Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN27G0042 Fragaria x ananassa HOM05D006548 ORTHO05D008064 1.3e-82 309.7 159 100.0
FAN27G0390 Fragaria x ananassa HOM05D006548 ORTHO05D008064 1.3e-82 309.7 159 100.0
FvH4_2g17650 Fragaria vesca HOM05D006548 ORTHO05D008064 5.5e-81 304.3 159 98.7
FAN24G3284 Fragaria x ananassa HOM05D006548 ORTHO05D008064 1.1e-78 296.6 159 97.5
RcHm_v2.0_Chr6g0282621 Rosa chinensis HOM05D006548 ORTHO05D008064 5.5e-73 277.7 159 88.7
Atru.chr6.3534 Acer truncatum HOM05D006548 ORTHO05D008064 2.0e-62 242.7 166 76.5
Prupe.8G188900 Prunus persica HOM05D006548 ORTHO05D008064 1.7e-61 239.6 166 76.5
MD10G1150500 Malus domestica HOM05D006548 ORTHO05D008064 2.2e-61 239.2 164 77.4
TAR362G1118 Trochodendron aralioides HOM05D006548 ORTHO05D008064 1.4e-60 236.5 165 72.7
Lj2P1115T39 Lonicera japonica HOM05D006548 ORTHO05D008064 2.4e-60 235.7 160 74.4
Cpa.g.sc8.57 Carica papaya HOM05D004405 ORTHO05D005613 3.1e-60 235.3 162 74.1
PGR083G0463 Punica granatum HOM05D006548 ORTHO05D008064 3.1e-60 235.3 154 74.7
Sabra02G0182000 Salix brachista HOM05D006548 ORTHO05D008064 9.1e-60 233.8 165 74.5
COL.COLO4_06931 Corchorus olitorius HOM05D006548 ORTHO05D008064 1.6e-59 233.0 157 70.7
Gorai.007G160300 Gossypium raimondii HOM05D006548 ORTHO05D008064 2.7e-59 232.3 157 73.2
Manes.13G055300 Manihot esculenta HOM05D006548 ORTHO05D008064 2.7e-59 232.3 157 74.5
Potri.002G239000 Populus trichocarpa HOM05D006548 ORTHO05D008064 2.7e-59 232.3 157 75.2
Sed0004612 Sechium edule HOM05D006548 ORTHO05D008064 2.7e-59 232.3 161 73.3
Gohir.A11G143200 Gossypium hirsutum HOM05D006548 ORTHO05D008064 3.5e-59 231.9 157 73.2
Gohir.D11G149500 Gossypium hirsutum HOM05D006548 ORTHO05D008064 4.5e-59 231.5 158 72.8
PSO017G5831 Papaver somniferum HOM05D006548 ORTHO05D008064 1.7e-58 229.6 162 74.7
Manes.12G059600 Manihot esculenta HOM05D006548 ORTHO05D008064 2.9e-58 228.8 157 73.9
Nn3g18599 Nelumbo nucifera HOM05D006548 ORTHO05D008064 2.9e-58 228.8 165 72.7
PSO675G8742 Papaver somniferum HOM05D006548 ORTHO05D008064 5.0e-58 228.0 162 75.9
Rhsim13G0053600 Rhododendron simsii HOM05D006548 ORTHO05D008064 6.6e-58 227.6 161 70.2
vmacro02826 Vaccinium macrocarpon HOM05D006548 ORTHO05D008064 1.1e-57 226.9 157 71.3
CSS0021481 Camellia sinensis var. sinensis HOM05D006548 ORTHO05D008064 3.3e-57 225.3 165 73.3
Gohir.D07G202600 Gossypium hirsutum HOM05D006548 ORTHO05D008064 3.3e-57 225.3 154 72.1
Gorai.001G228000 Gossypium raimondii HOM05D006548 ORTHO05D008064 3.3e-57 225.3 162 69.8
CiPaw.13G058400 Carya illinoinensis HOM05D006548 ORTHO05D008064 5.5e-57 224.6 159 71.7
Sp3g06390 Schrenkiella parvula HOM05D006548 ORTHO05D008064 1.6e-56 223.0 161 69.6
