Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN27G0211 Fragaria x ananassa HOM05D006061 ORTHO05D007450 0.0e+00 1189.9 623 100.0
FvH4_2g19870 Fragaria vesca HOM05D006061 ORTHO05D007450 2.9e-274 948.3 622 84.4
RcHm_v2.0_Chr6g0285561 Rosa chinensis HOM05D006061 ORTHO05D007450 3.3e-238 828.6 625 72.0
Prupe.8G209500 Prunus persica HOM05D006061 ORTHO05D007450 1.5e-198 696.8 626 62.3
MD10G1171000 Malus domestica HOM05D006061 ORTHO05D007450 8.8e-183 644.4 626 59.3
FAN15G2648 Fragaria x ananassa HOM05D006061 ORTHO05D007450 1.6e-176 623.6 429 80.4
Cfa002517 Carpinus fangiana HOM05D006061 ORTHO05D007450 1.3e-165 587.4 620 54.0
Atru.chr5.1926 Acer truncatum HOM05D006061 ORTHO05D007450 9.2e-156 554.7 621 52.7
Duzib138G1183 Durio zibethinus HOM05D006061 ORTHO05D007450 9.2e-156 554.7 616 52.4
Thecc.01G244800 Theobroma cacao HOM05D006061 ORTHO05D007450 2.7e-155 553.1 620 52.6
Potri.014G194800 Populus trichocarpa HOM05D006061 ORTHO05D007450 8.6e-154 548.1 622 50.5
TAR365G1230 Trochodendron aralioides HOM05D006061 ORTHO05D007450 4.0e-151 539.3 637 48.4
Ciclev10019392m.g Citrus clementina HOM05D006061 ORTHO05D007450 1.0e-146 524.6 617 50.6
Haze_24749 Corylus avellana HOM05D006061 ORTHO05D007450 9.5e-145 518.1 673 47.7
CsaV3_7G025440 Cucumis sativus L. HOM05D006061 ORTHO05D007450 8.1e-144 515.0 623 48.5
Lj1g0026990 Lotus japonicus HOM05D006061 ORTHO05D007450 5.2e-143 512.3 617 48.9
Gorai.007G151600 Gossypium raimondii HOM05D006061 ORTHO05D007450 2.6e-142 510.0 619 49.4
CANSAT01G1389 Cannabis sativa HOM05D006061 ORTHO05D007450 2.9e-141 506.5 610 50.0
TWI59G0704 Tripterygium wilfordii HOM05D006061 ORTHO05D007450 6.4e-141 505.4 618 49.2
Gohir.A11G135100 Gossypium hirsutum HOM05D006061 ORTHO05D007450 1.4e-140 504.2 622 49.7
Eucgr.H00824 Eucalyptus grandis HOM05D006061 ORTHO05D007450 3.2e-140 503.1 616 49.2
Gohir.D11G141300 Gossypium hirsutum HOM05D006061 ORTHO05D007450 2.7e-139 500.0 622 49.2
Phvul.001G168300 Phaseolus vulgaris HOM05D006061 ORTHO05D007450 4.6e-139 499.2 617 48.5
ClCG09G009420 Citrullus lanatus HOM05D006061 ORTHO05D007450 7.8e-139 498.4 623 47.5
COL.COLO4_08163 Corchorus olitorius HOM05D006061 ORTHO05D007450 1.7e-138 497.3 641 47.1
Glyma.03G169900 Glycine max HOM05D006061 ORTHO05D007450 6.6e-138 495.4 615 48.0
arahy.Tifrunner.gnm1.ann1.4WTK5H Arachis hypogaea HOM05D006061 ORTHO05D007450 1.1e-137 494.6 619 46.7
arahy.Tifrunner.gnm1.ann1.J8EIPB Arachis hypogaea HOM05D006061 ORTHO05D007450 1.1e-137 494.6 619 46.7
GSVIVG01028489001 Vitis vinifera HOM05D006061 ORTHO05D007450 1.5e-137 494.2 606 48.5
Glyma.19G171100 Glycine max HOM05D006061 ORTHO05D007450 1.6e-136 490.7 606 47.7
