Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN27G0024 Fragaria x ananassa HOM05D005311 ORTHO05D006160 3.4e-118 428.3 216 100.0
FAN24G0492 Fragaria x ananassa HOM05D005311 ORTHO05D006160 2.1e-115 419.1 216 98.6
FAN20G1889 Fragaria x ananassa HOM05D005311 ORTHO05D006160 5.7e-113 411.0 216 96.3
FAN15G1540 Fragaria x ananassa HOM05D005311 ORTHO05D006160 1.5e-110 402.9 208 97.6
FvH4_2g03130 Fragaria vesca HOM05D005311 ORTHO05D006160 2.0e-110 402.5 216 96.3
RcHm_v2.0_Chr6g0248001 Rosa chinensis HOM05D005311 ORTHO05D006160 2.1e-99 365.9 249 79.5
MD05G1106900 Malus domestica HOM05D005311 ORTHO05D006160 8.3e-80 300.8 228 71.1
MD10G1111900 Malus domestica HOM05D005311 ORTHO05D006160 1.3e-77 293.5 228 71.9
Atru.chr5.2262 Acer truncatum HOM05D005311 ORTHO05D006160 1.0e-66 257.3 223 64.1
GSVIVG01037044001 Vitis vinifera HOM05D005311 ORTHO05D006160 1.8e-66 256.5 222 63.1
CANSAT25G3378 Cannabis sativa HOM05D005311 ORTHO05D006160 3.4e-65 252.3 227 61.2
CiPaw.05G021200 Carya illinoinensis HOM05D005311 ORTHO05D006160 5.8e-65 251.5 227 60.4
Prupe.8G151000 Prunus persica HOM05D005311 ORTHO05D006160 8.3e-64 247.7 184 72.8
COL.COLO4_32478 Corchorus olitorius HOM05D005311 ORTHO05D006160 1.2e-62 243.8 222 61.3
Gohir.D12G019000 Gossypium hirsutum HOM05D005311 ORTHO05D006160 2.7e-62 242.7 221 59.7
Gohir.A12G018400 Gossypium hirsutum HOM05D005311 ORTHO05D006160 4.6e-62 241.9 221 60.2
QL11p029204 Quercus lobata HOM05D005311 ORTHO05D006160 6.0e-62 241.5 241 57.7
Manes.07G056400 Manihot esculenta HOM05D005311 ORTHO05D006160 1.0e-61 240.7 224 59.4
Gorai.008G019300 Gossypium raimondii HOM05D005311 ORTHO05D006160 1.3e-61 240.4 221 59.3
TWI59G0049 Tripterygium wilfordii HOM05D005311 ORTHO05D006160 5.0e-61 238.4 224 58.9
Potri.009G084800 Populus trichocarpa HOM05D005311 ORTHO05D006160 8.6e-61 237.7 226 60.2
TWI14G0308 Tripterygium wilfordii HOM05D005311 ORTHO05D006160 8.6e-61 237.7 224 59.4
Ciclev10029272m.g Citrus clementina HOM05D005311 ORTHO05D006160 1.9e-60 236.5 224 59.8
Duzib052G0370 Durio zibethinus HOM05D005311 ORTHO05D006160 5.6e-60 235.0 221 57.9
Sed0009957 Sechium edule HOM05D005311 ORTHO05D006160 5.6e-60 235.0 228 57.9
Thecc.02G120600 Theobroma cacao HOM05D005311 ORTHO05D006160 7.3e-60 234.6 221 57.5
arahy.Tifrunner.gnm1.ann1.KVB0K0 Arachis hypogaea HOM05D005311 ORTHO05D006160 2.1e-59 233.0 235 56.2
Gohir.D02G203104 Gossypium hirsutum HOM05D005311 ORTHO05D006160 4.7e-59 231.9 221 56.1
Gohir.A03G180600 Gossypium hirsutum HOM05D005311 ORTHO05D006160 8.1e-59 231.1 221 56.1
