Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_2g00750 Fragaria vesca HOM05D001705 ORTHO05D008928 4.7e-52 207.6 106 100.0
FAN24G2035 Fragaria x ananassa HOM05D001705 ORTHO05D008928 4.7e-52 207.6 106 100.0
FAN27G0168 Fragaria x ananassa HOM05D001705 ORTHO05D008928 4.7e-52 207.6 106 100.0
RcHm_v2.0_Chr6g0251131 Rosa chinensis HOM05D001705 ORTHO05D008928 1.6e-47 192.6 106 92.5
Prupe.8G006600 Prunus persica HOM05D001705 ORTHO05D008928 7.8e-39 163.7 106 76.4
MD05G1003200 Malus domestica HOM05D001705 ORTHO05D008928 6.6e-38 160.6 106 77.4
CiPaw.03G013900 Carya illinoinensis HOM05D001705 ORTHO05D008928 9.5e-37 156.8 106 74.5
Haze_13961 Corylus avellana HOM05D001705 ORTHO05D008953 2.3e-35 152.1 104 72.1
MD10G1004200 Malus domestica HOM05D001705 ORTHO05D008928 3.0e-35 151.8 106 73.6
QL07p031108 Quercus lobata HOM05D001705 ORTHO05D008928 2.0e-34 149.1 105 71.4
Cfa008073 Carpinus fangiana HOM05D001705 ORTHO05D008928 2.6e-34 148.7 100 74.0
Dinv37409 Davidia involucrata HOM05D001705 ORTHO05D008928 2.6e-34 148.7 106 71.7
Dinv22114 Davidia involucrata HOM05D001705 ORTHO05D008928 9.8e-34 146.7 106 71.7
QL07p047839 Quercus lobata HOM05D001705 ORTHO05D008928 1.3e-33 146.4 105 69.5
CiPaw.10G112700 Carya illinoinensis HOM05D001705 ORTHO05D008928 3.7e-33 144.8 106 68.9
TAR628G0577 Trochodendron aralioides HOM05D001705 ORTHO05D008928 4.9e-33 144.4 105 70.5
Actinidia29374 Actinidia chinensis HOM05D001705 ORTHO05D008928 6.4e-33 144.1 106 69.8
Atru.chr3.1320 Acer truncatum HOM05D001705 ORTHO05D008928 1.8e-32 142.5 106 68.9
Hma1.2p1_0238F.1_g099670 Hydrangea macrophylla HOM05D001705 ORTHO05D008928 2.4e-32 142.1 93 72.0
Glyma.06G321300 Glycine max HOM05D001705 ORTHO05D008928 4.1e-32 141.4 100 72.0
Ciclev10022992m.g Citrus clementina HOM05D001705 ORTHO05D008928 7.0e-32 140.6 106 67.0
Potri.019G070801 Populus trichocarpa HOM05D001705 ORTHO05D008928 7.0e-32 140.6 100 70.0
Sabra19G0082700 Salix brachista HOM05D001705 ORTHO05D008928 7.0e-32 140.6 100 70.0
GSVIVG01036284001 Vitis vinifera HOM05D001705 ORTHO05D008928 7.0e-32 140.6 107 70.1
Hma1.2p1_2213F.1_g317220 Hydrangea macrophylla HOM05D001705 ORTHO05D008928 9.2e-32 140.2 92 70.7
vmacro00942 Vaccinium macrocarpon HOM05D001705 ORTHO05D008928 9.2e-32 140.2 95 73.7
Manes.03G079500 Manihot esculenta HOM05D001705 ORTHO05D008928 1.2e-31 139.8 100 67.0
Rhsim12G0002800 Rhododendron simsii HOM05D001705 ORTHO05D008928 1.6e-31 139.4 86 79.1
Lj3g0021440 Lotus japonicus HOM05D001705 ORTHO05D008928 2.0e-31 139.0 100 69.0
TWI81G0898 Tripterygium wilfordii HOM05D001705 ORTHO05D008928 2.0e-31 139.0 87 77.0
TAR376G0455 Trochodendron aralioides HOM05D001705 ORTHO05D008928 2.7e-31 138.7 106 68.9
CSS0011722 Camellia sinensis var. sinensis HOM05D006697 ORTHO05D008161 3.5e-31 138.3 107 68.2
Duzib106G1039 Durio zibethinus HOM05D001705 ORTHO05D008928 4.6e-31 137.9 84 79.8
Medtr3g008540 Medicago truncatula HOM05D001705 ORTHO05D008928 4.6e-31 137.9 91 76.9
Phvul.L001622 Phaseolus vulgaris HOM05D001705 ORTHO05D008928 4.6e-31 137.9 100 69.0
Thecc.08G179500 Theobroma cacao HOM05D001705 ORTHO05D008928 5.9e-31 137.5 83 78.3
VMungo1080G1609 Vigna mungo HOM05D001705 ORTHO05D008928 7.8e-31 137.1 93 73.1
