Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN27G0155 Fragaria x ananassa HOM05D007388 ORTHO05D009421 1.3e-134 483.0 243 100.0
FAN20G0472 Fragaria x ananassa HOM05D007388 ORTHO05D009421 1.2e-114 416.8 243 88.9
FvH4_2g31130 Fragaria vesca HOM05D007388 ORTHO05D009421 7.5e-114 414.1 241 88.8
FAN24G3326 Fragaria x ananassa HOM05D007388 ORTHO05D009421 1.6e-111 406.4 241 87.6
RcHm_v2.0_Chr6g0311651 Rosa chinensis HOM05D007388 ORTHO05D009421 3.0e-102 375.6 242 81.8
MD15G1051600 Malus domestica HOM05D007388 ORTHO05D009421 2.9e-73 279.3 241 64.7
QL02p016663 Quercus lobata HOM05D007388 ORTHO05D009421 2.1e-63 246.5 239 58.6
Prupe.1G405600 Prunus persica HOM05D007388 ORTHO05D009421 1.8e-62 243.4 193 68.9
TWI63G1062 Tripterygium wilfordii HOM05D007388 ORTHO05D009421 3.0e-62 242.7 239 56.5
Atru.chr7.1857 Acer truncatum HOM05D007388 ORTHO05D009421 9.7e-61 237.7 242 55.8
Gohir.A05G039100 Gossypium hirsutum HOM05D007388 ORTHO05D009421 1.7e-60 236.9 240 53.8
Cfa018015 Carpinus fangiana HOM05D007388 ORTHO05D009421 2.8e-60 236.1 241 55.2
Duzib168G1804 Durio zibethinus HOM05D007388 ORTHO05D009421 2.8e-60 236.1 239 55.6
Gohir.D05G040600 Gossypium hirsutum HOM05D007388 ORTHO05D009421 6.3e-60 235.0 240 53.8
Eucgr.C03150 Eucalyptus grandis HOM05D007388 ORTHO05D009421 1.1e-59 234.2 241 53.5
COL.COLO4_21128 Corchorus olitorius HOM05D007388 ORTHO05D009421 2.6e-58 229.6 239 54.4
CsaV3_4G036020 Cucumis sativus L. HOM05D007388 ORTHO05D009421 3.4e-58 229.2 238 55.5
MELO3C016910.2 Cucumis melo HOM05D007388 ORTHO05D009421 1.0e-57 227.6 238 55.5
Potri.006G221900 Populus trichocarpa HOM05D007388 ORTHO05D009421 1.2e-55 220.7 239 53.1
Lalb_Chr11g0063321 Lupinus albus HOM05D007388 ORTHO05D009421 2.1e-55 219.9 237 52.7
Ciclev10009451m.g Citrus clementina HOM05D007388 ORTHO05D009421 3.6e-55 219.2 239 53.1
Nn8g38703 Nelumbo nucifera HOM05D007388 ORTHO05D009421 3.6e-55 219.2 242 53.3
CiPaw.16G070200 Carya illinoinensis HOM05D007388 ORTHO05D009421 7.9e-55 218.0 240 51.7
Manes.16G084900 Manihot esculenta HOM05D007388 ORTHO05D009421 3.9e-54 215.7 239 51.0
PGR044G0912 Punica granatum HOM05D007388 ORTHO05D009421 3.9e-54 215.7 199 57.3
Medtr3g104980 Medicago truncatula HOM05D007388 ORTHO05D009421 1.1e-53 214.2 237 52.3
Lj1g0010451 Lotus japonicus HOM05D007388 ORTHO05D009421 2.6e-53 213.0 241 53.5
Sed0027665 Sechium edule HOM05D007388 ORTHO05D009421 1.7e-52 210.3 234 51.7
Sabra06G0171500 Salix brachista HOM05D007388 ORTHO05D009421 2.2e-52 209.9 236 50.0
Glyma.06G055600 Glycine max HOM05D007388 ORTHO05D009421 8.2e-52 208.0 241 51.5
Actinidia25694 Actinidia chinensis HOM05D007388 ORTHO05D009421 1.1e-51 207.6 187 57.2
GSVIVG01035454001 Vitis vinifera HOM05D007388 ORTHO05D009421 1.1e-51 207.6 240 52.5
ClCG05G015710 Citrullus lanatus HOM05D007388 ORTHO05D009421 1.8e-51 206.8 251 50.6
Glyma.04G055400 Glycine max HOM05D007388 ORTHO05D009421 1.8e-51 206.8 243 51.4
Psat5g102720 Pisum sativum HOM05D007388 ORTHO05D009421 1.8e-51 206.8 238 51.3
