Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN27G0467 Fragaria x ananassa HOM05D005519 ORTHO05D006423 1.3e-84 316.6 191 100.0
FAN24G1125 Fragaria x ananassa HOM05D003947 ORTHO05D004614 1.7e-60 236.5 201 80.1
FAN15G1092 Fragaria x ananassa HOM05D003947 ORTHO05D004614 7.9e-58 227.6 162 87.0
FvH4_2g13070 Fragaria vesca HOM05D005519 ORTHO05D006423 3.0e-57 225.7 173 86.1
RcHm_v2.0_Chr6g0274331 Rosa chinensis HOM05D005519 ORTHO05D006423 6.7e-57 224.6 174 86.2
MD05G1032800 Malus domestica HOM05D005519 ORTHO05D006423 1.0e-49 200.7 183 76.5
Glyma.10G222100 Glycine max HOM05D005519 ORTHO05D006423 1.1e-48 197.2 172 67.4
Glyma.20G169500 Glycine max HOM05D005519 ORTHO05D006423 1.9e-48 196.4 172 66.9
Prupe.8G039900 Prunus persica HOM05D005519 ORTHO05D006423 5.7e-48 194.9 179 78.8
Glyma.16G163800 Glycine max HOM05D005519 ORTHO05D006423 1.6e-47 193.4 176 67.0
VMungo0720G0436 Vigna mungo HOM05D005519 ORTHO05D006423 1.2e-45 187.2 172 68.0
MD10G1033800 Malus domestica HOM05D005519 ORTHO05D006423 1.0e-44 184.1 179 76.0
Glyma.02G079400 Glycine max HOM05D005519 ORTHO05D006423 1.3e-44 183.7 174 64.9
MSTRG.25301 Avicennia marina HOM05D005519 ORTHO05D006423 1.6e-42 176.8 176 74.4
arahy.Tifrunner.gnm1.ann1.8F5AL7 Arachis hypogaea HOM05D005519 ORTHO05D006423 1.3e-41 173.7 192 58.9
arahy.Tifrunner.gnm1.ann1.SKG6R6 Arachis hypogaea HOM05D005519 ORTHO05D006423 2.3e-41 172.9 192 58.3
Phvul.004G091300 Phaseolus vulgaris HOM05D005519 ORTHO05D006423 2.3e-41 172.9 177 58.2
Lj5g0019555 Lotus japonicus HOM05D005519 ORTHO05D006423 3.9e-41 172.2 175 66.3
PGR042G3808 Punica granatum HOM05D005519 ORTHO05D006423 5.1e-41 171.8 180 66.1
Sabra02G0051900 Salix brachista HOM05D005519 ORTHO05D006423 1.1e-40 170.6 184 69.6
CiPaw.15G012900 Carya illinoinensis HOM05D005519 ORTHO05D006423 1.9e-40 169.9 172 64.0
Phvul.007G083000 Phaseolus vulgaris HOM05D005519 ORTHO05D006423 1.9e-40 169.9 172 59.9
Psat6g190880 Pisum sativum HOM05D005519 ORTHO05D006423 4.3e-40 168.7 173 61.3
Potri.002G065000 Populus trichocarpa HOM05D005519 ORTHO05D006423 4.3e-40 168.7 184 69.6
Lalb_Chr03g0035541 Lupinus albus HOM05D005519 ORTHO05D006423 5.7e-40 168.3 180 57.2
Gohir.A05G246000 Gossypium hirsutum HOM05D005519 ORTHO05D006423 7.4e-40 167.9 176 67.0
Gohir.D05G247500 Gossypium hirsutum HOM05D005519 ORTHO05D006423 9.7e-40 167.5 176 69.9
Gorai.009G258300 Gossypium raimondii HOM05D005519 ORTHO05D006423 1.6e-39 166.8 176 69.9
VMungo0464G1678 Vigna mungo HOM05D005519 ORTHO05D006423 2.2e-39 166.4 178 65.7
Lalb_Chr19g0130091 Lupinus albus HOM05D005519 ORTHO05D006423 2.8e-39 166.0 173 59.5
Potri.005G196100 Populus trichocarpa HOM05D005519 ORTHO05D006423 2.8e-39 166.0 184 69.0
Manes.02G182800 Manihot esculenta HOM05D005519 ORTHO05D006423 3.7e-39 165.6 182 69.8
Hma1.2p1_0358F.1_g134710 Hydrangea macrophylla HOM05D005519 ORTHO05D006423 4.8e-39 165.2 176 65.9
Duzib116G0927 Durio zibethinus HOM05D005519 ORTHO05D006423 6.3e-39 164.9 175 63.4
Ca_10667_v3 Cicer arietinum L. HOM05D005519 ORTHO05D006423 8.2e-39 164.5 172 59.3