Potri.014G177100 Populus trichocarpa HOM05D006548 ORTHO05D008064 2.1e-56 222.6 160 71.9
AL3G18800 Arabidopsis lyrata HOM05D006548 ORTHO05D008064 2.8e-56 222.2 157 70.1
AT3G07480 Arabidopsis thaliana HOM05D006548 ORTHO05D008064 2.8e-56 222.2 157 70.1
ClCG09G007890 Citrullus lanatus HOM05D006548 ORTHO05D008064 4.7e-56 221.5 156 72.4
Ciclev10017030m.g Citrus clementina HOM05D006548 ORTHO05D008064 4.7e-56 221.5 160 71.2
Sabra14G0135300 Salix brachista HOM05D006548 ORTHO05D008064 4.7e-56 221.5 159 71.1
Hma1.2p1_0161F.1_g071510 Hydrangea macrophylla HOM05D006548 ORTHO05D008064 1.0e-55 220.3 157 71.3
THA.LOC104819003 Tarenaya hassleriana HOM05D006548 ORTHO05D008064 1.0e-55 220.3 160 70.0
CANSAT01G2941 Cannabis sativa HOM05D006548 ORTHO05D008064 1.4e-55 219.9 159 70.4
Nn4g25121 Nelumbo nucifera HOM05D006548 ORTHO05D008064 1.4e-55 219.9 165 70.3
arahy.Tifrunner.gnm1.ann1.C7NXRU Arachis hypogaea HOM05D006548 ORTHO05D008064 1.8e-55 219.5 160 69.4
CARHR082130 Cardamine hirsuta HOM05D006548 ORTHO05D008064 2.3e-55 219.2 160 67.5
Nitab4.5_0001348g0010 Nicotiana tabacum HOM05D006548 ORTHO05D008064 2.3e-55 219.2 165 69.1
Nitab4.5_0007144g0040 Nicotiana tabacum HOM05D006548 ORTHO05D008064 2.3e-55 219.2 165 69.1
Phvul.008G137800 Phaseolus vulgaris HOM05D006548 ORTHO05D008064 2.3e-55 219.2 154 70.1
VMungo1383G2587 Vigna mungo HOM05D006548 ORTHO05D008064 2.3e-55 219.2 154 72.7
arahy.Tifrunner.gnm1.ann1.I0E60T Arachis hypogaea HOM05D006548 ORTHO05D008064 3.0e-55 218.8 160 69.4
MELO3C015717.2 Cucumis melo HOM05D006548 ORTHO05D008064 3.0e-55 218.8 165 68.5
BolC5t34638H Brassica oleracea HOM05D006548 ORTHO05D008064 4.0e-55 218.4 157 69.4
Aqoxy2G04054 Aquilegia oxysepala HOM05D006548 ORTHO05D008064 5.2e-55 218.0 160 68.1
Carub.0003s0703 Capsella rubella HOM05D006548 ORTHO05D008064 5.2e-55 218.0 157 69.4
Thhalv10021677m.g Eutrema salsugineum HOM05D006548 ORTHO05D008064 5.2e-55 218.0 154 68.8
BcaC05g29539 Brassica carinata HOM05D006548 ORTHO05D008064 6.8e-55 217.6 158 68.4
MBI08_g14954_MAGBIO Magnolia biondii HOM05D006659 ORTHO05D008064 6.8e-55 217.6 161 70.2
C05p59840 Brassica napus HOM05D006548 ORTHO05D008064 1.2e-54 216.9 157 69.4
Duzib138G0849 Durio zibethinus HOM05D006548 ORTHO05D008064 2.0e-54 216.1 157 68.8
A05p40730 Brassica napus HOM05D006548 ORTHO05D008064 2.6e-54 215.7 157 68.2
BraA05t22804Z Brassica rapa HOM05D006548 ORTHO05D008064 2.6e-54 215.7 157 68.2
Aa31LG5G18040 Aethionema arabicum HOM05D006548 ORTHO05D008064 3.4e-54 215.3 159 67.9
Cfa010631 Carpinus fangiana HOM05D006548 ORTHO05D008064 3.4e-54 215.3 163 70.6
CAN.G874.34 Capsicum annuum HOM05D006548 ORTHO05D008064 1.3e-53 213.4 162 67.9
Nitab4.5_0011925g0010 Nicotiana tabacum HOM05D006548 ORTHO05D008064 2.2e-53 212.6 165 68.5
