Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN27G0611 Fragaria x ananassa HOM05D006157 ORTHO05D007826 1.7e-118 429.5 231 100.0
FAN20G0621 Fragaria x ananassa HOM05D006157 ORTHO05D007826 4.8e-118 427.9 231 98.3
FAN15G3536 Fragaria x ananassa HOM05D006157 ORTHO05D007826 1.0e-115 420.2 231 93.1
FvH4_2g34660 Fragaria vesca HOM05D006157 ORTHO05D007826 6.7e-112 407.5 233 95.7
RcHm_v2.0_Chr6g0307431 Rosa chinensis HOM05D006157 ORTHO05D007826 1.0e-104 383.6 222 86.0
Prupe.1G438800 Prunus persica HOM05D006157 ORTHO05D007826 6.4e-70 268.1 209 70.8
MD15G1085000 Malus domestica HOM05D006157 ORTHO05D007826 1.9e-66 256.5 209 68.9
MD08G1103700 Malus domestica HOM05D006157 ORTHO05D007826 2.3e-64 249.6 209 72.7
Duzib116G0710 Durio zibethinus HOM05D006157 ORTHO05D007826 1.3e-54 217.2 215 58.1
Potri.002G127800 Populus trichocarpa HOM05D006157 ORTHO05D007826 1.1e-53 214.2 212 58.5
Cfa018525 Carpinus fangiana HOM05D006157 ORTHO05D007826 7.1e-53 211.5 215 59.5
QL02p005407 Quercus lobata HOM05D006157 ORTHO05D007826 1.6e-52 210.3 210 57.1
CiPaw.15G061800 Carya illinoinensis HOM05D006157 ORTHO05D007826 7.8e-52 208.0 212 62.3
Ciclev10002442m.g Citrus clementina HOM05D006157 ORTHO05D007826 3.0e-51 206.1 224 54.5
Potri.014G032300 Populus trichocarpa HOM05D006157 ORTHO05D007826 5.1e-51 205.3 211 58.8
Haze_17545 Corylus avellana HOM05D006157 ORTHO05D007826 6.6e-51 204.9 216 58.3
Haze_17554 Corylus avellana HOM05D006157 ORTHO05D007826 6.6e-51 204.9 216 58.3
TWI56G1258 Tripterygium wilfordii HOM05D006157 ORTHO05D007826 6.6e-51 204.9 211 52.6
Sabra14G0022700 Salix brachista HOM05D006157 ORTHO05D007826 1.1e-50 204.1 213 57.3
Atru.chr13.647 Acer truncatum HOM05D006157 ORTHO05D007826 2.5e-50 203.0 221 52.9
Manes.05G171900 Manihot esculenta HOM05D006157 ORTHO05D007826 1.6e-49 200.3 209 58.4
Manes.05G171901 Manihot esculenta HOM05D006157 ORTHO05D007826 1.6e-49 200.3 209 58.4
Psat6g012720 Pisum sativum HOM05D006157 ORTHO05D007826 8.1e-49 198.0 208 56.2
Medtr1g019800 Medicago truncatula HOM05D006157 ORTHO05D007826 1.2e-47 194.1 210 56.2
Gohir.D06G015100 Gossypium hirsutum HOM05D006157 ORTHO05D007826 2.0e-47 193.4 215 50.2
Gohir.A06G017000 Gossypium hirsutum HOM05D006157 ORTHO05D007826 3.4e-47 192.6 215 49.8
Gorai.010G017900 Gossypium raimondii HOM05D006157 ORTHO05D007826 3.4e-47 192.6 215 49.8
Manes.18G032700 Manihot esculenta HOM05D006157 ORTHO05D007826 4.4e-47 192.2 209 53.1
TPR.G13684 Trifolium pratense HOM05D006157 ORTHO05D007826 5.8e-47 191.8 210 55.7
CsaV3_2G028070 Cucumis sativus L. HOM05D006157 ORTHO05D007826 2.9e-46 189.5 211 51.7