Rhsim11G0150000 Rhododendron simsii HOM05D005311 ORTHO05D006160 8.1e-59 231.1 226 59.7
Eucgr.I02500 Eucalyptus grandis HOM05D005311 ORTHO05D006160 1.8e-58 229.9 227 58.1
Gorai.005G229500 Gossypium raimondii HOM05D005311 ORTHO05D006160 1.8e-58 229.9 221 55.7
Potri.001G289400 Populus trichocarpa HOM05D005311 ORTHO05D006160 4.0e-58 228.8 221 58.8
MELO3C018026.2 Cucumis melo HOM05D005311 ORTHO05D006160 1.5e-57 226.9 224 56.7
TAR376G1236 Trochodendron aralioides HOM05D000442 ORTHO05D006160 3.7e-56 222.2 222 55.4
Actinidia00352 Actinidia chinensis HOM05D005311 ORTHO05D006160 1.9e-55 219.9 228 54.8
Phvul.007G047500 Phaseolus vulgaris HOM05D005311 ORTHO05D006160 1.9e-55 219.9 226 54.0
ECA240G0703 Erigeron canadensis HOM05D005311 ORTHO05D006160 2.4e-55 219.5 221 57.9
Glyma.10G255200 Glycine max HOM05D005311 ORTHO05D006160 2.4e-55 219.5 230 55.2
TAR628G1269 Trochodendron aralioides HOM05D005311 ORTHO05D006160 2.4e-55 219.5 231 55.0
Lsat_1_v5_gn_9_113920 Lactuca sativa HOM05D005311 ORTHO05D006160 4.1e-55 218.8 221 57.0
Medtr1g105970 Medicago truncatula HOM05D005311 ORTHO05D006160 1.2e-54 217.2 223 54.3
Lalb_Chr21g0307981 Lupinus albus HOM05D005311 ORTHO05D006160 2.7e-54 216.1 226 54.9
Lalb_Chr16g0376301 Lupinus albus HOM05D005311 ORTHO05D006160 3.5e-54 215.7 214 57.0
Actinidia02445 Actinidia chinensis HOM05D005311 ORTHO05D006160 6.0e-54 214.9 228 53.1
Cpa.g.sc106.28 Carica papaya HOM05D005311 ORTHO05D006160 6.0e-54 214.9 279 47.3
CSS0009611 Camellia sinensis var. sinensis HOM05D005311 ORTHO05D006160 7.8e-54 214.5 224 56.2
TAR625G0307 Trochodendron aralioides HOM05D005311 ORTHO05D006160 7.8e-54 214.5 231 56.3
Cc02_g20120 Coffea canephora HOM05D005311 ORTHO05D006160 1.7e-53 213.4 226 54.9
Lj5g0014269 Lotus japonicus HOM05D005311 ORTHO05D006160 1.7e-53 213.4 227 54.2
Sopen01g049100 Solanum pennellii HOM05D005311 ORTHO05D006160 5.1e-53 211.8 226 53.1
Solyc01g106790.3 Solanum lycopersicum HOM05D005311 ORTHO05D006160 1.1e-52 210.7 226 54.0
HanXRQChr15g0495651 Helianthus annuus HOM05D005311 ORTHO05D006160 2.5e-52 209.5 216 55.1
Peaxi162Scf00016g03127 Petunia axillaris HOM05D005311 ORTHO05D006160 3.3e-52 209.1 214 55.6
PGSC0003DMG400025735 Solanum tuberosum HOM05D005311 ORTHO05D006160 3.3e-52 209.1 226 52.7
CAN.G606.76 Capsicum annuum HOM05D005311 ORTHO05D006160 4.3e-52 208.8 230 53.0
Lsat_1_v5_gn_7_84560 Lactuca sativa HOM05D005311 ORTHO05D006160 4.3e-52 208.8 224 54.5
Ca_11020_v3 Cicer arietinum L. HOM05D005311 ORTHO05D006160 5.6e-52 208.4 176 62.5
Aqoxy5G01939 Aquilegia oxysepala HOM05D005311 ORTHO05D006160 7.3e-52 208.0 175 64.0
