Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN27G0228 Fragaria x ananassa HOM05D006958 ORTHO05D008814 6.1e-194 680.6 341 100.0
FAN15G0662 Fragaria x ananassa HOM05D006958 ORTHO05D008814 7.7e-189 663.7 337 97.9
FAN24G2490 Fragaria x ananassa HOM05D006958 ORTHO05D008814 2.1e-186 655.6 341 96.5
FvH4_2g33060 Fragaria vesca HOM05D006958 ORTHO05D008814 6.3e-183 644.0 341 95.6
FAN20G1263 Fragaria x ananassa HOM05D006958 ORTHO05D008814 6.3e-183 644.0 353 93.2
RcHm_v2.0_Chr6g0309651 Rosa chinensis HOM05D006958 ORTHO05D008814 5.3e-174 614.4 342 90.1
Prupe.1G422600 Prunus persica HOM05D006958 ORTHO05D008814 4.9e-143 511.5 349 73.9
MD15G1069100 Malus domestica HOM05D006958 ORTHO05D008814 6.8e-137 491.1 349 72.2
Thecc.08G088500 Theobroma cacao HOM05D006958 ORTHO05D008814 5.8e-128 461.5 344 66.3
Atru.chr13.835 Acer truncatum HOM05D006958 ORTHO05D008814 2.1e-125 453.0 346 65.9
Manes.18G046700 Manihot esculenta HOM05D006958 ORTHO05D008814 2.7e-125 452.6 348 66.4
CANSAT25G3409 Cannabis sativa HOM05D006958 ORTHO05D008814 1.7e-124 449.9 347 66.0
Ciclev10001733m.g Citrus clementina HOM05D006958 ORTHO05D008814 3.9e-124 448.7 340 64.7
COL.COLO4_28503 Corchorus olitorius HOM05D006958 ORTHO05D008814 3.3e-123 445.7 344 64.2
Duzib093G1923 Durio zibethinus HOM05D006958 ORTHO05D008814 1.4e-121 440.3 344 64.2
Dinv39219 Davidia involucrata HOM05D006958 ORTHO05D008814 5.2e-121 438.3 351 65.2
Potri.002G118300 Populus trichocarpa HOM05D006958 ORTHO05D008814 1.2e-120 437.2 345 64.1
ClCG08G016520 Citrullus lanatus HOM05D006958 ORTHO05D008814 7.6e-120 434.5 345 62.6
TWI12G1073 Tripterygium wilfordii HOM05D006958 ORTHO05D008814 7.6e-120 434.5 351 62.1
Gorai.009G220300 Gossypium raimondii HOM05D006958 ORTHO05D008814 1.7e-119 433.3 344 62.5
Haze_22433 Corylus avellana HOM05D006958 ORTHO05D008814 8.4e-119 431.0 348 62.6
Cfa013775 Carpinus fangiana HOM05D006958 ORTHO05D008814 1.4e-118 430.3 349 62.2
TAR376G0445 Trochodendron aralioides HOM05D006958 ORTHO05D008814 3.2e-118 429.1 358 60.9
Gohir.D05G213600 Gossypium hirsutum HOM05D006958 ORTHO05D008814 5.4e-118 428.3 346 61.8
CiPaw.07G174600 Carya illinoinensis HOM05D006958 ORTHO05D008814 9.3e-118 427.6 351 63.2
Actinidia10201 Actinidia chinensis HOM05D006958 ORTHO05D008814 2.1e-117 426.4 349 62.8
CSS0020437 Camellia sinensis var. sinensis HOM05D006958 ORTHO05D008814 3.9e-116 422.2 346 63.0
Sed0002112 Sechium edule HOM05D006958 ORTHO05D008814 1.9e-115 419.9 344 61.3
THA.LOC104816754 Tarenaya hassleriana HOM05D006958 ORTHO05D008814 2.5e-115 419.5 339 61.9
CsaV3_2G026090 Cucumis sativus L. HOM05D006958 ORTHO05D008814 4.3e-115 418.7 346 61.0
Rhsim06G0062400 Rhododendron simsii HOM05D006958 ORTHO05D008814 7.3e-115 417.9 350 61.4
QL12p038133 Quercus lobata HOM05D006958 ORTHO05D008814 2.8e-114 416.0 349 60.7
Actinidia22696 Actinidia chinensis HOM05D006958 ORTHO05D008814 1.1e-113 414.1 347 61.4
MELO3C010802.2 Cucumis melo HOM05D006958 ORTHO05D008814 2.0e-112 409.8 346 60.1
CSS0026693 Camellia sinensis var. sinensis HOM05D006958 ORTHO05D008814 4.9e-111 405.2 346 61.8
PGR031G1511 Punica granatum HOM05D006958 ORTHO05D008814 4.9e-111 405.2 343 59.2
Lalb_Chr14g0368181 Lupinus albus HOM05D006958 ORTHO05D008814 1.4e-110 403.7 342 60.2
