Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN27G0664 Fragaria x ananassa HOM05D007479 ORTHO05D009416 4.2e-93 344.7 183 100.0
FAN20G0962 Fragaria x ananassa HOM05D007479 ORTHO05D009416 3.6e-92 341.7 183 98.9
FvH4_2g24710 Fragaria vesca HOM05D007479 ORTHO05D009416 1.4e-83 313.2 183 91.8
RcHm_v2.0_Chr6g0292541 Rosa chinensis HOM05D007479 ORTHO05D009416 4.1e-80 301.6 186 87.6
FAN24G3263 Fragaria x ananassa HOM05D000112 ORTHO05D000564 1.2e-74 283.5 161 93.2
MD00G1056400 Malus domestica HOM05D007479 ORTHO05D009416 1.5e-61 240.0 185 71.4
Prupe.8G252200 Prunus persica HOM05D007479 ORTHO05D009416 9.5e-61 237.3 192 70.8
GSVIVG01011009001 Vitis vinifera HOM05D007479 ORTHO05D009416 5.2e-51 204.9 173 63.6
QL12p023941 Quercus lobata HOM05D007479 ORTHO05D009416 7.6e-50 201.1 188 63.8
Cpa.g.sc9.160 Carica papaya HOM05D007479 ORTHO05D009416 3.8e-49 198.7 186 61.8
Cfa006037 Carpinus fangiana HOM05D007479 ORTHO05D009416 3.2e-48 195.7 186 65.6
Atru.chr5.1282 Acer truncatum HOM05D007479 ORTHO05D009416 2.1e-47 193.0 184 62.5
Manes.01G213600 Manihot esculenta HOM05D007479 ORTHO05D009416 3.5e-47 192.2 122 78.7
Ciclev10022531m.g Citrus clementina HOM05D007479 ORTHO05D009416 1.7e-46 189.9 167 65.3
TWI59G0977 Tripterygium wilfordii HOM05D007479 ORTHO05D009416 1.7e-46 189.9 152 67.1
TWI59G1446 Tripterygium wilfordii HOM05D007479 ORTHO05D009416 1.7e-46 189.9 152 67.1
CiPaw.07G099900 Carya illinoinensis HOM05D007479 ORTHO05D009416 2.3e-46 189.5 113 85.0
Duzib133G1271 Durio zibethinus HOM05D007479 ORTHO05D009416 2.3e-46 189.5 160 62.5
CANSAT25G0138 Cannabis sativa HOM05D007479 ORTHO05D009416 1.1e-45 187.2 184 60.9
CSS0010600 Camellia sinensis var. sinensis HOM05D007479 ORTHO05D009416 1.5e-45 186.8 182 62.1
CSS0014944 Camellia sinensis var. sinensis HOM05D007479 ORTHO05D009416 1.5e-45 186.8 182 62.1
Gohir.D08G080200 Gossypium hirsutum HOM05D007479 ORTHO05D009416 4.3e-45 185.3 145 67.6
Thecc.01G290200 Theobroma cacao HOM05D007479 ORTHO05D009416 5.6e-45 184.9 182 59.3
Gorai.004G085300 Gossypium raimondii HOM05D007479 ORTHO05D009416 7.3e-45 184.5 145 67.6
Haze_04810 Corylus avellana HOM05D007479 ORTHO05D009416 9.6e-45 184.1 203 59.6
arahy.Tifrunner.gnm1.ann1.5G1G6M Arachis hypogaea HOM05D007479 ORTHO05D009416 2.1e-44 183.0 130 71.5
TAR362G0341 Trochodendron aralioides HOM05D007479 ORTHO05D009416 2.8e-44 182.6 124 73.4
Aqoxy2G03133 Aquilegia oxysepala HOM05D007479 ORTHO05D009416 1.4e-43 180.3 124 71.8
ClCG09G006510 Citrullus lanatus HOM05D007479 ORTHO05D009416 5.2e-43 178.3 147 66.0
Sed0025615 Sechium edule HOM05D007479 ORTHO05D009416 5.2e-43 178.3 181 59.1
Hma1.2p1_0209F.1_g089100 Hydrangea macrophylla HOM05D007479 ORTHO05D009416 9.0e-43 177.6 106 82.1
COL.COLO4_08032 Corchorus olitorius HOM05D007479 ORTHO05D009416 2.6e-42 176.0 182 54.9
Gohir.A08G072000 Gossypium hirsutum HOM05D007479 ORTHO05D009416 2.6e-42 176.0 146 65.8
MBI19_g32765_MAGBIO Magnolia biondii HOM05D007479 ORTHO05D009416 2.6e-42 176.0 130 70.8
EL10Ac7g17366 Beta vulgaris HOM05D007479 ORTHO05D009416 3.4e-42 175.6 108 78.7