MELO3C010885.2 Cucumis melo HOM05D006157 ORTHO05D007826 6.4e-46 188.3 211 51.2
Cpa.g.c24415.4 Carica papaya HOM05D006157 ORTHO05D007826 8.4e-46 188.0 218 52.8
CANSAT54G0006 Cannabis sativa HOM05D006157 ORTHO05D007826 1.1e-45 187.6 215 52.1
Sed0015883 Sechium edule HOM05D006157 ORTHO05D007826 4.2e-45 185.7 210 51.0
Sed0006561 Sechium edule HOM05D006157 ORTHO05D007826 2.1e-44 183.3 211 50.2
Ca_13302_v3 Cicer arietinum L. HOM05D006157 ORTHO05D007826 3.5e-44 182.6 207 52.7
Hma1.2p1_0718F.1_g208450 Hydrangea macrophylla HOM05D006157 ORTHO05D007826 4.6e-44 182.2 210 51.9
Actinidia23263 Actinidia chinensis HOM05D006157 ORTHO05D007826 2.3e-43 179.9 224 48.7
vmacro21540 Vaccinium macrocarpon HOM05D006157 ORTHO05D007826 2.5e-42 176.4 219 49.8
ClCG08G015710 Citrullus lanatus HOM05D006157 ORTHO05D007826 1.6e-41 173.7 202 51.5
Nitab4.5_0000686g0050 Nicotiana tabacum HOM05D006157 ORTHO05D007826 1.6e-41 173.7 209 44.0
Nitab4.5_0001101g0070 Nicotiana tabacum HOM05D006157 ORTHO05D007826 1.6e-41 173.7 205 44.4
Lj5g0002869 Lotus japonicus HOM05D006157 ORTHO05D007826 3.6e-41 172.6 214 54.2
Gohir.D02G092100 Gossypium hirsutum HOM05D006157 ORTHO05D007826 1.1e-40 171.0 215 48.8
GSVIVG01009525001 Vitis vinifera HOM05D006157 ORTHO05D007826 1.1e-40 171.0 213 52.6
Gorai.005G103500 Gossypium raimondii HOM05D006157 ORTHO05D007826 1.8e-40 170.2 215 48.8
Gohir.A03G079324 Gossypium hirsutum HOM05D006157 ORTHO05D007826 3.1e-40 169.5 215 49.3
FvH4_2g34701 Fragaria vesca HOM05D006157 ORTHO05D007826 5.3e-40 168.7 114 87.7
CSS0004131 Camellia sinensis var. sinensis HOM05D006157 ORTHO05D007826 1.5e-39 167.2 221 43.9
Eucgr.F00242 Eucalyptus grandis HOM05D006157 ORTHO05D007826 5.8e-39 165.2 210 49.0
Lalb_Chr14g0368791 Lupinus albus HOM05D006157 ORTHO05D007826 9.9e-39 164.5 204 52.0
Thecc.08G011200 Theobroma cacao HOM05D006157 ORTHO05D007826 9.9e-39 164.5 157 56.1
Peaxi162Scf00064g00125 Petunia axillaris HOM05D006157 ORTHO05D007826 1.7e-38 163.7 202 48.0
PGR083G2028 Punica granatum HOM05D006157 ORTHO05D007826 3.8e-38 162.5 215 45.6
Dinv35975 Davidia involucrata HOM05D006157 ORTHO05D007826 4.9e-38 162.2 223 46.6
Nitab4.5_0000453g0220 Nicotiana tabacum HOM05D006157 ORTHO05D007890 8.4e-38 161.4 199 51.3
TAR628G1181 Trochodendron aralioides HOM05D006157 ORTHO05D007826 1.6e-36 157.1 210 46.7
PGSC0003DMG400036180 Solanum tuberosum HOM05D006157 ORTHO05D007826 2.7e-36 156.4 207 42.0
Lj4C53T12 Lonicera japonica HOM05D006157 ORTHO05D007826 7.8e-36 154.8 233 42.9
VMungo1309G0335 Vigna mungo HOM05D006157 ORTHO05D007826 1.0e-35 154.5 214 45.8
Nitab4.5_0004184g0060 Nicotiana tabacum HOM05D006157 ORTHO05D007890 8.7e-35 151.4 203 45.8
