Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN27G0418 Fragaria x ananassa HOM05D005693 ORTHO05D006826 4.1e-105 384.8 202 100.0
FvH4_6g22170 Fragaria vesca HOM05D005693 ORTHO05D006826 6.8e-84 314.3 165 97.0
Prupe.7G077600 Prunus persica HOM05D005693 ORTHO05D006826 1.2e-67 260.4 178 78.7
RcHm_v2.0_Chr3g0479521 Rosa chinensis HOM05D005693 ORTHO05D006826 1.7e-66 256.5 179 80.4
FAN25G3535 Fragaria x ananassa HOM05D011417 ORTHO05D006826 7.8e-64 247.7 155 86.5
MD14G1055100 Malus domestica HOM05D005693 ORTHO05D006826 2.5e-62 242.7 177 73.4
MD12G1056600 Malus domestica HOM05D005693 ORTHO05D006826 7.3e-62 241.1 179 74.3
Haze_20000 Corylus avellana HOM05D005693 ORTHO05D006826 1.8e-52 209.9 186 64.0
Haze_20002 Corylus avellana HOM05D005693 ORTHO05D006826 1.5e-51 206.8 186 63.4
CANSAT64G1199 Cannabis sativa HOM05D005693 ORTHO05D006826 9.2e-49 197.6 185 62.2
CiPaw.09G046600 Carya illinoinensis HOM05D005693 ORTHO05D006826 7.8e-48 194.5 186 59.7
COL.COLO4_33976 Corchorus olitorius HOM05D005693 ORTHO05D006826 1.2e-43 180.6 182 57.1
TWI53G1089 Tripterygium wilfordii HOM05D005693 ORTHO05D006826 1.2e-43 180.6 181 58.0
Manes.09G035800 Manihot esculenta HOM05D005693 ORTHO05D006826 2.6e-43 179.5 186 57.0
Duzib128G0858 Durio zibethinus HOM05D005693 ORTHO05D006826 7.6e-43 177.9 185 56.2
Gohir.A01G191200 Gossypium hirsutum HOM05D005693 ORTHO05D006826 9.9e-43 177.6 183 57.9
ClCG10G017580 Citrullus lanatus HOM05D005693 ORTHO05D006826 1.7e-42 176.8 185 55.7
THA.LOC104799293 Tarenaya hassleriana HOM05D005693 ORTHO05D006826 1.7e-42 176.8 182 55.5
Thecc.05G172100 Theobroma cacao HOM05D005693 ORTHO05D006826 1.7e-42 176.8 185 55.7
TAR623G1103 Trochodendron aralioides HOM05D005693 ORTHO05D006826 1.7e-42 176.8 173 57.2
Gohir.D01G178700 Gossypium hirsutum HOM05D005693 ORTHO05D006826 4.9e-42 175.3 183 57.4
Gorai.002G224200 Gossypium raimondii HOM05D005693 ORTHO05D006826 8.4e-42 174.5 183 56.8
Dinv24066 Davidia involucrata HOM05D005693 ORTHO05D006826 1.4e-41 173.7 174 56.9
Cpa.g.sc85.51 Carica papaya HOM05D005693 ORTHO05D006826 1.9e-41 173.3 182 57.1
CsaV3_3G038750 Cucumis sativus L. HOM05D005693 ORTHO05D006826 2.4e-41 172.9 184 54.3
MELO3C009620.2 Cucumis melo HOM05D005693 ORTHO05D006826 3.2e-41 172.6 175 56.6
BcaC05g29290 Brassica carinata HOM05D005693 ORTHO05D006826 1.2e-40 170.6 171 59.6
BolC5t34239H Brassica oleracea HOM05D005693 ORTHO05D006826 1.2e-40 170.6 171 59.6
GSVIVG01033491001 Vitis vinifera HOM05D005693 ORTHO05D006826 1.2e-40 170.6 175 56.6
BraA05t22521Z Brassica rapa HOM05D005693 ORTHO05D006826 1.6e-40 170.2 172 58.7