TAR383G1008 Trochodendron aralioides HOM05D007388 ORTHO05D009421 1.8e-51 206.8 240 49.2
Nitab4.5_0001705g0020 Nicotiana tabacum HOM05D007388 ORTHO05D009421 5.3e-51 205.3 201 54.2
CSS0004113 Camellia sinensis var. sinensis HOM05D007388 ORTHO05D009421 7.0e-51 204.9 213 52.6
Gorai.009G041100 Gossypium raimondii HOM05D007388 ORTHO05D009421 9.1e-51 204.5 188 56.9
TPR.G3529 Trifolium pratense HOM05D007388 ORTHO05D009421 2.0e-50 203.4 238 50.0
Dinv41838 Davidia involucrata HOM05D007388 ORTHO05D009421 2.6e-50 203.0 201 53.2
ECA240G1505 Erigeron canadensis HOM05D007388 ORTHO05D009421 2.6e-50 203.0 251 48.2
Thecc.09G062100 Theobroma cacao HOM05D007388 ORTHO05D009421 2.6e-50 203.0 239 52.3
AUR62009088 Chenopodium quinoa HOM05D007388 ORTHO05D009421 4.5e-50 202.2 202 54.5
AUR62020582 Chenopodium quinoa HOM05D007388 ORTHO05D009421 5.9e-50 201.8 262 47.3
Phvul.009G081500 Phaseolus vulgaris HOM05D007388 ORTHO05D009421 2.2e-49 199.9 238 48.7
HanXRQChr04g0097861 Helianthus annuus HOM05D007388 ORTHO05D009421 1.1e-48 197.6 218 51.4
VMungo1309G3057 Vigna mungo HOM05D007388 ORTHO05D009421 7.2e-48 194.9 240 49.2
BcaC04g19512 Brassica carinata HOM05D007388 ORTHO05D009421 2.7e-47 193.0 191 51.8
A10p18840 Brassica napus HOM05D007388 ORTHO05D009421 2.7e-47 193.0 191 51.8
C09p54850 Brassica napus HOM05D007388 ORTHO05D009421 2.7e-47 193.0 191 51.8
BolC9t58346H Brassica oleracea HOM05D007388 ORTHO05D009421 2.7e-47 193.0 191 51.8
MSTRG.25983 Avicennia marina HOM05D007388 ORTHO05D009421 6.1e-47 191.8 238 47.1
Migut.A00083 Erythranthe guttata HOM05D007388 ORTHO05D009421 6.1e-47 191.8 237 44.7
THA.LOC104799581 Tarenaya hassleriana HOM05D007388 ORTHO05D009421 8.0e-47 191.4 177 53.7
BcaB08g36472 Brassica carinata HOM05D007388 ORTHO05D009421 1.0e-46 191.0 202 50.0
BraA10t43964Z Brassica rapa HOM05D007388 ORTHO05D009421 1.0e-46 191.0 191 51.8
Peaxi162Scf00596g00105 Petunia axillaris HOM05D007388 ORTHO05D009421 2.3e-46 189.9 242 45.0
CANSAT25G2576 Cannabis sativa HOM05D007388 ORTHO05D009421 3.0e-46 189.5 173 57.2
ATR0598G070 Amborella trichopoda HOM05D007388 ORTHO05D009421 3.9e-46 189.1 209 48.3
AL6G32850 Arabidopsis lyrata HOM05D007388 ORTHO05D009421 5.2e-46 188.7 199 48.2
CARHR191660 Cardamine hirsuta HOM05D007388 ORTHO05D009421 6.7e-46 188.3 197 50.8
arahy.Tifrunner.gnm1.ann1.P6UV73 Arachis hypogaea HOM05D007388 ORTHO05D009421 1.5e-45 187.2 242 46.7
CAN.G246.5 Capsicum annuum HOM05D007388 ORTHO05D009421 2.6e-45 186.4 237 46.0
Lsat_1_v5_gn_7_58400 Lactuca sativa HOM05D007388 ORTHO05D009421 2.6e-45 186.4 199 52.8
AT5G21430 Arabidopsis thaliana HOM05D007388 ORTHO05D009421 4.4e-45 185.7 199 47.7
Thhalv10014636m.g Eutrema salsugineum HOM05D007388 ORTHO05D009421 9.7e-45 184.5 199 47.7
Carub.0006s1952 Capsella rubella HOM05D007388 ORTHO05D009421 1.3e-44 184.1 201 47.8
Sopen06g034360 Solanum pennellii HOM05D007388 ORTHO05D009421 1.3e-44 184.1 236 46.2
Solyc06g082970.3 Solanum lycopersicum HOM05D007388 ORTHO05D009421 2.8e-44 183.0 236 45.8
Aa31LG1G13520 Aethionema arabicum HOM05D007388 ORTHO05D009421 4.8e-44 182.2 227 44.9