Oeu047908.1 Olea europaea HOM05D007479 ORTHO05D009416 3.4e-42 175.6 112 78.6
PGR044G0517 Punica granatum HOM05D007479 ORTHO05D009416 3.4e-42 175.6 120 73.3
CARHR251580 Cardamine hirsuta HOM05D007479 ORTHO05D009416 4.4e-42 175.3 147 59.2
MELO3C015894.2 Cucumis melo HOM05D007479 ORTHO05D009416 5.8e-42 174.9 165 60.0
CsaV3_7G028280 Cucumis sativus L. HOM05D007479 ORTHO05D009416 9.9e-42 174.1 128 69.5
Actinidia00698 Actinidia chinensis HOM05D007479 ORTHO05D009416 1.3e-41 173.7 182 59.3
VMungo1383G0484 Vigna mungo HOM05D007479 ORTHO05D009416 2.2e-41 172.9 124 70.2
CSS0048836 Camellia sinensis var. sinensis HOM05D007479 ORTHO05D009416 2.9e-41 172.6 183 59.0
Phvul.001G201900 Phaseolus vulgaris HOM05D007479 ORTHO05D009416 2.9e-41 172.6 127 69.3
Glyma.19G206000 Glycine max HOM05D007479 ORTHO05D009416 4.9e-41 171.8 136 64.7
Eucgr.K03432 Eucalyptus grandis HOM05D007479 ORTHO05D009416 6.4e-41 171.4 110 75.5
Lj1g0024237 Lotus japonicus HOM05D007479 ORTHO05D009416 6.4e-41 171.4 181 54.7
Nn3g21272 Nelumbo nucifera HOM05D007479 ORTHO05D009416 8.4e-41 171.0 121 71.9
AT4G03150 Arabidopsis thaliana HOM05D007479 ORTHO05D009416 1.1e-40 170.6 130 65.4
Migut.N01396 Erythranthe guttata HOM05D007479 ORTHO05D009416 1.9e-40 169.9 101 79.2
MSTRG.12593 Avicennia marina HOM05D007479 ORTHO05D009416 4.2e-40 168.7 115 71.3
AUR62036657 Chenopodium quinoa HOM05D007479 ORTHO05D009416 4.2e-40 168.7 112 71.4
Lalb_Chr18g0047491 Lupinus albus HOM05D007479 ORTHO05D009416 4.2e-40 168.7 129 68.2
Rhsim13G0017200 Rhododendron simsii HOM05D007479 ORTHO05D009416 4.2e-40 168.7 142 66.2
Sabra14G0101000 Salix brachista HOM05D007479 ORTHO05D009416 4.2e-40 168.7 176 58.0
DCAR_002787 Daucus carota HOM05D007479 ORTHO05D009416 5.4e-40 168.3 119 72.3
Carub.0006s3390 Capsella rubella HOM05D007479 ORTHO05D009416 7.1e-40 167.9 123 65.0
Ca_09112_v3 Cicer arietinum L. HOM05D000335 ORTHO05D001251 7.1e-40 167.9 124 68.5
Thhalv10029006m.g Eutrema salsugineum HOM05D007479 ORTHO05D009416 7.1e-40 167.9 130 64.6
AL6G49780 Arabidopsis lyrata HOM05D007479 ORTHO05D009416 1.2e-39 167.2 176 51.1
Sc17g0003550 Simmondsia chinensis HOM05D007479 ORTHO05D009416 1.2e-39 167.2 125 68.8
Sp6g03190 Schrenkiella parvula HOM05D007479 ORTHO05D009416 1.6e-39 166.8 124 65.3
HanXRQChr11g0350171 Helianthus annuus HOM05D007479 ORTHO05D009416 2.1e-39 166.4 120 68.3
THA.LOC104826012 Tarenaya hassleriana HOM05D007479 ORTHO05D009416 2.1e-39 166.4 122 67.2
Lsat_1_v5_gn_8_55221 Lactuca sativa HOM05D007479 ORTHO05D009416 3.5e-39 165.6 121 67.8
Medtr7g107680 Medicago truncatula HOM05D007479 ORTHO05D009416 3.5e-39 165.6 131 64.9
A09p02470 Brassica napus HOM05D007479 ORTHO05D009416 4.6e-39 165.2 108 71.3
BraA09t35894Z Brassica rapa HOM05D007479 ORTHO05D009416 4.6e-39 165.2 108 71.3
ECA236G2582 Erigeron canadensis HOM05D007479 ORTHO05D009416 4.6e-39 165.2 146 61.6
BolC9t53187H Brassica oleracea HOM05D007479 ORTHO05D009416 6.0e-39 164.9 124 65.3
BcaB01g01976 Brassica carinata HOM05D007479 ORTHO05D009416 7.8e-39 164.5 124 63.7