Dinv25895 Davidia involucrata HOM05D005519 ORTHO05D006423 8.2e-39 164.5 175 64.6
TWI32G0061 Tripterygium wilfordii HOM05D005519 ORTHO05D006423 1.1e-38 164.1 176 58.5
Lj2g0026694 Lotus japonicus HOM05D005519 ORTHO05D006423 1.4e-38 163.7 173 64.2
CiPaw.16G008800 Carya illinoinensis HOM05D005519 ORTHO05D006423 1.8e-38 163.3 177 62.7
Medtr1g098280 Medicago truncatula HOM05D005519 ORTHO05D006423 1.8e-38 163.3 174 63.8
QL02p037831 Quercus lobata HOM05D005519 ORTHO05D006423 1.8e-38 163.3 185 60.5
Cpa.g.sc49.79 Carica papaya HOM05D005519 ORTHO05D006423 2.4e-38 162.9 183 64.5
Duzib093G1843 Durio zibethinus HOM05D005519 ORTHO05D006423 2.4e-38 162.9 176 67.0
Manes.18G094400 Manihot esculenta HOM05D005519 ORTHO05D006423 9.1e-38 161.0 182 67.6
QL02p038173 Quercus lobata HOM05D005519 ORTHO05D006423 9.1e-38 161.0 183 60.1
TAR381G0167 Trochodendron aralioides HOM05D005519 ORTHO05D006423 9.1e-38 161.0 172 60.5
Peaxi162Scf00160g01746 Petunia axillaris HOM05D005519 ORTHO05D006423 1.2e-37 160.6 175 61.7
Sabra05G0149500 Salix brachista HOM05D005519 ORTHO05D006423 1.5e-37 160.2 179 64.2
TPR.G17016 Trifolium pratense HOM05D005519 ORTHO05D006423 1.5e-37 160.2 186 55.9
Cfa018287 Carpinus fangiana HOM05D005519 ORTHO05D006423 2.0e-37 159.8 185 58.9
Nitab4.5_0000872g0010 Nicotiana tabacum HOM05D005519 ORTHO05D006423 2.0e-37 159.8 174 63.8
CANSAT25G1666 Cannabis sativa HOM05D005519 ORTHO05D006423 2.6e-37 159.5 184 56.0
PGSC0003DMG400018793 Solanum tuberosum HOM05D005519 ORTHO05D006423 5.9e-37 158.3 174 58.0
TWI34G0476 Tripterygium wilfordii HOM05D005519 ORTHO05D006423 7.7e-37 157.9 174 66.1
vmacro01488 Vaccinium macrocarpon HOM05D005519 ORTHO05D006423 7.7e-37 157.9 176 63.1
Solyc12g056620.2 Solanum lycopersicum HOM05D005519 ORTHO05D006423 1.0e-36 157.5 174 57.5
CAN.G26.8 Capsicum annuum HOM05D005519 ORTHO05D006423 1.3e-36 157.1 174 67.2
Nitab4.5_0001103g0040 Nicotiana tabacum HOM05D005519 ORTHO05D006423 1.3e-36 157.1 174 62.6
Sopen04g027910 Solanum pennellii HOM05D005519 ORTHO05D006423 1.3e-36 157.1 174 66.7
Solyc04g071930.4 Solanum lycopersicum HOM05D005519 ORTHO05D006423 1.7e-36 156.8 174 67.2
Sopen12g029280 Solanum pennellii HOM05D005519 ORTHO05D006423 2.2e-36 156.4 174 56.9
Haze_17800 Corylus avellana HOM05D005519 ORTHO05D006423 3.8e-36 155.6 184 67.9
Sed0015682 Sechium edule HOM05D005519 ORTHO05D006423 5.0e-36 155.2 139 69.1
Ah.05g168160 Amaranthus hybridus HOM05D005519 ORTHO05D006423 6.5e-36 154.8 174 64.4
AT1G34000 Arabidopsis thaliana HOM05D005519 ORTHO05D006423 6.5e-36 154.8 172 62.2
Thecc.08G158600 Theobroma cacao HOM05D005519 ORTHO05D006423 8.5e-36 154.5 177 66.7
Lsat_1_v5_gn_6_101660 Lactuca sativa HOM05D005519 ORTHO05D006423 1.1e-35 154.1 179 60.3
A08p08390 Brassica napus HOM05D005519 ORTHO05D006423 1.9e-35 153.3 172 67.4
BraA08t32855Z Brassica rapa HOM05D005519 ORTHO05D006423 1.9e-35 153.3 172 67.4
Nitab4.5_0002812g0030 Nicotiana tabacum HOM05D005519 ORTHO05D006423 1.9e-35 153.3 174 64.4
PGSC0003DMG400025068 Solanum tuberosum HOM05D005519 ORTHO05D006423 2.5e-35 152.9 174 63.8