Lalb_Chr02g0144871 Lupinus albus HOM05D005311 ORTHO05D006160 1.2e-51 207.2 226 52.2
SalBow6G1857 Salvia bowleyana HOM05D005311 ORTHO05D006160 1.6e-51 206.8 220 55.9
Glyma.20G136100 Glycine max HOM05D005311 ORTHO05D006160 2.8e-51 206.1 230 53.9
Nitab4.5_0000772g0050 Nicotiana tabacum HOM05D005311 ORTHO05D006160 4.7e-51 205.3 221 54.8
Sc18g0007330 Simmondsia chinensis HOM05D005311 ORTHO05D006160 4.7e-51 205.3 222 54.5
Nn6g32054 Nelumbo nucifera HOM05D005311 ORTHO05D006160 8.1e-51 204.5 153 71.9
Nitab4.5_0009103g0020 Nicotiana tabacum HOM05D005311 ORTHO05D006160 1.8e-50 203.4 222 55.0
SGA_v2.0_scaffold32G12981 Striga asiatica HOM05D005311 ORTHO05D006160 2.3e-50 203.0 224 51.8
arahy.Tifrunner.gnm1.ann1.QK2693 Arachis hypogaea HOM05D005311 ORTHO05D006160 3.1e-50 202.6 153 67.3
AUR62030871 Chenopodium quinoa HOM05D005311 ORTHO05D006160 3.1e-50 202.6 214 55.6
Actinidia28002 Actinidia chinensis HOM05D004628 ORTHO05D006160 6.8e-50 201.4 192 59.9
Sabra16G0181000 Salix brachista HOM05D002370 ORTHO05D003878 8.9e-50 201.1 183 57.4
MSTRG.16668 Avicennia marina HOM05D005311 ORTHO05D006160 1.2e-49 200.7 178 59.6
AUR62027028 Chenopodium quinoa HOM05D005311 ORTHO05D006160 1.2e-49 200.7 210 56.2
THA.LOC104815219 Tarenaya hassleriana HOM05D005311 ORTHO05D006160 1.2e-49 200.7 219 56.2
VMungo0720G0066 Vigna mungo HOM05D005311 ORTHO05D006160 1.5e-49 200.3 158 65.2
Migut.B00474 Erythranthe guttata HOM05D005311 ORTHO05D006160 5.8e-49 198.4 175 61.7
ClCG10G010010 Citrullus lanatus HOM05D005311 ORTHO05D006160 7.6e-49 198.0 152 67.8
CsaV3_4G000050 Cucumis sativus L. HOM05D005311 ORTHO05D006160 1.9e-47 193.4 151 65.6
Ah.01g024570 Amaranthus hybridus HOM05D005311 ORTHO05D006160 3.2e-47 192.6 162 65.4
Lj9A337G44 Lonicera japonica HOM05D005311 ORTHO05D006160 4.1e-47 192.2 152 68.4
DCAR_021939 Daucus carota HOM05D005311 ORTHO05D006160 7.1e-47 191.4 153 68.0
PSO210G6612 Papaver somniferum HOM05D005311 ORTHO05D006160 7.1e-47 191.4 225 51.6
Thhalv10011774m.g Eutrema salsugineum HOM05D005311 ORTHO05D006160 1.6e-46 190.3 219 52.1
vmacro01940 Vaccinium macrocarpon HOM05D000211 ORTHO05D002517 2.1e-46 189.9 181 60.2
Hund00418 Selenicereus undatus HOM05D005311 ORTHO05D006160 2.7e-46 189.5 223 52.9
ATR0767G087 Amborella trichopoda HOM05D005311 ORTHO05D006160 6.0e-46 188.3 169 59.2
Carub.0001s3920 Capsella rubella HOM05D005311 ORTHO05D006160 6.0e-46 188.3 217 51.2
HanXRQChr03g0073011 Helianthus annuus HOM05D005311 ORTHO05D006160 7.8e-46 188.0 221 52.5
ECA236G2995 Erigeron canadensis HOM05D000211 ORTHO05D002517 1.3e-45 187.2 173 59.5