CSS0032607 Camellia sinensis var. sinensis HOM05D006548 ORTHO05D008064 2.9e-53 212.2 166 67.5
Cc01_g16030 Coffea canephora HOM05D006548 ORTHO05D008064 3.7e-53 211.8 161 66.5
Peaxi162Scf00372g00041 Petunia axillaris HOM05D006548 ORTHO05D008064 3.7e-53 211.8 154 70.1
Haze_03573 Corylus avellana HOM05D006548 ORTHO05D008064 1.1e-52 210.3 165 67.9
Duzib211G0675 Durio zibethinus HOM05D006548 ORTHO05D008064 1.4e-52 209.9 157 65.0
BcaB03g14699 Brassica carinata HOM05D006548 ORTHO05D008064 1.8e-52 209.5 159 66.0
DCAR_030798 Daucus carota HOM05D006548 ORTHO05D008064 1.8e-52 209.5 156 66.7
HanXRQChr08g0231851 Helianthus annuus HOM05D006548 ORTHO05D008064 1.8e-52 209.5 154 68.8
Nitab4.5_0002311g0090 Nicotiana tabacum HOM05D006548 ORTHO05D008064 1.8e-52 209.5 162 67.9
Glyma.08G343100 Glycine max HOM05D006548 ORTHO05D008064 5.4e-52 208.0 154 66.9
Oeu051515.1 Olea europaea HOM05D006548 ORTHO05D008064 5.4e-52 208.0 165 65.5
ECA247G0922 Erigeron canadensis HOM05D006548 ORTHO05D008064 1.6e-51 206.5 156 67.9
Migut.N00670 Erythranthe guttata HOM05D006548 ORTHO05D008064 1.6e-51 206.5 160 63.8
Lj1g0008534 Lotus japonicus HOM05D006548 ORTHO05D008064 2.7e-51 205.7 146 66.4
ATR0824G029 Amborella trichopoda HOM05D006548 ORTHO05D008064 3.5e-51 205.3 161 67.1
QL09p047049 Quercus lobata HOM05D006548 ORTHO05D008064 4.6e-51 204.9 162 65.4
PGSC0003DMG400027686 Solanum tuberosum HOM05D006548 ORTHO05D008064 4.6e-51 204.9 157 67.5
HPP92_002744 Vanilla planifolia HOM05D006548 ORTHO05D008064 5.9e-51 204.5 164 65.2
AUR62028648 Chenopodium quinoa HOM05D006548 ORTHO05D008064 7.8e-51 204.1 165 63.0
Sopen06g034400 Solanum pennellii HOM05D006548 ORTHO05D008064 7.8e-51 204.1 162 66.7
Ah.11g050830 Amaranthus hybridus HOM05D006548 ORTHO05D008064 1.3e-50 203.4 141 70.9
TWI75G1339 Tripterygium wilfordii HOM05D006548 ORTHO05D008064 6.6e-50 201.1 154 66.2
SGA_v2.0_scaffold95G28706 Striga asiatica HOM05D006548 ORTHO05D008064 1.5e-49 199.9 157 62.4
Glyma.18G153900 Glycine max HOM05D006548 ORTHO05D008064 1.9e-49 199.5 154 65.6
MSTRG.17967 Avicennia marina HOM05D006548 ORTHO05D008064 2.5e-49 199.1 157 63.1
unitig_61.g26345 Utricularia gibba HOM05D006548 ORTHO05D008064 2.5e-49 199.1 152 63.8
Lalb_Chr01g0021941 Lupinus albus HOM05D006548 ORTHO05D008064 3.3e-49 198.7 154 65.6
Thecc.01G209700 Theobroma cacao HOM05D006548 ORTHO05D008064 7.3e-49 197.6 141 70.2
Lalb_Chr03g0040981 Lupinus albus HOM05D006548 ORTHO05D008064 9.5e-49 197.2 159 62.9
TWI36G0698 Tripterygium wilfordii HOM05D006548 ORTHO05D008064 2.1e-48 196.1 154 64.9
Psat3g151760 Pisum sativum HOM05D006548 ORTHO05D008064 2.8e-48 195.7 159 64.2
