 ORTHO05D008888 1.4e-159 566.2 279 100.0
FAN15G2151 Fragaria x ananassa HOM05D007054 ORTHO05D008888 1.2e-115 420.2 233 91.8
FvH4_2g07010 Fragaria vesca HOM05D007054 ORTHO05D008888 7.8e-115 417.5 231 90.0
FAN24G1908 Fragaria x ananassa HOM05D007054 ORTHO05D008888 5.6e-105 384.8 279 73.5
RcHm_v2.0_Chr6g0259351 Rosa chinensis HOM05D007054 ORTHO05D008888 5.6e-105 384.8 232 82.8
Prupe.8G115700 Prunus persica HOM05D007054 ORTHO05D008888 6.5e-85 318.2 231 71.0
MD00G1050600 Malus domestica HOM05D007054 ORTHO05D008888 3.1e-79 299.3 231 65.4
Manes.15G143900 Manihot esculenta HOM05D007054 ORTHO05D008888 6.9e-71 271.6 231 60.2
Cfa005418 Carpinus fangiana HOM05D007054 ORTHO05D008888 4.5e-70 268.9 232 61.6
Haze_01879 Corylus avellana HOM05D007054 ORTHO05D008888 7.7e-70 268.1 231 60.6
CiPaw.05G055500 Carya illinoinensis HOM05D007054 ORTHO05D008888 1.3e-69 267.3 231 60.6
QL11p038609 Quercus lobata HOM05D007054 ORTHO05D008888 2.5e-68 263.1 232 59.5
Sabra04G0096600 Salix brachista HOM05D007054 ORTHO05D008888 4.7e-67 258.8 233 58.8
Dinv42118 Davidia involucrata HOM05D007054 ORTHO05D008888 2.3e-66 256.5 224 58.9
Potri.004G145600 Populus trichocarpa HOM05D007054 ORTHO05D008888 2.0e-65 253.4 231 58.4
Duzib132G1179 Durio zibethinus HOM05D007054 ORTHO05D008888 7.4e-65 251.5 235 57.0
ClCG02G005650 Citrullus lanatus HOM05D007054 ORTHO05D008888 1.4e-63 247.3 227 56.4
Hma1.2p1_1543F.1_g289790 Hydrangea macrophylla HOM05D007054 ORTHO05D008888 1.4e-63 247.3 232 54.3
Atru.chr5.2831 Acer truncatum HOM05D007054 ORTHO05D008888 2.4e-63 246.5 235 55.7
Thecc.02G095100 Theobroma cacao HOM05D007054 ORTHO05D008888 7.0e-63 245.0 233 55.4
Ciclev10029145m.g Citrus clementina HOM05D007054 ORTHO05D008888 1.2e-62 244.2 230 56.1
PGR142G2758 Punica granatum HOM05D007054 ORTHO05D008888 1.2e-62 244.2 167 67.7
MELO3C018427.2 Cucumis melo HOM05D007054 ORTHO05D008888 4.5e-62 242.3 224 56.2
Gohir.D12G026100 Gossypium hirsutum HOM05D007054 ORTHO05D008888 5.9e-62 241.9 235 54.0
CSS0047307 Camellia sinensis var. sinensis HOM05D007054 ORTHO05D008888 7.7e-62 241.5 177 63.8
Gorai.008G026400 Gossypium raimondii HOM05D007054 ORTHO05D008888 1.0e-61 241.1 235 54.0
TAR625G1358 Trochodendron aralioides HOM05D007054 ORTHO05D008888 1.3e-61 240.7 233 55.4
Phvul.003G012100 Phaseolus vulgaris HOM05D007054 ORTHO05D008888 1.7e-61 240.4 235 56.2
TAR381G0282 Trochodendron aralioides HOM05D007054 ORTHO05D008888 3.8e-61 239.2 233 53.6
Gohir.A12G026500 Gossypium hirsutum HOM05D007054 ORTHO05D008888 5.0e-61 238.8 235 54.0
TWI79G0983 Tripterygium wilfordii HOM05D007054 ORTHO05D008888 2.5e-60 236.5 231 53.2
Glyma.20G009500 Glycine max HOM05D007054 ORTHO05D008888 1.6e-59 233.8 228 55.7
Ca_12472_v3 Cicer arietinum L. HOM05D007054 ORTHO05D008888 2.1e-59 233.4 188 60.6
GSVIVG01031807001 Vitis vinifera HOM05D007054 ORTHO05D008888 3.6e-59 232.6 188 60.6
CsaV3_7G008860 Cucumis sativus L. HOM05D007054 ORTHO05D008888 3.0e-58 229.6 224 55.4
Lalb_Chr01g0013331 Lupinus albus HOM05D007054 ORTHO05D008888 3.0e-58 229.6 213 54.9