CSS0025148 Camellia sinensis var. sinensis HOM05D006697 ORTHO05D008161 1.3e-30 136.3 107 67.3
arahy.Tifrunner.gnm1.ann1.X4BGNP Arachis hypogaea HOM05D001705 ORTHO05D008928 1.7e-30 136.0 93 74.2
EL10Ac8g18938 Beta vulgaris HOM05D001705 ORTHO05D008928 1.7e-30 136.0 85 75.3
DCAR_003512 Daucus carota HOM05D001705 ORTHO05D008928 2.3e-30 135.6 82 80.5
Gohir.A06G168000 Gossypium hirsutum HOM05D001705 ORTHO05D008928 3.0e-30 135.2 85 76.5
CANSAT21G1408 Cannabis sativa HOM05D001705 ORTHO05D008928 3.9e-30 134.8 100 66.0
CANSAT21G2117 Cannabis sativa HOM05D001705 ORTHO05D008928 3.9e-30 134.8 100 66.0
AUR62025342 Chenopodium quinoa HOM05D001705 ORTHO05D008928 3.9e-30 134.8 95 67.4
Gohir.D06G175400 Gossypium hirsutum HOM05D001705 ORTHO05D008928 5.0e-30 134.4 84 77.4
Gorai.010G205800 Gossypium raimondii HOM05D001705 ORTHO05D008928 5.0e-30 134.4 84 77.4
MBI06_g14319_MAGBIO Magnolia biondii HOM05D001705 ORTHO05D008928 5.0e-30 134.4 96 69.8
Nitab4.5_0007940g0020 Nicotiana tabacum HOM05D001705 ORTHO05D008928 5.0e-30 134.4 106 65.1
Ah.13g075530 Amaranthus hybridus HOM05D001705 ORTHO05D008928 6.6e-30 134.0 86 70.9
AUR62028345 Chenopodium quinoa HOM05D001705 ORTHO05D008928 6.6e-30 134.0 95 67.4
Nn6g34378 Nelumbo nucifera HOM05D001705 ORTHO05D008928 8.6e-30 133.7 89 75.3
Psat5g227400 Pisum sativum HOM05D001705 ORTHO05D008928 1.1e-29 133.3 92 73.9
Nitab4.5_0003432g0050 Nicotiana tabacum HOM05D001705 ORTHO05D008928 1.5e-29 132.9 106 65.1
Peaxi162Scf00078g00076 Petunia axillaris HOM05D001705 ORTHO05D008928 1.9e-29 132.5 106 64.2
Sopen02g034700 Solanum pennellii HOM05D001705 ORTHO05D008928 2.5e-29 132.1 86 75.6
CAN.G836.15 Capsicum annuum HOM05D001705 ORTHO05D008928 3.3e-29 131.7 86 75.6
Lj3g0024983 Lotus japonicus HOM05D001705 ORTHO05D008928 3.3e-29 131.7 86 75.6
PGR044G0661 Punica granatum HOM05D001705 ORTHO05D008928 4.3e-29 131.3 97 69.1
PGSC0003DMG400010036 Solanum tuberosum HOM05D001705 ORTHO05D008928 4.3e-29 131.3 101 66.3
Aqoxy1G00582 Aquilegia oxysepala HOM05D001705 ORTHO05D008928 5.6e-29 131.0 86 73.3
MSTRG.5080 Avicennia marina HOM05D001705 ORTHO05D008928 5.6e-29 131.0 94 71.3
SalBow7G0612 Salvia bowleyana HOM05D001705 ORTHO05D008928 5.6e-29 131.0 82 79.3
HanXRQChr01g0026311 Helianthus annuus HOM05D001705 ORTHO05D008928 7.3e-29 130.6 100 64.0
Lalb_Chr15g0079721 Lupinus albus HOM05D001705 ORTHO05D008928 9.5e-29 130.2 93 68.8
COL.COLO4_25141 Corchorus olitorius HOM05D001705 ORTHO05D008928 1.2e-28 129.8 81 75.3
Cpa.g.sc21.88 Carica papaya HOM05D001705 ORTHO05D008928 1.6e-28 129.4 85 72.9
Lsat_1_v5_gn_1_56320 Lactuca sativa HOM05D001705 ORTHO05D008928 1.6e-28 129.4 84 72.6
Migut.C01384 Erythranthe guttata HOM05D001705 ORTHO05D008928 3.6e-28 128.3 83 75.9
Sed0017068 Sechium edule HOM05D001705 ORTHO05D008928 1.0e-27 126.7 103 63.1
unitig_8.g4896 Utricularia gibba HOM05D001705 ORTHO05D008928 3.1e-27 125.2 94 64.9
Eucgr.F02944 Eucalyptus grandis HOM05D001705 ORTHO05D008928 5.2e-27 124.4 106 61.3
ClCG08G000770 Citrullus lanatus HOM05D001705 ORTHO05D008928 1.2e-26 123.2 105 61.0
ECA248G1877 Erigeron canadensis HOM05D001705 ORTHO05D008928 1.2e-26 123.2 106 59.4
Aa31LG9G11900 Aethionema arabicum HOM05D001705 ORTHO05D008928 2.6e-26 122.1 106 59.4
CDE11G0405 Ceratophyllum demersum HOM05D001705 ORTHO05D008928 7.5e-26 120.6 101 58.4