Ca_08767_v3 Cicer arietinum L. HOM05D006061 ORTHO05D007450 8.1e-136 488.4 626 47.1
Actinidia30104 Actinidia chinensis HOM05D006061 ORTHO05D007450 1.8e-135 487.3 617 45.9
PGR083G1193 Punica granatum HOM05D006061 ORTHO05D007450 1.8e-135 487.3 609 47.3
Sabra14G0142900 Salix brachista HOM05D006061 ORTHO05D007450 4.0e-135 486.1 587 48.0
CiPaw.04G108700 Carya illinoinensis HOM05D006061 ORTHO05D007450 1.2e-134 484.6 536 52.8
THA.LOC104814544 Tarenaya hassleriana HOM05D006061 ORTHO05D007450 2.1e-128 463.8 615 45.5
Nn1g03086 Nelumbo nucifera HOM05D006061 ORTHO05D007450 8.1e-128 461.8 634 44.5
Psat3g050240 Pisum sativum HOM05D006061 ORTHO05D007450 8.1e-128 461.8 621 45.6
Sc05g0002480 Simmondsia chinensis HOM05D006061 ORTHO05D007450 2.4e-127 460.3 613 45.4
PGSC0003DMG401020085 Solanum tuberosum HOM05D006061 ORTHO05D007450 3.4e-126 456.4 642 44.2
MBI07_g08916_MAGBIO Magnolia biondii HOM05D006061 ORTHO05D007450 8.4e-125 451.8 638 42.5
TPR.G7560 Trifolium pratense HOM05D006061 ORTHO05D007450 1.4e-124 451.1 624 45.4
Sopen06g035030 Solanum pennellii HOM05D006061 ORTHO05D007450 1.9e-124 450.7 642 43.8
AUR62008856 Chenopodium quinoa HOM05D006061 ORTHO05D007450 5.4e-124 449.1 633 44.1
Solyc06g083640.4 Solanum lycopersicum HOM05D006061 ORTHO05D007450 1.6e-123 447.6 642 43.5
Lj1A80G16 Lonicera japonica HOM05D006061 ORTHO05D007450 8.7e-122 441.8 623 42.9
Medtr7g099450 Medicago truncatula HOM05D006061 ORTHO05D007450 8.7e-122 441.8 618 44.8
Peaxi162Scf00517g00313 Petunia axillaris HOM05D006061 ORTHO05D007450 1.6e-120 437.6 637 43.2
Aqoxy5G00054 Aquilegia oxysepala HOM05D006061 ORTHO05D007450 2.4e-119 433.7 639 41.9
CAN.G771.51 Capsicum annuum HOM05D006061 ORTHO05D007450 1.7e-117 427.6 656 41.9
Nitab4.5_0002085g0150 Nicotiana tabacum HOM05D006061 ORTHO05D007450 2.2e-117 427.2 638 42.3
PSO170G3920 Papaver somniferum HOM05D006061 ORTHO05D007450 8.4e-117 425.2 635 40.8
Nitab4.5_0006211g0030 Nicotiana tabacum HOM05D006061 ORTHO05D007450 7.1e-116 422.2 638 41.7
SalBow6G4925 Salvia bowleyana HOM05D006061 ORTHO05D007450 3.5e-115 419.9 635 40.3
EL10Ac7g17761 Beta vulgaris HOM05D006061 ORTHO05D007450 7.9e-115 418.7 646 41.3
Hund05498 Selenicereus undatus HOM05D006061 ORTHO05D007450 1.3e-114 417.9 636 41.8
SGA_v2.0_scaffold3G01591 Striga asiatica HOM05D006061 ORTHO05D007450 1.5e-113 414.5 640 40.9
Ah.15g093400 Amaranthus hybridus HOM05D006061 ORTHO05D007450 1.3e-112 411.4 627 42.4
Migut.N02246 Erythranthe guttata HOM05D006061 ORTHO05D007450 1.3e-112 411.4 635 40.5
Thhalv10001935m.g Eutrema salsugineum HOM05D006061 ORTHO05D007450 1.1e-111 408.3 627 42.1