Sp1g36880 Schrenkiella parvula HOM05D005311 ORTHO05D006160 2.3e-45 186.4 220 51.8
PSO447G0012 Papaver somniferum HOM05D005311 ORTHO05D006160 5.1e-45 185.3 225 51.6
AL1G57590 Arabidopsis lyrata HOM05D005311 ORTHO05D006160 6.6e-45 184.9 171 59.6
AT1G50020 Arabidopsis thaliana HOM05D005311 ORTHO05D006160 1.5e-44 183.7 216 52.8
A08p03390 Brassica napus HOM05D005311 ORTHO05D006160 5.6e-44 181.8 222 52.7
BolC3t21257H Brassica oleracea HOM05D005311 ORTHO05D006160 3.6e-43 179.1 163 61.3
CARHR040130 Cardamine hirsuta HOM05D005311 ORTHO05D006160 3.6e-43 179.1 174 56.9
BraA08t32371Z Brassica rapa HOM05D005311 ORTHO05D006160 8.1e-43 177.9 222 51.4
C03p89430 Brassica napus HOM05D005311 ORTHO05D006160 3.1e-42 176.0 163 60.7
Lj5A221T62 Lonicera japonica HOM05D005311 ORTHO05D006160 2.0e-41 173.3 147 61.9
Duzib132G0391 Durio zibethinus HOM05D005311 ORTHO05D006160 2.6e-41 172.9 221 48.4
Aa31LG10G4090 Aethionema arabicum HOM05D002370 ORTHO05D003878 2.2e-40 169.9 155 58.7
Oeu037294.1 Olea europaea HOM05D005311 ORTHO05D006160 4.9e-40 168.7 146 61.6
BcaB07g33454 Brassica carinata HOM05D005311 ORTHO05D006160 6.4e-40 168.3 164 59.1
BcaC08g43180 Brassica carinata HOM05D005311 ORTHO05D006160 8.4e-40 167.9 163 60.1
A06p03410 Brassica napus HOM05D005311 ORTHO05D006160 8.4e-40 167.9 182 55.5
C06p04800 Brassica napus HOM05D005311 ORTHO05D006160 8.4e-40 167.9 164 59.1
BolC6t35609H Brassica oleracea HOM05D005311 ORTHO05D006160 8.4e-40 167.9 163 60.1
BraA06t23549Z Brassica rapa HOM05D005311 ORTHO05D006160 8.4e-40 167.9 182 55.5
GSVIVG01009264001 Vitis vinifera HOM05D005311 ORTHO05D006160 6.0e-38 161.8 164 53.7
CDE02G2678 Ceratophyllum demersum HOM05D005427 ORTHO05D006160 3.0e-37 159.5 170 51.2
TPR.G21150 Trifolium pratense HOM05D005311 ORTHO05D006160 3.9e-37 159.1 132 64.4
Dinv09534 Davidia involucrata HOM05D000211 ORTHO05D002517 5.1e-37 158.7 182 51.6
Zm00001eb201730 Zea mays HOM05D005311 ORTHO05D006160 1.9e-36 156.8 175 52.6
BcaB04g17278 Brassica carinata HOM05D005311 ORTHO05D006160 3.3e-36 156.0 137 61.3
Sabra09G0065400 Salix brachista HOM05D000308 ORTHO05D002517 3.3e-36 156.0 110 73.6
EL10Ac9g22172 Beta vulgaris HOM05D005311 ORTHO05D006160 7.3e-36 154.8 183 54.1
unitig_61.g26039 Utricularia gibba HOM05D005311 ORTHO05D006160 7.3e-36 154.8 164 53.7
Psat6g210680 Pisum sativum HOM05D005311 ORTHO05D006160 4.8e-35 152.1 131 61.1
arahy.Tifrunner.gnm1.ann1.YXS8EF Arachis hypogaea HOM05D005311 ORTHO05D006160 3.4e-33 146.0 146 55.5
PGR142G3492 Punica granatum HOM05D005311 ORTHO05D006160 7.6e-33 144.8 177 50.3
unitig_60.g25463 Utricularia gibba HOM05D005311 ORTHO05D006160 2.9e-32 142.9 177 48.0