AT1G59600 Arabidopsis thaliana HOM05D006958 ORTHO05D008814 9.3e-110 401.0 338 60.7
Thhalv10023590m.g Eutrema salsugineum HOM05D006958 ORTHO05D008814 9.3e-110 401.0 340 59.7
CARHR283790 Cardamine hirsuta HOM05D006958 ORTHO05D008814 4.6e-109 398.7 342 60.2
Eucgr.F02250 Eucalyptus grandis HOM05D006958 ORTHO05D008814 7.9e-109 397.9 350 56.0
AL2G17470 Arabidopsis lyrata HOM05D006958 ORTHO05D008814 1.5e-107 393.7 338 60.1
Carub.0002s0585 Capsella rubella HOM05D006958 ORTHO05D008814 5.6e-107 391.7 338 59.8
arahy.Tifrunner.gnm1.ann1.JFD9T8 Arachis hypogaea HOM05D006958 ORTHO05D008814 1.4e-105 387.1 337 59.1
Cpa.g.sc142.28 Carica papaya HOM05D006958 ORTHO05D008814 2.4e-105 386.3 278 67.3
C01p36350 Brassica napus HOM05D006958 ORTHO05D008814 1.2e-104 384.0 334 57.8
Sopen04g031420 Solanum pennellii HOM05D006958 ORTHO05D008814 2.0e-104 383.3 345 60.3
BolC1t03593H Brassica oleracea HOM05D006958 ORTHO05D008814 1.3e-103 380.6 335 57.9
Sp2g04980 Schrenkiella parvula HOM05D006958 ORTHO05D008814 1.7e-103 380.2 341 56.6
Solyc04g077820.4 Solanum lycopersicum HOM05D006958 ORTHO05D008814 4.9e-103 378.6 343 59.5
Nitab4.5_0002484g0050 Nicotiana tabacum HOM05D006958 ORTHO05D008814 6.4e-103 378.3 343 58.0
Sc02g0007890 Simmondsia chinensis HOM05D006958 ORTHO05D008814 1.4e-102 377.1 341 58.4
Gohir.A05G210300 Gossypium hirsutum HOM05D006958 ORTHO05D008814 1.9e-102 376.7 279 65.9
PGSC0003DMG400010608 Solanum tuberosum HOM05D006958 ORTHO05D008814 4.2e-102 375.6 352 57.7
Nitab4.5_0004654g0020 Nicotiana tabacum HOM05D006958 ORTHO05D008814 7.1e-102 374.8 343 57.7
A01p28700 Brassica napus HOM05D006958 ORTHO05D008814 2.1e-101 373.2 334 56.3
BraA01t03033Z Brassica rapa HOM05D006958 ORTHO05D008814 7.9e-101 371.3 334 56.0
CAN.G724.27 Capsicum annuum HOM05D006958 ORTHO05D008814 7.9e-101 371.3 336 57.7
MBI16_g23890_MAGBIO Magnolia biondii HOM05D006958 ORTHO05D008814 1.3e-100 370.5 354 56.2
Aa31LG2G10550 Aethionema arabicum HOM05D006958 ORTHO05D008814 1.8e-100 370.2 430 48.4
Lj4A758G77 Lonicera japonica HOM05D006958 ORTHO05D008814 8.7e-100 367.9 385 51.9
Migut.N02783 Erythranthe guttata HOM05D006958 ORTHO05D008814 2.5e-99 366.3 341 55.7
SGA_v2.0_scaffold28G11833 Striga asiatica HOM05D006958 ORTHO05D008814 4.3e-99 365.5 341 56.3
Glyma.14G089018 Glycine max HOM05D006958 ORTHO05D008814 2.8e-98 362.8 335 60.3
Lj5g0000926 Lotus japonicus HOM05D006958 ORTHO05D008814 3.1e-97 359.4 341 55.7
BcaB04g20216 Brassica carinata HOM05D006958 ORTHO05D008814 5.3e-97 358.6 342 55.8
TPR.G37796 Trifolium pratense HOM05D006958 ORTHO05D008814 2.6e-96 356.3 341 56.3
HanXRQChr08g0229631 Helianthus annuus HOM05D006958 ORTHO05D008814 5.8e-96 355.1 350 55.1
Hund05299 Selenicereus undatus HOM05D006958 ORTHO05D008814 1.3e-95 354.0 351 55.3
MSTRG.24376 Avicennia marina HOM05D006958 ORTHO05D008814 1.7e-95 353.6 342 55.0
Ca_13215_v3 Cicer arietinum L. HOM05D006958 ORTHO05D008814 3.8e-95 352.4 347 55.0
Lsat_1_v5_gn_6_110920 Lactuca sativa HOM05D006958 ORTHO05D008814 1.1e-94 350.9 348 53.4
arahy.Tifrunner.gnm1.ann1.8TQ0W2 Arachis hypogaea HOM05D006958 ORTHO05D008814 4.2e-94 349.0 337 56.1
Peaxi162Scf00081g02114 Petunia axillaris HOM05D006958 ORTHO05D008814 6.0e-93 345.1 346 54.0
Phvul.001G028000 Phaseolus vulgaris HOM05D006958 ORTHO05D008814 1.3e-92 344.0 330 54.8