Glyma.07G179400 Glycine max HOM05D007054 ORTHO05D008888 8.8e-58 228.0 227 54.6
COL.COLO4_11726 Corchorus olitorius HOM05D005562 ORTHO05D007785 2.6e-57 226.5 189 57.1
Lj2g0019135 Lotus japonicus HOM05D007054 ORTHO05D008888 3.3e-57 226.1 187 60.4
CANSAT25G2549 Cannabis sativa HOM05D007054 ORTHO05D008888 7.5e-57 224.9 184 64.7
Cc02_g18390 Coffea canephora HOM05D007054 ORTHO05D008888 7.5e-57 224.9 172 59.9
FvH4_2g06990 Fragaria vesca HOM05D007054 ORTHO05D008888 7.5e-57 224.9 231 55.0
THA.LOC104798802 Tarenaya hassleriana HOM05D007054 ORTHO05D008888 2.2e-56 223.4 153 64.7
MSTRG.5374 Avicennia marina HOM05D007054 ORTHO05D008888 2.4e-55 219.9 169 60.4
FAN24G0450 Fragaria x ananassa HOM05D007054 ORTHO05D008888 3.1e-55 219.5 127 85.0
Medtr1g034050 Medicago truncatula HOM05D007054 ORTHO05D008888 5.3e-55 218.8 167 62.9
Oeu057672.1 Olea europaea HOM05D007054 ORTHO05D008888 7.0e-55 218.4 151 64.2
Psat6g096080 Pisum sativum HOM05D007054 ORTHO05D008888 1.6e-54 217.2 224 51.8
Aa31LG8G5880 Aethionema arabicum HOM05D007054 ORTHO05D008888 4.5e-54 215.7 153 64.7
arahy.Tifrunner.gnm1.ann1.M7JB84 Arachis hypogaea HOM05D007054 ORTHO05D008888 5.9e-54 215.3 160 65.6
Peaxi162Scf00016g01532 Petunia axillaris HOM05D007054 ORTHO05D008888 7.7e-54 214.9 217 49.8
arahy.Tifrunner.gnm1.ann1.LAP5IF Arachis hypogaea HOM05D007054 ORTHO05D008888 1.0e-53 214.5 160 65.6
MBI16_g08580_MAGBIO Magnolia biondii HOM05D007054 ORTHO05D008888 1.7e-53 213.8 162 59.9
EL10Ac6g14668 Beta vulgaris HOM05D007054 ORTHO05D008888 3.8e-53 212.6 178 53.9
Sc26g0004390 Simmondsia chinensis HOM05D007054 ORTHO05D008888 3.8e-53 212.6 158 64.6
TPR.G11147 Trifolium pratense HOM05D007054 ORTHO05D008888 5.0e-53 212.2 187 56.7
Nitab4.5_0001401g0040 Nicotiana tabacum HOM05D007054 ORTHO05D008888 6.5e-53 211.8 159 62.3
Oeu021925.1 Olea europaea HOM05D007054 ORTHO05D008888 8.5e-53 211.5 155 60.0
SalBow3G3466 Salvia bowleyana HOM05D007054 ORTHO05D008888 8.5e-53 211.5 169 56.2
Ah.01g002690 Amaranthus hybridus HOM05D007054 ORTHO05D008888 1.5e-52 210.7 219 47.9
Solyc01g108650.3 Solanum lycopersicum HOM05D007054 ORTHO05D008888 1.9e-52 210.3 159 61.0
Sopen01g050870 Solanum pennellii HOM05D007054 ORTHO05D008888 1.9e-52 210.3 159 61.0
PGSC0003DMG400025902 Solanum tuberosum HOM05D007054 ORTHO05D008888 3.2e-52 209.5 159 61.0
Nitab4.5_0003726g0060 Nicotiana tabacum HOM05D007054 ORTHO05D008888 7.2e-52 208.4 159 60.4
Migut.N01207 Erythranthe guttata HOM05D007054 ORTHO05D008888 1.2e-51 207.6 167 58.1
CAN.G322.40 Capsicum annuum HOM05D007054 ORTHO05D008888 2.1e-51 206.8 159 60.4
HanXRQChr12g0374541 Helianthus annuus HOM05D007054 ORTHO05D008888 3.6e-51 206.1 156 60.9
ECA234G0688 Erigeron canadensis HOM05D007054 ORTHO05D008888 6.1e-51 205.3 170 56.5
SGA_v2.0_scaffold9G04688 Striga asiatica HOM05D007054 ORTHO05D008888 1.4e-50 204.1 170 57.1
AT1G49510 Arabidopsis thaliana HOM05D007054 ORTHO05D008888 8.8e-50 201.4 161 57.8
AL1G56860 Arabidopsis lyrata HOM05D007054 ORTHO05D008888 1.2e-49 201.1 153 59.5
