Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN27G0079 Fragaria x ananassa HOM05D004094 ORTHO05D004601 2.5e-40 168.3 85 100.0
FAN15G1439 Fragaria x ananassa HOM05D004094 ORTHO05D004601 2.1e-31 138.7 74 91.9
FAN20G0769 Fragaria x ananassa HOM05D004094 ORTHO05D004601 1.8e-30 135.6 68 97.1
FAN15G0810 Fragaria x ananassa HOM05D004094 ORTHO05D004601 1.8e-22 109.0 63 84.1
FAN20G0223 Fragaria x ananassa HOM05D004094 ORTHO05D004601 1.8e-22 109.0 63 84.1
FvH4_2g26770 Fragaria vesca HOM05D004094 ORTHO05D004601 9.0e-22 106.7 63 82.5
FAN20G1705 Fragaria x ananassa HOM05D004094 ORTHO05D004601 9.0e-22 106.7 71 71.8
FAN24G0267 Fragaria x ananassa HOM05D004094 ORTHO05D004601 9.0e-22 106.7 63 82.5
FAN27G0677 Fragaria x ananassa HOM05D004094 ORTHO05D004601 1.2e-21 106.3 63 82.5
RcHm_v2.0_Chr6g0295641 Rosa chinensis HOM05D004094 ORTHO05D004601 1.4e-19 99.4 64 78.1
Cfa016008 Carpinus fangiana HOM05D004094 ORTHO05D004601 2.2e-12 75.5 63 57.1
Haze_00454 Corylus avellana HOM05D004094 ORTHO05D004601 2.2e-12 75.5 63 57.1
MD15G1351000 Malus domestica HOM05D004094 ORTHO05D004601 2.9e-12 75.1 61 67.2
CiPaw.05G222800 Carya illinoinensis HOM05D004094 ORTHO05D004601 1.9e-11 72.4 61 57.4
QL09p035258 Quercus lobata HOM05D004094 ORTHO05D004601 2.5e-11 72.0 66 53.0
Prupe.1G499900 Prunus persica HOM05D004094 ORTHO05D004601 5.5e-11 70.9 62 59.7
CSS0004297 Camellia sinensis var. sinensis HOM05D004094 ORTHO05D004601 2.7e-10 68.6 64 59.4
Thecc.08G123800 Theobroma cacao HOM05D004094 ORTHO05D004601 3.0e-09 65.1 66 47.0
Lj1g0018898 Lotus japonicus HOM05D004094 ORTHO05D004601 2.5e-08 62.0 69 52.2
Dinv07237 Davidia involucrata HOM05D004094 ORTHO05D004601 7.4e-08 60.5 63 54.0
vmacro12538 Vaccinium macrocarpon HOM05D004094 ORTHO05D004601 2.8e-07 58.5 62 46.8
CsaV3_4G028330 Cucumis sativus L. HOM05D004094 ORTHO05D004601 3.7e-07 58.2 69 49.3
Dinv27324 Davidia involucrata HOM05D004094 ORTHO05D004601 3.7e-07 58.2 63 47.6
Manes.02G162400 Manihot esculenta HOM05D004094 ORTHO05D004601 3.7e-07 58.2 64 46.9
TPR.G25784 Trifolium pratense HOM05D004094 ORTHO05D004601 3.7e-07 58.2 68 51.5
Ca_12613_v3 Cicer arietinum L. HOM05D004094 ORTHO05D004601 4.8e-07 57.8 69 50.7
COL.COLO4_35940 Corchorus olitorius HOM05D004094 ORTHO05D004601 4.8e-07 57.8 66 42.4
Duzib041G0387 Durio zibethinus HOM05D004094 ORTHO05D004601 6.3e-07 57.4 56 50.0
Aqoxy6G00193 Aquilegia oxysepala HOM05D004094 ORTHO05D004601 1.1e-06 56.6 78 43.6
Psat6g041960 Pisum sativum HOM05D004094 ORTHO05D004601 1.8e-06 55.8 69 50.7
Oeu047946.1 Olea europaea HOM05D004094 ORTHO05D004601 2.4e-06 55.5 62 43.5
Rhsim06G0104600 Rhododendron simsii HOM05D004094 ORTHO05D004601 2.4e-06 55.5 60 46.7
Gorai.010G049800 Gossypium raimondii HOM05D004094 ORTHO05D004601 3.1e-06 55.1 77 40.3
PGR042G1714 Punica granatum HOM05D004094 ORTHO05D004601 3.1e-06 55.1 61 47.5
Gohir.A06G043800 Gossypium hirsutum HOM05D004094 ORTHO05D004601 4.1e-06 54.7 77 40.3
Gohir.D06G044700 Gossypium hirsutum HOM05D004094 ORTHO05D004601 4.1e-06 54.7 77 40.3
Medtr1g030410 Medicago truncatula HOM05D004094 ORTHO05D004601 5.3e-06 54.3 60 50.0
Phvul.008G163600 Phaseolus vulgaris HOM05D004094 ORTHO05D004601 6.9e-06 53.9 56 51.8
SalBow7G0426 Salvia bowleyana HOM05D004094 ORTHO05D004601 6.9e-06 53.9 63 42.9
Ca_15191_v3 Cicer arietinum L. HOM05D004094 ORTHO05D004601 9.1e-06 53.5 57 50.9


User provided reference genes

Program Settings