BcaB06g25545 Brassica carinata HOM05D005693 ORTHO05D006826 2.1e-40 169.9 174 59.2
Atru.chr8.1120 Acer truncatum HOM05D005693 ORTHO05D006826 4.6e-40 168.7 184 56.0
Sed0000696 Sechium edule HOM05D005693 ORTHO05D006826 4.6e-40 168.7 177 54.2
Aa31LG3G6280 Aethionema arabicum HOM05D005693 ORTHO05D006826 6.0e-40 168.3 175 59.4
Aqoxy1G00128 Aquilegia oxysepala HOM05D005693 ORTHO05D006826 6.0e-40 168.3 174 56.9
AL3G23730 Arabidopsis lyrata HOM05D005693 ORTHO05D006826 6.0e-40 168.3 177 58.8
A05p37250 Brassica napus HOM05D005693 ORTHO05D006826 1.0e-39 167.5 171 57.9
Sc19g0006040 Simmondsia chinensis HOM05D005693 ORTHO05D006826 1.3e-39 167.2 144 63.2
AT3G12100 Arabidopsis thaliana HOM05D005693 ORTHO05D006826 2.3e-39 166.4 175 57.1
Potri.016G045200 Populus trichocarpa HOM05D005693 ORTHO05D006826 2.3e-39 166.4 170 56.5
Carub.0003s1144 Capsella rubella HOM05D005693 ORTHO05D006826 3.0e-39 166.0 177 59.3
CARHR086660 Cardamine hirsuta HOM05D005693 ORTHO05D006826 3.0e-39 166.0 178 59.6
Thhalv10020889m.g Eutrema salsugineum HOM05D005693 ORTHO05D006826 3.0e-39 166.0 175 58.3
C05p55720 Brassica napus HOM05D005693 ORTHO05D006826 3.9e-39 165.6 173 59.0
Sp3g10330 Schrenkiella parvula HOM05D005693 ORTHO05D006826 5.1e-39 165.2 175 58.3
Nitab4.5_0004458g0020 Nicotiana tabacum HOM05D005693 ORTHO05D006826 6.6e-39 164.9 169 56.2
Eucgr.A02454 Eucalyptus grandis HOM05D005693 ORTHO05D006826 8.7e-39 164.5 160 60.6
PSO339G5051 Papaver somniferum HOM05D005693 ORTHO05D006826 8.7e-39 164.5 169 54.4
PGR004G1521 Punica granatum HOM05D005693 ORTHO05D006826 1.5e-38 163.7 181 53.6
Actinidia32396 Actinidia chinensis HOM05D005693 ORTHO05D006826 2.5e-38 162.9 152 57.9
TPR.G18210 Trifolium pratense HOM05D005693 ORTHO05D006826 4.3e-38 162.2 187 56.7
Lju124A25T35 Lonicera japonica HOM05D005693 ORTHO05D006826 5.6e-38 161.8 170 55.9
Sabra16G0049200 Salix brachista HOM05D005693 ORTHO05D006826 5.6e-38 161.8 171 54.4
Ah.13g075810 Amaranthus hybridus HOM05D005693 ORTHO05D006826 7.3e-38 161.4 197 54.3
Nitab4.5_0001137g0070 Nicotiana tabacum HOM05D005693 ORTHO05D006826 7.3e-38 161.4 169 55.6
PGSC0003DMG400014975 Solanum tuberosum HOM05D005693 ORTHO05D006826 7.3e-38 161.4 163 55.8
Psat3g068360 Pisum sativum HOM05D005693 ORTHO05D006826 1.6e-37 160.2 158 60.1
Sopen03g015940 Solanum pennellii HOM05D005693 ORTHO05D006826 1.6e-37 160.2 163 55.8
EL10Ac3g06910 Beta vulgaris HOM05D005693 ORTHO05D006826 2.1e-37 159.8 180 53.9
Hma1.2p1_0648F.1_g195113 Hydrangea macrophylla HOM05D005693 ORTHO05D006826 2.8e-37 159.5 154 55.8