THA.LOC104806945 Tarenaya hassleriana HOM05D006157 ORTHO05D007826 1.1e-34 151.0 217 44.2
Rhsim06G0048100 Rhododendron simsii HOM05D006157 ORTHO05D007826 1.9e-34 150.2 217 41.9
Sopen04g032780 Solanum pennellii HOM05D006157 ORTHO05D007826 1.9e-34 150.2 208 41.8
Glyma.04G037500 Glycine max HOM05D006157 ORTHO05D007826 3.3e-34 149.4 216 47.2
EL10Ac1g01781 Beta vulgaris HOM05D006157 ORTHO05D007826 7.3e-34 148.3 228 42.1
Phvul.009G063700 Phaseolus vulgaris HOM05D006157 ORTHO05D007826 7.3e-34 148.3 212 43.9
Lsat_1_v5_gn_4_124041 Lactuca sativa HOM05D006157 ORTHO05D007826 9.6e-34 147.9 215 42.3
Glyma.06G038400 Glycine max HOM05D006157 ORTHO05D007826 1.3e-33 147.5 219 46.1
Nn5g30225 Nelumbo nucifera HOM05D006157 ORTHO05D007826 1.3e-33 147.5 220 43.6
Phvul.001G020800 Phaseolus vulgaris HOM05D006157 ORTHO05D007826 1.3e-33 147.5 206 46.1
MSTRG.25101 Avicennia marina HOM05D006157 ORTHO05D007826 1.6e-33 147.1 228 43.0
Cc10_g04340 Coffea canephora HOM05D006157 ORTHO05D007826 1.6e-33 147.1 231 40.7
Glyma.17G243500 Glycine max HOM05D006157 ORTHO05D007826 2.1e-33 146.7 210 46.7
Peaxi162Scf00528g00414 Petunia axillaris HOM05D006157 ORTHO05D007826 2.4e-32 143.3 198 44.9
SalBow8G3379 Salvia bowleyana HOM05D006157 ORTHO05D007826 5.3e-32 142.1 215 45.1
VMungo0647G0691 Vigna mungo HOM05D006157 ORTHO05D007826 5.3e-32 142.1 207 46.9
AUR62022432 Chenopodium quinoa HOM05D006157 ORTHO05D007826 1.2e-31 141.0 217 41.9
AUR62039307 Chenopodium quinoa HOM05D006157 ORTHO05D007826 2.6e-31 139.8 224 40.6
Sopen12g030790 Solanum pennellii HOM05D006157 ORTHO05D007826 1.3e-30 137.5 199 46.7
Glyma.14G081800 Glycine max HOM05D006157 ORTHO05D007826 6.4e-30 135.2 212 43.9
HanXRQChr09g0267931 Helianthus annuus HOM05D006157 ORTHO05D007826 8.4e-30 134.8 217 38.7
Solyc04g079170.4 Solanum lycopersicum HOM05D006157 ORTHO05D007826 1.9e-29 133.7 202 40.1
Ah.05g168840 Amaranthus hybridus HOM05D006157 ORTHO05D007826 7.1e-29 131.7 193 42.0
ECA232G2668 Erigeron canadensis HOM05D006157 ORTHO05D007826 7.1e-29 131.7 210 40.5
Solyc12g088890.3 Solanum lycopersicum HOM05D006157 ORTHO05D007890 3.5e-28 129.4 173 50.9
Nn1g05836 Nelumbo nucifera HOM05D006157 ORTHO05D007826 4.6e-28 129.0 205 39.5
SGA_v2.0_scaffold14G07032 Striga asiatica HOM05D006157 ORTHO05D007826 1.3e-27 127.5 209 39.7
DCAR_011305 Daucus carota HOM05D005231 ORTHO05D006387 1.8e-27 127.1 203 41.9
BcaB07g33839 Brassica carinata HOM05D006157 ORTHO05D007826 2.5e-26 123.2 195 40.5
Aa31sc924G20 Aethionema arabicum HOM05D006157 ORTHO05D007826 4.8e-25 119.0 214 37.4
Sp1g34500 Schrenkiella parvula HOM05D006157 ORTHO05D007826 4.8e-25 119.0 190 39.5