Aa31LG6G8220 Aethionema arabicum HOM05D005519 ORTHO05D006423 4.2e-35 152.1 172 63.4
Sc26g0002910 Simmondsia chinensis HOM05D005519 ORTHO05D006423 5.5e-35 151.8 175 60.6
SGA_v2.0_scaffold108G30869 Striga asiatica HOM05D005519 ORTHO05D006423 5.5e-35 151.8 127 73.2
Carub.0001s3208 Capsella rubella HOM05D005519 ORTHO05D006423 7.2e-35 151.4 173 62.4
Lsat_1_v5_gn_9_42101 Lactuca sativa HOM05D005519 ORTHO05D006423 7.2e-35 151.4 174 63.2
AL1G48440 Arabidopsis lyrata HOM05D005519 ORTHO05D006423 9.4e-35 151.0 172 60.5
DCAR_001160 Daucus carota HOM05D005519 ORTHO05D006423 1.2e-34 150.6 179 54.2
CAN.G495.8 Capsicum annuum HOM05D005519 ORTHO05D006423 1.6e-34 150.2 174 65.5
Cc10_g15180 Coffea canephora HOM05D005519 ORTHO05D006423 2.1e-34 149.8 178 66.9
BcaB07g33022 Brassica carinata HOM05D005519 ORTHO05D006423 3.6e-34 149.1 172 63.4
ClCG08G008840 Citrullus lanatus HOM05D005519 ORTHO05D006423 3.6e-34 149.1 155 66.5
Migut.C00964 Erythranthe guttata HOM05D005519 ORTHO05D006423 3.6e-34 149.1 177 59.3
Atru.chr13.2018 Acer truncatum HOM05D005519 ORTHO05D006423 4.6e-34 148.7 179 63.7
A09p32470 Brassica napus HOM05D005519 ORTHO05D006423 6.1e-34 148.3 172 65.1
C06p12090 Brassica napus HOM05D005519 ORTHO05D006423 6.1e-34 148.3 172 67.4
Ciclev10002625m.g Citrus clementina HOM05D005519 ORTHO05D006423 1.0e-33 147.5 175 64.0
Peaxi162Scf00360g00028 Petunia axillaris HOM05D005519 ORTHO05D006423 1.4e-33 147.1 190 50.5
Lj7A382T71 Lonicera japonica HOM05D005519 ORTHO05D006423 1.8e-33 146.7 172 62.2
BcaB04g17909 Brassica carinata HOM05D005519 ORTHO05D006423 2.3e-33 146.4 172 60.5
BolC8t47881H Brassica oleracea HOM05D005519 ORTHO05D006423 2.3e-33 146.4 172 63.4
Nn1g06007 Nelumbo nucifera HOM05D005519 ORTHO05D006423 2.3e-33 146.4 171 65.5
Nitab4.5_0000099g0170 Nicotiana tabacum HOM05D005519 ORTHO05D006423 2.3e-33 146.4 174 64.4
BraA09t38789Z Brassica rapa HOM05D005519 ORTHO05D006423 3.9e-33 145.6 172 63.4
Sed0018725 Sechium edule HOM05D005519 ORTHO05D006423 3.9e-33 145.6 170 55.9
THA.LOC104825113 Tarenaya hassleriana HOM05D005519 ORTHO05D006423 3.9e-33 145.6 172 58.7
Gohir.D02G068600 Gossypium hirsutum HOM05D005519 ORTHO05D006423 5.1e-33 145.2 172 60.5
Migut.N03201 Erythranthe guttata HOM05D005519 ORTHO05D006423 6.7e-33 144.8 174 60.9
CARHR033380 Cardamine hirsuta HOM05D005519 ORTHO05D006423 8.8e-33 144.4 172 64.5
Lj4A703G50 Lonicera japonica HOM05D005519 ORTHO05D006423 8.8e-33 144.4 140 69.3
THA.LOC104806763 Tarenaya hassleriana HOM05D005519 ORTHO05D006423 8.8e-33 144.4 175 61.1
Gorai.005G077500 Gossypium raimondii HOM05D005519 ORTHO05D006423 1.5e-32 143.7 172 61.6
unitig_26.g9895 Utricularia gibba HOM05D005519 ORTHO05D006423 1.5e-32 143.7 167 58.7
Nn5g28816 Nelumbo nucifera HOM05D005519 ORTHO05D006423 2.0e-32 143.3 182 62.1
Thhalv10008704m.g Eutrema salsugineum HOM05D005519 ORTHO05D006423 2.6e-32 142.9 173 60.7
BcaC08g43825 Brassica carinata HOM05D005519 ORTHO05D006423 7.4e-32 141.4 172 59.3
BolC6t36346H Brassica oleracea HOM05D005519 ORTHO05D006423 7.4e-32 141.4 172 59.3
Rhsim11G0087200 Rhododendron simsii HOM05D005519 ORTHO05D006423 7.4e-32 141.4 183 61.7