Ciclev10011987m.g Citrus clementina HOM05D005693 ORTHO05D006826 3.6e-37 159.1 177 58.2
Cc06_g15820 Coffea canephora HOM05D005693 ORTHO05D006826 8.1e-37 157.9 156 55.8
Medtr7g093290 Medicago truncatula HOM05D005693 ORTHO05D006826 1.1e-36 157.5 159 58.5
MSTRG.6485 Avicennia marina HOM05D005693 ORTHO05D006826 1.4e-36 157.1 156 58.3
CSS0003318 Camellia sinensis var. sinensis HOM05D005693 ORTHO05D006826 1.8e-36 156.8 174 54.6
CSS0050183 Camellia sinensis var. sinensis HOM05D005693 ORTHO05D006826 1.8e-36 156.8 174 54.6
Solyc03g063320.3 Solanum lycopersicum HOM05D005693 ORTHO05D006826 1.8e-36 156.8 162 54.9
DCAR_013542 Daucus carota HOM05D005693 ORTHO05D006826 2.4e-36 156.4 196 51.5
AUR62015362 Chenopodium quinoa HOM05D005693 ORTHO05D006826 4.0e-36 155.6 186 52.7
Migut.J01840 Erythranthe guttata HOM05D005693 ORTHO05D006826 1.2e-35 154.1 148 59.5
arahy.Tifrunner.gnm1.ann1.C1QR5S Arachis hypogaea HOM05D005693 ORTHO05D006826 2.0e-35 153.3 164 57.3
arahy.Tifrunner.gnm1.ann1.F8DN54 Arachis hypogaea HOM05D005693 ORTHO05D006826 2.0e-35 153.3 164 57.3
Hund24794 Selenicereus undatus HOM05D005693 ORTHO05D006826 2.0e-35 153.3 186 53.8
AUR62012025 Chenopodium quinoa HOM05D005693 ORTHO05D006826 5.8e-35 151.8 185 51.4
Lj1g0019099 Lotus japonicus HOM05D005693 ORTHO05D006826 8.4e-34 147.9 160 54.4
Lalb_Chr18g0047901 Lupinus albus HOM05D005693 ORTHO05D006826 1.1e-33 147.5 187 52.4
CDE05G1621 Ceratophyllum demersum HOM05D005693 ORTHO05D006826 4.2e-33 145.6 149 55.7
SalBow6G0162 Salvia bowleyana HOM05D005693 ORTHO05D006826 5.4e-33 145.2 150 59.3
vmacro07901 Vaccinium macrocarpon HOM05D005693 ORTHO05D006826 9.3e-33 144.4 189 51.3
CAN.G87.1 Capsicum annuum HOM05D005693 ORTHO05D006826 2.1e-32 143.3 188 51.1
Oeu063873.1 Olea europaea HOM05D005693 ORTHO05D006826 2.7e-32 142.9 168 53.6
Glyma.19G148200 Glycine max HOM05D005693 ORTHO05D006826 2.3e-31 139.8 147 57.8
Phvul.001G142750 Phaseolus vulgaris HOM05D005693 ORTHO05D006826 2.3e-31 139.8 150 57.3
VMungo1383G3018 Vigna mungo HOM05D005693 ORTHO05D006826 2.3e-31 139.8 150 56.7
RcHm_v2.0_Chr2g0145321 Rosa chinensis HOM05D005693 ORTHO05D006826 3.0e-31 139.4 73 94.5
ATR0807G195 Amborella trichopoda HOM05D005693 ORTHO05D006826 5.1e-31 138.7 156 53.8
Glyma.03G145200 Glycine max HOM05D005693 ORTHO05D006826 1.1e-30 137.5 150 55.3
Zm00001eb190540 Zea mays HOM05D005693 ORTHO05D006826 2.5e-30 136.3 157 54.1
Lsat_1_v5_gn_8_75420 Lactuca sativa HOM05D005693 ORTHO05D006826 5.6e-30 135.2 167 49.7
Peaxi162Scf00258g00724 Petunia axillaris HOM05D005693 ORTHO05D006826 5.6e-30 135.2 147 55.8