SpUn0102_0020 Schrenkiella parvula HOM05D006157 ORTHO05D007826 4.8e-25 119.0 190 39.5
CARHR037020 Cardamine hirsuta HOM05D006157 ORTHO05D007826 8.1e-25 118.2 191 39.3
MBI02_g17343_MAGBIO Magnolia biondii HOM05D006157 ORTHO05D007826 1.4e-24 117.5 204 35.3
A10p06400 Brassica napus HOM05D006157 ORTHO05D007826 4.0e-24 115.9 200 39.5
Migut.C00597 Erythranthe guttata HOM05D006157 ORTHO05D007826 4.0e-24 115.9 202 38.1
Thhalv10011797m.g Eutrema salsugineum HOM05D006157 ORTHO05D007826 5.3e-24 115.5 194 39.2
BolSC99t61279H Brassica oleracea HOM05D006157 ORTHO05D007826 9.0e-24 114.8 195 39.5
COL.COLO4_26474 Corchorus olitorius HOM05D006157 ORTHO05D007826 3.4e-23 112.8 210 37.6
C06p01910 Brassica napus HOM05D006157 ORTHO05D007826 4.5e-23 112.5 195 39.0
Aqoxy6G01361 Aquilegia oxysepala HOM05D006157 ORTHO05D007826 5.8e-23 112.1 210 38.1
PSO541G3363 Papaver somniferum HOM05D006157 ORTHO05D007826 2.9e-22 109.8 215 33.5
AT1G47410 Arabidopsis thaliana HOM05D006157 ORTHO05D007826 3.8e-22 109.4 198 38.4
PGSC0003DMG400015419 Solanum tuberosum HOM05D006157 ORTHO05D007826 1.1e-21 107.8 136 44.1
AL1G53700 Arabidopsis lyrata HOM05D006157 ORTHO05D007826 3.2e-21 106.3 200 38.5
Carub.0001s3622 Capsella rubella HOM05D006157 ORTHO05D007826 3.2e-21 106.3 198 36.9
Sc02g0007020 Simmondsia chinensis HOM05D006157 ORTHO05D007826 3.2e-21 106.3 223 41.3
AUR62019555 Chenopodium quinoa HOM05D006157 ORTHO05D007826 9.3e-21 104.8 159 42.1
Migut.N02699 Erythranthe guttata HOM05D006157 ORTHO05D007826 9.3e-21 104.8 209 37.3
Actinidia22616 Actinidia chinensis HOM05D006157 ORTHO05D007826 6.0e-20 102.1 171 43.3
arahy.Tifrunner.gnm1.ann1.HUL940 Arachis hypogaea HOM05D006157 ORTHO05D007826 3.0e-19 99.8 221 41.2
arahy.Tifrunner.gnm1.ann1.R9H0NA Arachis hypogaea HOM05D006157 ORTHO05D007826 3.0e-19 99.8 221 41.2
BcaC08g42947 Brassica carinata HOM05D006157 ORTHO05D007826 2.8e-17 93.2 91 52.7
PSO675G5393 Papaver somniferum HOM05D006157 ORTHO05D007826 1.5e-15 87.4 310 25.8
Duzib093G2157 Durio zibethinus HOM05D006157 ORTHO05D007826 4.9e-14 82.4 108 47.2
ATR0100G006 Amborella trichopoda HOM05D006157 ORTHO05D007826 1.5e-10 70.9 156 35.3
ATR0100G061 Amborella trichopoda HOM05D006157 ORTHO05D007826 2.5e-10 70.1 158 36.1
unitig_22.g6773 Utricularia gibba HOM05D006157 ORTHO05D007826 4.3e-10 69.3 167 34.1
HPP92_027520 Vanilla planifolia HOM05D006157 ORTHO05D007826 1.7e-06 57.4 79 41.8
SalBow8G4867 Salvia bowleyana HOM05D006157 ORTHO05D007826 3.8e-06 56.2 33 72.7
Zm00001eb100900 Zea mays HOM05D006157 ORTHO05D007826 3.8e-06 56.2 52 53.8


User provided reference genes

Program Settings