Lj9C361T14 Lonicera japonica HOM05D007054 ORTHO05D008888 1.2e-49 201.1 150 61.3
AUR62003054 Chenopodium quinoa HOM05D007054 ORTHO05D008888 2.0e-49 200.3 168 54.8
AUR62007867 Chenopodium quinoa HOM05D007054 ORTHO05D008888 5.7e-49 198.7 168 54.2
Carub.0001s3870 Capsella rubella HOM05D007054 ORTHO05D008888 7.5e-49 198.4 160 56.9
CDE02G0602 Ceratophyllum demersum HOM05D007054 ORTHO05D008888 7.5e-49 198.4 162 59.9
PSO675G3773 Papaver somniferum HOM05D007054 ORTHO05D008888 1.3e-48 197.6 172 51.7
Aa31LG10G4480 Aethionema arabicum HOM05D007054 ORTHO05D008888 1.7e-48 197.2 189 48.7
A05p20580 Brassica napus HOM05D007054 ORTHO05D008888 2.8e-48 196.4 152 58.6
BraA05t20968Z Brassica rapa HOM05D007054 ORTHO05D008888 2.8e-48 196.4 152 58.6
PSO541G2621 Papaver somniferum HOM05D007054 ORTHO05D008888 3.7e-48 196.1 172 51.2
Sp1g36370 Schrenkiella parvula HOM05D007054 ORTHO05D008888 8.3e-48 194.9 152 55.9
Lsat_1_v5_gn_5_117740 Lactuca sativa HOM05D007054 ORTHO05D008888 1.1e-47 194.5 151 58.9
ATR0767G176 Amborella trichopoda HOM05D007054 ORTHO05D008888 1.4e-47 194.1 161 55.3
CARHR039530 Cardamine hirsuta HOM05D007054 ORTHO05D008888 2.4e-47 193.4 152 56.6
BcaC05g27487 Brassica carinata HOM05D007054 ORTHO05D008888 3.1e-47 193.0 185 50.8
C05p34530 Brassica napus HOM05D007054 ORTHO05D008888 3.1e-47 193.0 185 50.8
BcaB02g11085 Brassica carinata HOM05D007054 ORTHO05D008888 1.2e-46 191.0 167 53.9
Thhalv10011746m.g Eutrema salsugineum HOM05D007054 ORTHO05D008888 2.7e-46 189.9 180 48.3
BolC5t32180H Brassica oleracea HOM05D007054 ORTHO05D008888 4.5e-46 189.1 167 53.9
HPP92_001831 Vanilla planifolia HOM05D007054 ORTHO05D008888 1.0e-45 188.0 153 59.5
Aqoxy2G00166 Aquilegia oxysepala HOM05D007054 ORTHO05D008888 1.7e-45 187.2 197 46.7
Sed0021769 Sechium edule HOM05D007054 ORTHO05D008888 1.5e-41 174.1 139 61.2
Nitab4.5_0000604g0160 Nicotiana tabacum HOM05D007054 ORTHO05D008888 3.7e-40 169.5 160 53.8
VMungo1215G1743 Vigna mungo HOM05D007054 ORTHO05D008888 4.9e-40 169.1 148 60.1
Cpa.g.sc62.54 Carica papaya HOM05D007054 ORTHO05D008888 8.3e-40 168.3 120 70.0
Eucgr.I01181 Eucalyptus grandis HOM05D007054 ORTHO05D008888 2.7e-38 163.3 129 61.2
DCAR_022067 Daucus carota HOM05D007054 ORTHO05D008888 5.6e-36 155.6 183 45.9
SEGI_41084 Sequoiadendron giganteum HOM05D007054 ORTHO05D008888 8.3e-32 141.7 233 32.2
Pp3c23_6910 Physcomitrium patens HOM05D007054 ORTHO05D008888 7.5e-25 118.6 168 35.7
AagrBONN_evm.TU.Sc2ySwM_344.1640 Anthoceros agrestis HOM05D007054 ORTHO05D008888 9.8e-25 118.2 121 44.6
unitig_8.g3574 Utricularia gibba HOM05D007054 ORTHO05D008888 9.8e-25 118.2 108 51.9
arahy.Tifrunner.gnm1.ann1.2HX679 Arachis hypogaea HOM05D007054 ORTHO05D008888 1.4e-15 87.8 81 54.3
MBI16_g09811_MAGBIO Magnolia biondii HOM05D008077 ORTHO05D010221 1.9e-15 87.4 164 28.0
arahy.Tifrunner.gnm1.ann1.I8PDZB Arachis hypogaea HOM05D007054 ORTHO05D008888 3.2e-15 86.7 84 53.6
SEGI_26902 Sequoiadendron giganteum HOM05D007054 ORTHO05D008888 1.2e-14 84.7 162 29.6