AT2G20210 Arabidopsis thaliana HOM05D006061 ORTHO05D007450 2.4e-111 407.1 627 42.9
Rhsim13G0041800 Rhododendron simsii HOM05D006061 ORTHO05D000758 5.3e-111 406.0 731 37.3
AL3G47870 Arabidopsis lyrata HOM05D006061 ORTHO05D007450 9.0e-111 405.2 606 41.9
MSTRG.12506 Avicennia marina HOM05D006061 ORTHO05D007450 1.3e-109 401.4 628 40.4
BcaC06g36697 Brassica carinata HOM05D006061 ORTHO05D007450 2.2e-109 400.6 603 42.0
BolC7t40535H Brassica oleracea HOM05D006061 ORTHO05D007450 2.2e-109 400.6 603 42.0
C07p00980 Brassica napus HOM05D006061 ORTHO05D007450 6.4e-109 399.1 603 41.8
Aa31LG8G17130 Aethionema arabicum HOM05D006061 ORTHO05D007450 8.4e-109 398.7 625 42.2
HanXRQChr13g0409031 Helianthus annuus HOM05D006061 ORTHO05D007450 2.4e-108 397.1 621 39.8
Manes.12G040800 Manihot esculenta HOM05D006061 ORTHO05D007450 3.2e-108 396.7 492 49.2
BcaB03g16813 Brassica carinata HOM05D006061 ORTHO05D007450 2.3e-106 390.6 607 40.9
A07p00530 Brassica napus HOM05D006061 ORTHO05D007450 1.3e-104 384.8 608 41.3
BraA07t27847Z Brassica rapa HOM05D006061 ORTHO05D007450 1.6e-104 384.4 607 41.2
Lsat_1_v5_gn_8_90281 Lactuca sativa HOM05D006061 ORTHO05D007450 8.1e-104 382.1 634 39.3
vmacro02729 Vaccinium macrocarpon HOM05D006061 ORTHO05D007450 3.1e-95 353.6 341 56.0
ECA236G2978 Erigeron canadensis HOM05D006061 ORTHO05D000758 3.0e-90 337.0 629 36.7
Cc01_g08490 Coffea canephora HOM05D006061 ORTHO05D007450 1.5e-86 324.7 510 39.6
Sed0025129 Sechium edule HOM05D006061 ORTHO05D007450 4.5e-86 323.2 292 58.9
CSS0041718 Camellia sinensis var. sinensis HOM05D006061 ORTHO05D007450 5.9e-86 322.8 325 53.2
VMungo1383G3365 Vigna mungo HOM05D006061 ORTHO05D007450 3.2e-84 317.0 292 59.6
ATR0787G120 Amborella trichopoda HOM05D006061 ORTHO05D007450 1.2e-83 315.1 663 35.3
Cpa.g.sc8.207 Carica papaya HOM05D006061 ORTHO05D007450 1.4e-82 311.6 253 60.5
AUR62025388 Chenopodium quinoa HOM05D006061 ORTHO05D007450 9.7e-81 305.4 337 50.7
Sp3g33450 Schrenkiella parvula HOM05D006061 ORTHO05D007450 1.1e-79 302.0 453 43.7
Carub.0003s3454 Capsella rubella HOM05D006061 ORTHO05D007450 1.6e-75 288.1 487 40.2
MELO3C024149.2 Cucumis melo HOM05D006061 ORTHO05D007450 6.1e-75 286.2 253 59.7
Lalb_Chr01g0019421 Lupinus albus HOM05D006061 ORTHO05D007450 1.2e-62 245.4 403 37.7
Lalb_Chr01g0019411 Lupinus albus HOM05D006061 ORTHO05D007450 2.2e-56 224.6 195 61.0
CARHR110700 Cardamine hirsuta HOM05D006061 ORTHO05D007450 1.8e-55 221.5 217 55.3
Cpa.g.sc8.208 Carica papaya HOM05D006061 ORTHO05D007450 1.8e-55 221.5 326 42.0
SEGI_05721 Sequoiadendron giganteum HOM05D006061 ORTHO05D007450 8.6e-53 212.6 285 42.5
Oeu039640.1 Olea europaea HOM05D006061 ORTHO05D007450 3.7e-48 197.2 200 49.0