C09p02570 Brassica napus HOM05D007479 ORTHO05D009416 7.8e-39 164.5 124 63.7
Nitab4.5_0004150g0020 Nicotiana tabacum HOM05D007479 ORTHO05D009416 1.7e-38 163.3 103 76.7
Peaxi162Scf01039g00126 Petunia axillaris HOM05D007479 ORTHO05D009416 1.7e-38 163.3 147 59.2
Psat3g024840 Pisum sativum HOM05D007479 ORTHO05D009416 1.7e-38 163.3 103 75.7
Potri.014G135400 Populus trichocarpa HOM05D007479 ORTHO05D009416 1.7e-38 163.3 105 78.1
TPR.G32316 Trifolium pratense HOM05D007479 ORTHO05D009416 2.3e-38 162.9 104 74.0
Nitab4.5_0002093g0220 Nicotiana tabacum HOM05D007479 ORTHO05D009416 3.9e-38 162.2 125 68.0
HPP92_010636 Vanilla planifolia HOM05D007479 ORTHO05D009416 3.9e-38 162.2 114 69.3
Cc01_g20220 Coffea canephora HOM05D007479 ORTHO05D009416 1.5e-37 160.2 120 67.5
Sopen06g035860 Solanum pennellii HOM05D007479 ORTHO05D009416 1.6e-36 156.8 165 54.5
SGA_v2.0_scaffold172G39060 Striga asiatica HOM05D007479 ORTHO05D009416 1.6e-36 156.8 179 50.3
Hma1.2p1_0209F.1_g089110 Hydrangea macrophylla HOM05D007479 ORTHO05D009416 2.1e-36 156.4 87 86.2
PGSC0003DMG400024042 Solanum tuberosum HOM05D007479 ORTHO05D009416 2.1e-36 156.4 139 59.0
CDE09G0484 Ceratophyllum demersum HOM05D007479 ORTHO05D009416 3.6e-36 155.6 112 67.9
PSO210G3923 Papaver somniferum HOM05D007479 ORTHO05D009416 3.6e-36 155.6 182 50.5
PSO572G0003 Papaver somniferum HOM05D007479 ORTHO05D009416 3.6e-36 155.6 179 49.7
PSO832G0938 Papaver somniferum HOM05D007479 ORTHO05D009416 3.6e-36 155.6 179 49.7
PSO832G2794 Papaver somniferum HOM05D007479 ORTHO05D009416 3.6e-36 155.6 179 49.7
SalBow6G0786 Salvia bowleyana HOM05D007479 ORTHO05D009416 3.6e-36 155.6 100 76.0
Solyc06g084470.4 Solanum lycopersicum HOM05D007479 ORTHO05D009416 3.6e-36 155.6 165 53.9
Hund18029 Selenicereus undatus HOM05D007479 ORTHO05D009416 4.8e-36 155.2 151 56.3
Lj2P1185T15 Lonicera japonica HOM05D007479 ORTHO05D009416 1.4e-35 153.7 87 86.2
unitig_21.g20281 Utricularia gibba HOM05D007479 ORTHO05D009416 3.1e-35 152.5 106 68.9
AUR62034613 Chenopodium quinoa HOM05D007479 ORTHO05D009416 4.5e-34 148.7 101 72.3
Os12g0534100 Oryza sativa ssp. japonica HOM05D007479 ORTHO05D009416 3.8e-33 145.6 145 52.4
vmacro02508 Vaccinium macrocarpon HOM05D007479 ORTHO05D009416 4.9e-33 145.2 89 77.5
ATR0706G261 Amborella trichopoda HOM05D001702 ORTHO05D001791 1.9e-32 143.3 101 64.4
SalBow8G4180 Salvia bowleyana HOM05D007479 ORTHO05D009416 1.0e-30 137.5 85 78.8
Mapoly0029s0155 Marchantia polymorpha HOM05D007479 ORTHO05D009416 9.6e-29 131.0 125 52.8
Mapoly0275s0001 Marchantia polymorpha HOM05D007479 ORTHO05D009416 9.6e-29 131.0 125 52.8
AagrBONN_evm.TU.Sc2ySwM_368.764 Anthoceros agrestis HOM05D007479 ORTHO05D009416 3.7e-28 129.0 109 56.0
Pp3c5_13320 Physcomitrium patens HOM05D007479 ORTHO05D009416 5.3e-27 125.2 183 41.5
CBR_g22325 Chara braunii HOM05D007479 ORTHO05D009416 3.4e-26 122.5 124 52.4
Dinv32992 Davidia involucrata HOM05D007479 ORTHO05D009416 2.4e-11 73.2 54 64.8


User provided reference genes

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