VMungo0647G0836 Vigna mungo HOM05D006958 ORTHO05D008814 2.3e-92 343.2 311 57.6
Aqoxy6G02602 Aquilegia oxysepala HOM05D006958 ORTHO05D008814 4.8e-90 335.5 356 50.8
PSO541G2153 Papaver somniferum HOM05D006958 ORTHO05D008814 1.1e-89 334.3 352 49.7
Medtr1g018000 Medicago truncatula HOM05D006958 ORTHO05D008814 1.8e-89 333.6 354 53.1
EL10Ac1g02379 Beta vulgaris HOM05D006958 ORTHO05D008814 9.0e-89 331.3 278 58.6
PSO675G0096 Papaver somniferum HOM05D006958 ORTHO05D008814 1.2e-88 330.9 355 49.0
ECA246G2880 Erigeron canadensis HOM05D006958 ORTHO05D008814 5.5e-86 322.0 286 57.3
ATR0739G011 Amborella trichopoda HOM05D006958 ORTHO05D008814 2.1e-85 320.1 356 52.0
PSO541G3524 Papaver somniferum HOM05D006958 ORTHO05D008814 3.6e-85 319.3 310 54.5
unitig_744.g24127 Utricularia gibba HOM05D006958 ORTHO05D008814 5.1e-84 315.5 334 50.6
DCAR_020049 Daucus carota HOM05D006958 ORTHO05D008814 1.5e-80 303.9 344 49.7
HPP92_009523 Vanilla planifolia HOM05D006958 ORTHO05D008814 5.5e-78 295.4 328 50.3
Zm00001eb325900 Zea mays HOM05D006958 ORTHO05D008814 1.3e-74 284.3 339 44.8
GSVIVG01009341001 Vitis vinifera HOM05D006958 ORTHO05D008814 2.8e-74 283.1 216 66.2
Cc10_g05800 Coffea canephora HOM05D006958 ORTHO05D008814 1.0e-68 264.6 216 63.4
CDE04G0359 Ceratophyllum demersum HOM05D006958 ORTHO05D008814 4.8e-58 229.2 250 50.8
Pp3c12_1620 Physcomitrium patens HOM05D006958 ORTHO05D008814 3.4e-51 206.5 296 39.2
Psat6g018160 Pisum sativum HOM05D006958 ORTHO05D008814 2.7e-48 196.8 300 44.3
Oeu049903.1 Olea europaea HOM05D006958 ORTHO05D008814 3.6e-45 186.4 170 54.7
AUR62022479 Chenopodium quinoa HOM05D006958 ORTHO05D008814 8.0e-45 185.3 175 53.7
arahy.Tifrunner.gnm1.ann1.D1UQZZ Arachis hypogaea HOM05D006958 ORTHO05D008814 2.4e-41 173.7 283 40.3
HPP92_009559 Vanilla planifolia HOM05D006958 ORTHO05D008814 2.5e-38 163.7 177 51.4
Os01g0593100 Oryza sativa ssp. japonica HOM05D006958 ORTHO05D008814 2.9e-34 150.2 198 43.9
SMO334G0101 Selaginella moellendorffii HOM05D006958 ORTHO05D008814 1.7e-31 141.0 268 32.8
BolC4t24190H Brassica oleracea HOM05D006958 ORTHO05D008814 3.9e-31 139.8 135 58.5
Os07g0586000 Oryza sativa ssp. japonica HOM05D006958 ORTHO05D008814 5.6e-30 136.0 169 43.8
CBR_g51257 Chara braunii HOM05D006958 ORTHO05D008814 2.1e-29 134.0 322 31.1
Cfa010280 Carpinus fangiana HOM05D006958 ORTHO05D008814 4.0e-28 129.8 88 70.5
SEGI_02529 Sequoiadendron giganteum HOM05D006958 ORTHO05D008814 6.8e-28 129.0 162 40.7
C04p26140 Brassica napus HOM05D006958 ORTHO05D008814 8.3e-26 122.1 120 55.8
AUR62022480 Chenopodium quinoa HOM05D006958 ORTHO05D008814 1.4e-25 121.3 128 47.7
BcaC02g10644 Brassica carinata HOM05D006958 ORTHO05D008814 2.4e-25 120.6 152 46.1
MBI15_g25904_MAGBIO Magnolia biondii HOM05D006958 ORTHO05D017181 2.3e-23 114.0 124 50.8
SEGI_26692 Sequoiadendron giganteum HOM05D006958 ORTHO05D008814 4.9e-18 96.3 88 47.7
Psat7g107960 Pisum sativum HOM05D006958 ORTHO05D008814 2.1e-16 90.9 108 45.4
Glyma.07G264001 Glycine max HOM05D006958 ORTHO05D008814 3.1e-12 77.0 78 52.6
Ah.09g227430 Amaranthus hybridus HOM05D006958 ORTHO05D008814 3.0e-07 60.5 64 51.6
Psat0s3396g0160 Pisum sativum HOM05D006958 ORTHO05D008814 2.5e-06 57.4 39 61.5


User provided reference genes

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