CDE04G2354 Ceratophyllum demersum HOM05D005519 ORTHO05D006423 9.7e-32 141.0 172 55.8
CsaV3_6G005050 Cucumis sativus L. HOM05D005519 ORTHO05D006423 1.3e-31 140.6 176 60.8
CSS0002205 Camellia sinensis var. sinensis HOM05D005519 ORTHO05D006423 1.7e-31 140.2 173 59.5
PSO541G5828 Papaver somniferum HOM05D005519 ORTHO05D006423 1.7e-31 140.2 182 47.8
MSTRG.1105 Avicennia marina HOM05D000084 ORTHO05D006423 2.8e-31 139.4 162 63.0
GSVIVG01034578001 Vitis vinifera HOM05D005519 ORTHO05D006423 2.8e-31 139.4 72 91.7
MBI04_g08940_MAGBIO Magnolia biondii HOM05D005519 ORTHO05D006423 4.8e-31 138.7 172 58.1
AUR62026639 Chenopodium quinoa HOM05D003947 ORTHO05D004614 6.3e-31 138.3 83 80.7
ECA246G0665 Erigeron canadensis HOM05D003947 ORTHO05D006423 1.8e-30 136.7 87 79.3
HPP92_000679 Vanilla planifolia HOM05D005519 ORTHO05D006423 6.9e-30 134.8 175 52.6
PSO675G0400 Papaver somniferum HOM05D005519 ORTHO05D006423 5.9e-29 131.7 180 51.7
ATR0580G316 Amborella trichopoda HOM05D005519 ORTHO05D006423 2.2e-28 129.8 173 57.8
HanXRQChr11g0320251 Helianthus annuus HOM05D005519 ORTHO05D006423 2.5e-27 126.3 151 58.3
Sp1g29260 Schrenkiella parvula HOM05D005519 ORTHO05D006423 7.9e-26 121.3 206 46.1
Zm00001eb357520 Zea mays HOM05D005519 ORTHO05D006423 1.8e-25 120.2 192 43.8
Zm00001eb160790 Zea mays HOM05D005519 ORTHO05D006423 2.3e-25 119.8 192 49.0
Oeu051280.1 Olea europaea HOM05D005519 ORTHO05D006423 8.8e-25 117.9 149 65.8
AUR62034898 Chenopodium quinoa HOM05D005519 ORTHO05D006423 1.3e-23 114.0 62 88.7
Os01g0589800 Oryza sativa ssp. japonica HOM05D005519 ORTHO05D006423 2.4e-22 109.8 57 87.7
Actinidia17771 Actinidia chinensis HOM05D005519 ORTHO05D006423 4.1e-22 109.0 104 54.8
A05p24090 Brassica napus HOM05D011378 ORTHO05D006423 5.3e-22 108.6 68 76.5
BraA05t21288Z Brassica rapa HOM05D003947 ORTHO05D006423 1.6e-21 107.1 73 75.3
COL.COLO4_03361 Corchorus olitorius HOM05D005519 ORTHO05D006423 5.9e-21 105.1 56 82.1
Dinv41044 Davidia involucrata HOM05D005519 ORTHO05D006423 3.8e-20 102.4 149 59.7
MELO3C029825.2 Cucumis melo HOM05D005519 ORTHO05D006423 5.0e-20 102.1 113 64.6
Hund30143 Selenicereus undatus HOM05D005519 ORTHO05D006423 1.1e-19 100.9 170 51.2
Mapoly0065s0010 Marchantia polymorpha HOM05D005519 ORTHO05D006423 4.2e-19 99.0 69 68.1
AagrBONN_evm.TU.Sc2ySwM_117.629 Anthoceros agrestis HOM05D005519 ORTHO05D006423 3.6e-18 95.9 167 52.7
Eucgr.L00901 Eucalyptus grandis HOM05D005519 ORTHO05D006423 5.7e-16 88.6 142 54.9
SMO139G0065 Selaginella moellendorffii HOM05D005519 ORTHO05D006423 7.5e-16 88.2 167 52.1
CBR_g32244 Chara braunii HOM05D005519 ORTHO05D006423 2.8e-15 86.3 69 60.9
CSS0025090 Camellia sinensis var. sinensis HOM05D005519 ORTHO05D006423 3.7e-15 85.9 50 78.0
Cre06.g251150 Chlamydomonas reinhardtii HOM05D005519 ORTHO05D006423 4.8e-15 85.5 85 52.9
MCO05G699 Micromonas commoda HOM05D005519 ORTHO05D006423 8.2e-15 84.7 69 58.0
Pp3c2_26700 Physcomitrium patens HOM05D005519 ORTHO05D006423 3.7e-07 59.3 109 49.5


User provided reference genes

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