unitig_8.g4624 Utricularia gibba HOM05D006061 ORTHO05D007450 4.1e-47 193.7 276 43.5
Pp3c7_21970 Physcomitrium patens HOM05D006061 ORTHO05D007450 5.7e-41 173.3 664 27.0
VMungo1383G3184 Vigna mungo HOM05D006061 ORTHO05D007450 1.1e-39 169.1 194 47.4
Phvul.004G074200 Phaseolus vulgaris HOM05D006061 ORTHO05D007450 4.1e-31 140.6 138 59.4
Zm00001eb008990 Zea mays HOM05D006061 ORTHO05D007450 6.6e-29 133.3 149 49.0
Oeu039641.2 Olea europaea HOM05D006061 ORTHO05D007450 1.2e-27 129.0 153 42.5
Zm00001eb428270 Zea mays HOM05D006061 ORTHO05D007450 1.8e-26 125.2 170 44.1
DCAR_004700 Daucus carota HOM05D000065 ORTHO05D007450 1.5e-25 122.1 435 28.5
SMO356G0042 Selaginella moellendorffii HOM05D006061 ORTHO05D007450 4.4e-25 120.6 535 24.5
Gorai.008G101100 Gossypium raimondii HOM05D006061 ORTHO05D007450 9.9e-25 119.4 129 51.2
vmacro02728 Vaccinium macrocarpon HOM05D006061 ORTHO05D007450 9.9e-25 119.4 290 30.0
Gohir.D10G064900 Gossypium hirsutum HOM05D006061 ORTHO05D007450 4.1e-23 114.0 125 52.8
Zm00001eb133830 Zea mays HOM05D006061 ORTHO05D007450 4.1e-23 114.0 363 28.7
PSO675G3076 Papaver somniferum HOM05D006061 ORTHO05D007450 1.6e-22 112.1 190 40.0
Cc00_g31740 Coffea canephora HOM05D006061 ORTHO05D007450 4.6e-22 110.5 124 48.4
Zm00001eb120120 Zea mays HOM05D006061 ORTHO05D007450 7.8e-22 109.8 118 52.5
SHI26842 Sapria himalayana HOM05D006061 ORTHO05D007450 2.3e-21 108.2 126 50.0
CBR_g31999 Chara braunii HOM05D006061 ORTHO05D007450 3.9e-21 107.5 278 30.9
Psat1g093320 Pisum sativum HOM05D006061 ORTHO05D007450 7.3e-20 103.2 132 42.4
Psat0ss8385g0040 Pisum sativum HOM05D006061 ORTHO05D007450 1.2e-19 102.4 132 42.4
Rhsim13G0055400 Rhododendron simsii HOM05D006061 ORTHO05D007450 2.8e-19 101.3 124 46.0
Os12g0228900 Oryza sativa ssp. japonica HOM05D006061 ORTHO05D007450 3.6e-19 100.9 231 35.1
Zm00001eb399320 Zea mays HOM05D000103 ORTHO05D007450 1.1e-15 89.4 113 45.1
HPP92_014830 Vanilla planifolia HOM05D006061 ORTHO05D007450 1.4e-15 89.0 147 36.7
SHI26843 Sapria himalayana HOM05D006061 ORTHO05D007450 3.9e-13 80.9 196 31.1
CARHR174390 Cardamine hirsuta HOM05D006061 ORTHO05D007450 3.6e-11 74.3 61 55.7
Zm00001eb068850 Zea mays HOM05D006061 ORTHO05D007450 3.6e-11 74.3 88 47.7
PSO541G3330 Papaver somniferum HOM05D006061 ORTHO05D007450 6.9e-10 70.1 147 34.7
RcHm_v2.0_Chr3g0485191 Rosa chinensis HOM05D006061 ORTHO05D007450 1.5e-09 68.9 45 71.1
RcHm_v2.0_Chr6g0254781 Rosa chinensis HOM05D006061 ORTHO05D007450 1.5e-09 68.9 45 71.1
RcHm_v2.0_Chr7g0210011 Rosa chinensis HOM05D006061 ORTHO05D007450 8.4e-08 63.2 36 75.0


User provided reference genes

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