CANSAT25G1642 Cannabis sativa HOM05D007054 ORTHO05D008888 3.5e-14 83.2 125 44.8
TAR376G0563 Trochodendron aralioides HOM05D008077 ORTHO05D010221 2.3e-13 80.5 155 29.0
Nn6g34549 Nelumbo nucifera HOM05D008077 ORTHO05D010221 5.6e-12 75.9 154 29.2
PSO541G6554 Papaver somniferum HOM05D008077 ORTHO05D010221 9.5e-12 75.1 158 27.8
Dinv44921 Davidia involucrata HOM05D008077 ORTHO05D010221 1.6e-11 74.3 176 29.0
PSO675G3170 Papaver somniferum HOM05D008077 ORTHO05D010221 1.6e-11 74.3 160 30.6
Nn5g29374 Nelumbo nucifera HOM05D007054 ORTHO05D008888 2.8e-11 73.6 66 50.0
Aa31sc103G20 Aethionema arabicum HOM05D007054 ORTHO05D008888 6.2e-11 72.4 53 52.8
CANSAT25G0587 Cannabis sativa HOM05D008077 ORTHO05D010221 1.1e-10 71.6 208 28.4
Thecc.08G082700 Theobroma cacao HOM05D008077 ORTHO05D010221 2.4e-10 70.5 179 27.4
Manes.18G051200 Manihot esculenta HOM05D008077 ORTHO05D010221 3.1e-10 70.1 190 24.2
Aa31LG1G22300 Aethionema arabicum HOM05D007054 ORTHO05D008888 6.8e-10 68.9 53 52.8
arahy.Tifrunner.gnm1.ann1.RU27EM Arachis hypogaea HOM05D007054 ORTHO05D008888 6.8e-10 68.9 62 56.5
Gohir.D01G112200 Gossypium hirsutum HOM05D008077 ORTHO05D010221 1.5e-09 67.8 164 27.4
CDE06G2465 Ceratophyllum demersum HOM05D008077 ORTHO05D010221 2.6e-09 67.0 154 27.3
Gorai.002G137100 Gossypium raimondii HOM05D008077 ORTHO05D010221 2.6e-09 67.0 164 26.8
CSS0006446 Camellia sinensis var. sinensis HOM05D008077 ORTHO05D010221 4.4e-09 66.2 148 27.0
Duzib116G0694 Durio zibethinus HOM05D008077 ORTHO05D010221 5.8e-09 65.9 184 27.2
GSVIVG01009281001 Vitis vinifera HOM05D008077 ORTHO05D010221 5.8e-09 65.9 148 25.0
Pp3c24_11510 Physcomitrium patens HOM05D007054 ORTHO05D008888 9.9e-09 65.1 143 25.9
CARHR039540 Cardamine hirsuta HOM05D007054 ORTHO05D008888 1.7e-08 64.3 36 66.7
VMungo0647G0255 Vigna mungo HOM05D008077 ORTHO05D010221 1.7e-08 64.3 186 24.2
CSS0048473 Camellia sinensis var. sinensis HOM05D008077 ORTHO05D010221 2.2e-08 63.9 134 27.6
TWI56G0834 Tripterygium wilfordii HOM05D008077 ORTHO05D010221 2.2e-08 63.9 170 24.7
Sc02g0008240 Simmondsia chinensis HOM05D008077 ORTHO05D010221 3.8e-08 63.2 147 27.9
Atru.chr13.887 Acer truncatum HOM05D008077 ORTHO05D010221 4.9e-08 62.8 196 25.0
Nitab4.5_0002263g0050 Nicotiana tabacum HOM05D007054 ORTHO05D008888 1.1e-07 61.6 33 72.7
Ciclev10002390m.g Citrus clementina HOM05D008077 ORTHO05D010221 1.4e-07 61.2 162 25.9
Dinv39194 Davidia involucrata HOM05D008077 ORTHO05D010221 1.4e-07 61.2 154 24.7
Gohir.A01G124500 Gossypium hirsutum HOM05D008077 ORTHO05D010221 2.4e-07 60.5 171 26.9
Phvul.001G032000 Phaseolus vulgaris HOM05D008077 ORTHO05D010221 2.4e-07 60.5 193 22.3
Actinidia19284 Actinidia chinensis HOM05D008077 ORTHO05D010221 9.2e-07 58.5 134 26.1
PGR031G0263 Punica granatum HOM05D008077 ORTHO05D010221 1.6e-06 57.8 114 31.6
Eucgr.F02208 Eucalyptus grandis HOM05D008077 ORTHO05D010221 7.8e-06 55.5 134 26.9
Prupe.1G417600 Prunus persica HOM05D008077 ORTHO05D010221 7.8e-06 55.5 127 25.2


User provided reference genes

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