Zm00001eb102720 Zea mays HOM05D006548 ORTHO05D008064 3.6e-48 195.3 153 63.4
TWI18G0731 Tripterygium wilfordii HOM05D006548 ORTHO05D008064 1.4e-47 193.4 151 64.2
PGSC0003DMG400020639 Solanum tuberosum HOM05D006548 ORTHO05D008064 1.8e-47 193.0 162 61.7
Solyc06g007630.1 Solanum lycopersicum HOM05D006548 ORTHO05D008064 3.1e-47 192.2 162 61.7
Sopen06g002520 Solanum pennellii HOM05D006548 ORTHO05D008064 3.1e-47 192.2 162 61.7
Ca_07442_v3 Cicer arietinum L. HOM05D006548 ORTHO05D008064 4.0e-47 191.8 157 61.8
Os09g0514600 Oryza sativa ssp. japonica HOM05D006548 ORTHO05D008064 4.0e-47 191.8 153 61.4
GSVIVG01003797001 Vitis vinifera HOM05D006548 ORTHO05D008064 4.0e-47 191.8 118 69.5
TPR.G26806 Trifolium pratense HOM05D006548 ORTHO05D008064 6.8e-47 191.0 157 63.1
Lsat_1_v5_gn_9_16480 Lactuca sativa HOM05D006548 ORTHO05D008064 4.9e-45 184.9 162 64.2
Medtr7g051230 Medicago truncatula HOM05D006548 ORTHO05D008064 4.9e-45 184.9 156 59.0
Zm00001eb318350 Zea mays HOM05D006548 ORTHO05D008064 2.4e-44 182.6 157 58.0
CsaV3_7G027180 Cucumis sativus L. HOM05D006548 ORTHO05D008064 4.1e-44 181.8 149 64.4
Sc05g0001680 Simmondsia chinensis HOM05D006548 ORTHO05D008064 6.2e-40 167.9 138 61.6
EL10Ac5g10597 Beta vulgaris HOM05D006548 ORTHO05D008064 1.4e-39 166.8 109 72.5
Gohir.A07G196200 Gossypium hirsutum HOM05D006548 ORTHO05D008064 1.4e-36 156.8 91 76.9
Pp3c2_31000 Physcomitrium patens HOM05D006548 ORTHO05D008064 1.2e-32 143.7 155 51.6
AagrBONN_evm.TU.Sc2ySwM_362.984 Anthoceros agrestis HOM05D006548 ORTHO05D008064 4.4e-30 135.2 158 46.8
Ciclev10013747m.g Citrus clementina HOM05D006548 ORTHO05D008064 6.4e-29 131.3 82 74.4
CDE12G0850 Ceratophyllum demersum HOM05D006548 ORTHO05D008064 3.2e-28 129.0 77 71.4
BcaC05g29538 Brassica carinata HOM05D006548 ORTHO05D008064 2.1e-27 126.3 105 64.8
Mapoly0085s0036 Marchantia polymorpha HOM05D006548 ORTHO05D008064 2.5e-25 119.4 138 46.4
C03p67920 Brassica napus HOM05D006548 ORTHO05D008064 3.3e-25 119.0 90 63.3
BcaC01g02172 Brassica carinata HOM05D006548 ORTHO05D008064 5.6e-25 118.2 90 63.3
SEGI_16405 Sequoiadendron giganteum HOM05D002489 ORTHO05D002653 3.9e-18 95.5 82 61.0
CBR_g34314 Chara braunii HOM05D006548 ORTHO05D008064 5.3e-15 85.1 166 34.3
Actinidia30005 Actinidia chinensis HOM05D006548 ORTHO05D008064 6.9e-15 84.7 170 44.7
BolC3t19017H Brassica oleracea HOM05D006548 ORTHO05D008064 1.5e-14 83.6 49 73.5
BraA03t13759Z Brassica rapa HOM05D006548 ORTHO05D008064 3.4e-14 82.4 49 75.5
SMO119G0279 Selaginella moellendorffii HOM05D006548 ORTHO05D008064 3.4e-14 82.4 118 37.3
Mapoly0113s0043 Marchantia polymorpha HOM05D006548 ORTHO05D008064 1.6e-08 63.5 139 30.9


User provided reference genes

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