THA.LOC104815816 Tarenaya hassleriana HOM05D001705 ORTHO05D008928 7.5e-26 120.6 84 64.3
AT4G10100 Arabidopsis thaliana HOM05D001705 ORTHO05D008928 1.7e-25 119.4 97 61.9
Carub.0006s2867 Capsella rubella HOM05D001705 ORTHO05D008928 3.7e-25 118.2 94 62.8
CsaV3_5G039950 Cucumis sativus L. HOM05D001705 ORTHO05D008928 3.7e-25 118.2 103 58.3
Thhalv10029346m.g Eutrema salsugineum HOM05D001705 ORTHO05D008928 3.7e-25 118.2 84 66.7
MELO3C022174.2 Cucumis melo HOM05D001705 ORTHO05D008928 6.4e-25 117.5 82 69.5
Sc18g0002990 Simmondsia chinensis HOM05D001705 ORTHO05D008928 8.3e-25 117.1 86 65.1
PSO339G0564 Papaver somniferum HOM05D001705 ORTHO05D008928 1.4e-24 116.3 95 68.4
AL6G43910 Arabidopsis lyrata HOM05D001705 ORTHO05D008928 4.1e-24 114.8 84 65.5
BcaB01g01450 Brassica carinata HOM05D001705 ORTHO05D008928 4.1e-24 114.8 91 61.5
BcaB04g18852 Brassica carinata HOM05D001705 ORTHO05D008928 7.0e-24 114.0 81 64.2
BcaB05g23921 Brassica carinata HOM05D001705 ORTHO05D008928 9.2e-24 113.6 84 63.1
BcaC04g21016 Brassica carinata HOM05D001705 ORTHO05D008928 1.2e-23 113.2 84 61.9
A09p28840 Brassica napus HOM05D001705 ORTHO05D008928 1.2e-23 113.2 84 61.9
C09p36640 Brassica napus HOM05D001705 ORTHO05D008928 1.2e-23 113.2 84 61.9
BolC9t56496H Brassica oleracea HOM05D001705 ORTHO05D008928 1.2e-23 113.2 84 61.9
BraA09t38446Z Brassica rapa HOM05D001705 ORTHO05D008928 1.2e-23 113.2 84 61.9
CARHR261140 Cardamine hirsuta HOM05D001705 ORTHO05D008928 1.2e-23 113.2 101 55.4
HPP92_013556 Vanilla planifolia HOM05D001705 ORTHO05D008928 1.6e-23 112.8 89 60.7
VMungo0464G0569 Vigna mungo HOM05D001705 ORTHO05D008928 1.6e-23 112.8 79 69.6
Sp6g07460 Schrenkiella parvula HOM05D001705 ORTHO05D008928 2.7e-23 112.1 106 54.7
Os02g0558300 Oryza sativa ssp. japonica HOM05D001705 ORTHO05D008928 3.5e-23 111.7 77 72.7
SEGI_06051 Sequoiadendron giganteum HOM05D001705 ORTHO05D008928 7.8e-23 110.5 105 54.3
Zm00001eb244080 Zea mays HOM05D001705 ORTHO05D008928 3.0e-22 108.6 80 66.2
Zm00001eb182270 Zea mays HOM05D001705 ORTHO05D008928 6.6e-22 107.5 80 65.0
ATR0757G218 Amborella trichopoda HOM05D001705 ORTHO05D008928 1.5e-21 106.3 102 53.9
Solyc02g090010.3 Solanum lycopersicum HOM05D001705 ORTHO05D008928 1.2e-20 103.2 63 81.0
ATR1089G014 Amborella trichopoda HOM05D001705 ORTHO05D008928 1.4e-19 99.8 93 55.9
SMO178G0001 Selaginella moellendorffii HOM05D001705 ORTHO05D008928 4.4e-18 94.7 86 48.8
SMO119G0349 Selaginella moellendorffii HOM05D001705 ORTHO05D008928 9.8e-18 93.6 86 47.7
SHI16716 Sapria himalayana HOM05D001705 ORTHO05D008928 4.1e-16 88.2 100 43.0
Mapoly0053s0105 Marchantia polymorpha HOM05D001705 ORTHO05D008928 1.2e-15 86.7 106 45.3
Pp3c24_14090 Physcomitrium patens HOM05D001705 ORTHO05D008928 2.7e-15 85.5 81 45.7
BolC2t10291H Brassica oleracea HOM05D001705 ORTHO05D008928 5.2e-11 71.2 70 50.0
Cre08.g382545 Chlamydomonas reinhardtii HOM05D001705 ORTHO05D008928 8.9e-11 70.5 84 39.3
MCO06G125 Micromonas commoda HOM05D001705 ORTHO05D008928 5.8e-10 67.8 84 45.2
CBR_g41370 Chara braunii HOM05D001705 ORTHO05D008928 2.2e-09 65.9 84 36.9
CBR_g5690 Chara braunii HOM05D001705 ORTHO05D008928 2.7e-07 58.9 80 37.5


User provided reference genes

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