Cc08_g01260 Coffea canephora HOM05D007388 ORTHO05D009421 6.3e-44 181.8 159 60.4
PGSC0003DMG400027673 Solanum tuberosum HOM05D007388 ORTHO05D009421 1.1e-43 181.0 236 46.6
Sp6g23310 Schrenkiella parvula HOM05D007388 ORTHO05D009421 1.8e-43 180.3 191 47.6
Atru.BG.20.p Acer truncatum HOM05D007388 ORTHO05D009421 2.4e-43 179.9 147 59.9
Rhsim10G0152000 Rhododendron simsii HOM05D007388 ORTHO05D009421 3.1e-43 179.5 249 43.4
Oeu000765.1 Olea europaea HOM05D007388 ORTHO05D009421 4.1e-43 179.1 259 40.5
arahy.Tifrunner.gnm1.ann1.044LWD Arachis hypogaea HOM05D000560 ORTHO05D000417 5.3e-43 178.7 241 46.5
DCAR_003716 Daucus carota HOM05D007388 ORTHO05D009421 2.0e-42 176.8 206 45.6
PSO421G0687 Papaver somniferum HOM05D007388 ORTHO05D009421 4.5e-42 175.6 248 47.2
MBI19_g11844_MAGBIO Magnolia biondii HOM05D007388 ORTHO05D009421 5.9e-42 175.3 241 44.4
Ca_15836_v3 Cicer arietinum L. HOM05D007388 ORTHO05D009421 1.3e-41 174.1 189 51.9
CDE06G1148 Ceratophyllum demersum HOM05D007388 ORTHO05D009421 5.0e-41 172.2 199 47.2
FAN15G1408 Fragaria x ananassa HOM05D007388 ORTHO05D009421 4.0e-38 162.5 95 91.6
Os12g0498500 Oryza sativa ssp. japonica HOM05D007388 ORTHO05D009421 1.5e-37 160.6 179 45.8
Zm00001eb409580 Zea mays HOM05D007388 ORTHO05D009421 3.4e-37 159.5 238 40.8
Aqoxy7G01075 Aquilegia oxysepala HOM05D007388 ORTHO05D009421 5.7e-37 158.7 201 47.8
CDE07G0202 Ceratophyllum demersum HOM05D007388 ORTHO05D001048 6.3e-36 155.2 191 44.5
Lj7C227T7 Lonicera japonica HOM05D007388 ORTHO05D009421 6.3e-36 155.2 255 40.0
Nitab4.5_0000268g0090 Nicotiana tabacum HOM05D007388 ORTHO05D009421 1.4e-35 154.1 195 45.1
EL10Ac2g03792 Beta vulgaris HOM05D007388 ORTHO05D009421 1.8e-35 153.7 147 53.1
vmacro12914 Vaccinium macrocarpon HOM05D007388 ORTHO05D009421 1.6e-34 150.6 255 39.6
Lj7C225T7 Lonicera japonica HOM05D007388 ORTHO05D009421 1.5e-32 144.1 255 38.8
Hma1.2p1_0231F.1_g097390 Hydrangea macrophylla HOM05D007388 ORTHO05D009421 9.5e-24 114.8 102 62.7
unitig_4.g30329 Utricularia gibba HOM05D007388 ORTHO05D009421 1.3e-20 104.4 144 43.8
AagrBONN_evm.TU.Sc2ySwM_368.3296 Anthoceros agrestis HOM05D007388 ORTHO05D009421 2.4e-19 100.1 192 35.4
Pp3c4_14700 Physcomitrium patens HOM05D007388 ORTHO05D009421 8.6e-17 91.7 206 32.0
Pp3c12_9640 Physcomitrium patens HOM05D007388 ORTHO05D009421 1.5e-16 90.9 168 35.1
Mapoly0129s0003 Marchantia polymorpha HOM05D007388 ORTHO05D009421 2.0e-10 70.5 196 26.0
Haze_18114 Corylus avellana HOM05D007388 ORTHO05D009421 3.5e-10 69.7 90 53.3
SMO223G0044 Selaginella moellendorffii HOM05D007480 ORTHO05D009460 2.1e-07 60.5 96 35.4
QL07p047550 Quercus lobata HOM05D007388 ORTHO05D009421 2.3e-06 57.0 90 46.7
QL11p041786 Quercus lobata HOM05D007388 ORTHO05D009421 2.3e-06 57.0 90 46.7
Mapoly0007s0106 Marchantia polymorpha HOM05D007480 ORTHO05D009460 3.1e-06 56.6 101 34.7
QL11p041555 Quercus lobata HOM05D007388 ORTHO05D009421 8.9e-06 55.1 90 45.6


User provided reference genes

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