Os11g0549900 Oryza sativa ssp. japonica HOM05D005311 ORTHO05D006160 8.4e-32 141.4 152 52.6
SMO118G0105 Selaginella moellendorffii HOM05D005311 ORTHO05D006160 8.1e-27 124.8 221 37.6
Oeu025305.1 Olea europaea HOM05D005311 ORTHO05D006160 1.4e-26 124.0 109 63.3
CDE04G0288 Ceratophyllum demersum HOM05D005311 ORTHO05D006160 2.2e-24 116.7 89 65.2
CSS0025480 Camellia sinensis var. sinensis HOM05D005311 ORTHO05D006160 2.9e-24 116.3 153 51.0
Pp3c9_20640 Physcomitrium patens HOM05D005311 ORTHO05D006160 3.8e-24 115.9 155 43.9
arahy.Tifrunner.gnm1.ann1.YSC4AN Arachis hypogaea HOM05D005311 ORTHO05D006160 1.1e-23 114.4 146 45.2
Oeu037691.1 Olea europaea HOM05D005311 ORTHO05D006160 1.4e-23 114.0 95 68.4
Mapoly0159s0003 Marchantia polymorpha HOM05D005311 ORTHO05D006160 5.5e-23 112.1 151 42.4
Haze_10287 Corylus avellana HOM05D005311 ORTHO05D006160 3.5e-22 109.4 81 70.4
TAR365G0893 Trochodendron aralioides HOM05D005311 ORTHO05D006160 7.9e-22 108.2 154 48.7
Cfa004693 Carpinus fangiana HOM05D005311 ORTHO05D006160 2.3e-21 106.7 77 74.0
SGA_v2.0_scaffold225G43064 Striga asiatica HOM05D005311 ORTHO05D006160 1.5e-20 104.0 147 51.0
arahy.Tifrunner.gnm1.ann1.6ZTX4G Arachis hypogaea HOM05D005311 ORTHO05D006160 4.3e-20 102.4 141 43.3
vmacro22259 Vaccinium macrocarpon HOM05D005311 ORTHO05D006160 2.0e-17 93.6 146 45.2
AagrBONN_evm.TU.Sc2ySwM_340.346 Anthoceros agrestis HOM05D005311 ORTHO05D006160 3.4e-17 92.8 154 39.6
Dinv16067 Davidia involucrata HOM05D005311 ORTHO05D006160 5.8e-17 92.0 119 47.9
Dinv44912 Davidia involucrata HOM05D005311 ORTHO05D006160 3.2e-15 86.3 98 51.0
CDE02G0336 Ceratophyllum demersum HOM05D005311 ORTHO05D006160 2.1e-14 83.6 99 50.5
Rhsim05G0093200 Rhododendron simsii HOM05D005311 ORTHO05D006160 1.5e-12 77.4 198 34.8
arahy.Tifrunner.gnm1.ann1.TC5M0Q Arachis hypogaea HOM05D005311 ORTHO05D006160 1.9e-12 77.0 131 38.2
Cre14.g614000 Chlamydomonas reinhardtii HOM05D005311 ORTHO05D006160 5.7e-12 75.5 89 44.9
HPP92_006035 Vanilla planifolia HOM05D005311 ORTHO05D006160 9.6e-12 74.7 118 48.3
CARHR113150 Cardamine hirsuta HOM05D005311 ORTHO05D006160 1.4e-10 70.9 53 62.3
CSS0010436 Camellia sinensis var. sinensis HOM05D005311 ORTHO05D006160 1.2e-09 67.8 38 76.3
arahy.Tifrunner.gnm1.ann1.HG6PX3 Arachis hypogaea HOM05D005311 ORTHO05D006160 3.4e-09 66.2 130 35.4
CBR_g12748 Chara braunii HOM05D000019 ORTHO05D000048 4.5e-09 65.9 72 45.8
SEGI_31449 Sequoiadendron giganteum HOM05D005311 ORTHO05D006160 4.2e-07 59.3 114 44.7


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