Manes.11G017601 Manihot esculenta HOM05D005693 ORTHO05D006826 2.1e-29 133.3 89 75.3
Manes.17G026624 Manihot esculenta HOM05D005693 ORTHO05D006826 2.1e-29 133.3 89 75.3
HanXRQChr05g0132951 Helianthus annuus HOM05D005693 ORTHO05D006826 3.6e-29 132.5 172 49.4
Ca_08527_v3 Cicer arietinum L. HOM05D005693 ORTHO05D006826 4.8e-29 132.1 152 53.9
PSO384G0754 Papaver somniferum HOM05D005693 ORTHO05D006826 1.1e-28 131.0 77 81.8
Nn7g36005 Nelumbo nucifera HOM05D005693 ORTHO05D006826 1.8e-28 130.2 164 48.2
QL93p0118_0004 Quercus lobata HOM05D005693 ORTHO05D006826 9.9e-27 124.4 138 56.5
QL07p023907 Quercus lobata HOM05D005693 ORTHO05D006826 2.9e-26 122.9 138 55.8
SGA_v2.0_scaffold69G23060 Striga asiatica HOM05D005693 ORTHO05D006826 4.9e-26 122.1 174 43.7
unitig_744.g24644 Utricularia gibba HOM05D001741 ORTHO05D002196 3.5e-24 115.9 167 46.7
ECA236G1678 Erigeron canadensis HOM05D005693 ORTHO05D006826 7.9e-24 114.8 72 79.2
SEGI_14579 Sequoiadendron giganteum HOM05D005693 ORTHO05D006826 3.9e-23 112.5 241 35.7
HPP92_009025 Vanilla planifolia HOM05D005693 ORTHO05D006826 5.1e-23 112.1 182 42.3
HPP92_009079 Vanilla planifolia HOM05D005693 ORTHO05D006826 5.1e-23 112.1 182 42.3
Atru.chr5.2645 Acer truncatum HOM05D005693 ORTHO05D006826 1.8e-20 103.6 160 46.2
Atru.chr9.1297 Acer truncatum HOM05D005693 ORTHO05D006826 1.8e-20 103.6 160 46.2
SMO196G0199 Selaginella moellendorffii HOM05D005693 ORTHO05D006826 4.0e-20 102.4 68 73.5
Pp3c19_16310 Physcomitrium patens HOM05D005693 ORTHO05D006826 2.6e-19 99.8 74 63.5
Duzib093G0150 Durio zibethinus HOM05D005693 ORTHO05D006826 4.5e-19 99.0 157 42.0
AagrBONN_evm.TU.Sc2ySwM_368.2514 Anthoceros agrestis HOM05D005693 ORTHO05D006826 1.3e-18 97.4 208 38.9
Mapoly0031s0152 Marchantia polymorpha HOM05D005693 ORTHO05D006826 2.2e-18 96.7 77 59.7
CBR_g23093 Chara braunii HOM05D005693 ORTHO05D006826 1.6e-16 90.5 64 67.2
Glyma.14G019600 Glycine max HOM05D005693 ORTHO05D006826 4.6e-16 89.0 58 77.6
Lsat_1_v5_gn_8_18181 Lactuca sativa HOM05D005693 ORTHO05D006826 4.6e-16 89.0 60 80.0
CDE05G0078 Ceratophyllum demersum HOM05D005693 ORTHO05D006826 7.9e-16 88.2 116 47.4
HanXRQChr08g0219081 Helianthus annuus HOM05D005693 ORTHO05D006826 5.1e-15 85.5 61 73.8
QL07p023915 Quercus lobata HOM05D005693 ORTHO05D006826 8.2e-13 78.2 37 94.6
QL93p0118_0012 Quercus lobata HOM05D005693 ORTHO05D006826 8.2e-13 78.2 37 94.6
arahy.Tifrunner.gnm1.ann1.WY0JR2 Arachis hypogaea HOM05D005693 ORTHO05D015958 1.1e-12 77.8 54 72.2


User provided reference genes

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