Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN27G0012 Fragaria x ananassa HOM05D007355 ORTHO05D009343 1.2e-71 273.1 138 100.0
FAN15G2202 Fragaria x ananassa HOM05D007355 ORTHO05D009343 1.3e-70 269.6 138 99.3
FAN20G0162 Fragaria x ananassa HOM05D007355 ORTHO05D009343 1.2e-63 246.5 138 93.5
QL02p011487 Quercus lobata HOM05D007355 ORTHO05D009343 1.8e-27 126.3 120 59.2
CiPaw.08G065900 Carya illinoinensis HOM05D007355 ORTHO05D009343 2.6e-26 122.5 125 56.0
Thecc.08G043500 Theobroma cacao HOM05D007355 ORTHO05D009343 9.8e-26 120.6 119 57.1
Lalb_Chr14g0369841 Lupinus albus HOM05D007355 ORTHO05D009343 8.3e-25 117.5 135 54.8
COL.COLO4_26156 Corchorus olitorius HOM05D007355 ORTHO05D009343 2.4e-24 115.9 114 57.9
Glyma.06G024800 Glycine max HOM05D007355 ORTHO05D009343 2.4e-24 115.9 126 54.0
Gorai.009G194900 Gossypium raimondii HOM05D007355 ORTHO05D009343 5.4e-24 114.8 121 57.0
Dinv39511 Davidia involucrata HOM05D007355 ORTHO05D009343 7.0e-24 114.4 125 53.6
Gohir.A06G004700 Gossypium hirsutum HOM05D007355 ORTHO05D009343 7.0e-24 114.4 112 56.2
Manes.18G014200 Manihot esculenta HOM05D007355 ORTHO05D009343 1.2e-23 113.6 118 52.5
Gohir.D06G000500 Gossypium hirsutum HOM05D007355 ORTHO05D009343 2.7e-23 112.5 112 55.4
Gorai.010G004900 Gossypium raimondii HOM05D007355 ORTHO05D009343 2.7e-23 112.5 112 55.4
Phvul.009G016500 Phaseolus vulgaris HOM05D007355 ORTHO05D009343 2.7e-23 112.5 120 54.2
Gohir.D05G189650 Gossypium hirsutum HOM05D007355 ORTHO05D009343 4.6e-23 111.7 121 56.2
Lj5g0016063 Lotus japonicus HOM05D007355 ORTHO05D009343 5.9e-23 111.3 130 53.1
MD15G1013100 Malus domestica HOM05D007355 ORTHO05D009343 5.9e-23 111.3 80 77.5
TAR625G0791 Trochodendron aralioides HOM05D007355 ORTHO05D009343 7.8e-23 110.9 111 57.7
Manes.05G148200 Manihot esculenta HOM05D007355 ORTHO05D009343 1.0e-22 110.5 122 54.1
PGR083G2600 Punica granatum HOM05D007355 ORTHO05D009343 2.3e-22 109.4 126 54.0
Gohir.A05G186732 Gossypium hirsutum HOM05D007355 ORTHO05D009343 2.9e-22 109.0 121 56.2
Prupe.1G366200 Prunus persica HOM05D007355 ORTHO05D009343 2.9e-22 109.0 101 66.3
TPR.G26402 Trifolium pratense HOM05D007355 ORTHO05D009343 2.9e-22 109.0 120 56.7
Sabra05G0184200 Salix brachista HOM05D007355 ORTHO05D009343 5.0e-22 108.2 116 54.3
Cpa.g.sc26.34 Carica papaya HOM05D007355 ORTHO05D009343 1.5e-21 106.7 107 56.1
Potri.005G238400 Populus trichocarpa HOM05D007355 ORTHO05D009343 2.5e-21 105.9 116 50.0
Duzib093G0416 Durio zibethinus HOM05D007355 ORTHO05D009343 3.3e-21 105.5 81 67.9
CiPaw.07G150900 Carya illinoinensis HOM05D007355 ORTHO05D009343 4.3e-21 105.1 113 54.0
PGSC0003DMG400009860 Solanum tuberosum HOM05D007355 ORTHO05D009343 4.3e-21 105.1 115 55.7
Haze_22626 Corylus avellana HOM05D007355 ORTHO05D009343 5.6e-21 104.8 81 69.1
Glyma.04G024700 Glycine max HOM05D007355 ORTHO05D009343 5.6e-21 104.8 128 51.6
Solyc04g081380.1 Solanum lycopersicum HOM05D007355 ORTHO05D009343 7.3e-21 104.4 114 55.3
VMungo1309G0669 Vigna mungo HOM05D007355 ORTHO05D009343 1.6e-20 103.2 123 52.8
Ciclev10003277m.g Citrus clementina HOM05D007355 ORTHO05D009343 2.1e-20 102.8 81 66.7
Cfa013942 Carpinus fangiana HOM05D007355 ORTHO05D009343 8.0e-20 100.9 81 66.7
Actinidia37930 Actinidia chinensis HOM05D007355 ORTHO05D009343 1.0e-19 100.5 111 55.9
Lj1g0016145 Lotus japonicus HOM05D007355 ORTHO05D009343 1.8e-19 99.8 119 52.9
arahy.Tifrunner.gnm1.ann1.Y2NNQI Arachis hypogaea HOM05D007355 ORTHO05D009343 2.3e-19 99.4 109 54.1
Ca_13424_v3 Cicer arietinum L. HOM05D007355 ORTHO05D009343 6.8e-19 97.8 77 66.2
Ca_13425_v3 Cicer arietinum L. HOM05D007355 ORTHO05D009343 6.8e-19 97.8 77 66.2
ClCG05G018320 Citrullus lanatus HOM05D007355 ORTHO05D009343 1.2e-18 97.1 92 58.7
arahy.Tifrunner.gnm1.ann1.PADY8Y Arachis hypogaea HOM05D007355 ORTHO05D009343 1.5e-18 96.7 94 58.5
Peaxi162Scf00400g00042 Petunia axillaris HOM05D007355 ORTHO05D009343 1.5e-18 96.7 128 50.0
Nn1g05885 Nelumbo nucifera HOM05D007355 ORTHO05D009343 4.4e-18 95.1 118 52.5
MBI05_g15356_MAGBIO Magnolia biondii HOM05D007355 ORTHO05D009343 7.5e-18 94.4 107 53.3
Gohir.A05G257150 Gossypium hirsutum HOM05D007355 ORTHO05D009343 9.8e-18 94.0 82 63.4
Gorai.009G270200 Gossypium raimondii HOM05D007355 ORTHO05D009343 9.8e-18 94.0 82 63.4
ClCG08G014360 Citrullus lanatus HOM05D007355 ORTHO05D009343 1.3e-17 93.6 118 44.9
CsaV3_3G045820 Cucumis sativus L. HOM05D007355 ORTHO05D009343 1.7e-17 93.2 109 53.2
Sed0024841 Sechium edule HOM05D007355 ORTHO05D009343 1.7e-17 93.2 118 46.6
DCAR_017465 Daucus carota HOM05D007355 ORTHO05D009343 2.9e-17 92.4 144 45.8
MELO3C011006.2 Cucumis melo HOM05D007355 ORTHO05D009343 8.3e-17 90.9 132 41.7
Nn5g30158 Nelumbo nucifera HOM05D007355 ORTHO05D009343 1.4e-16 90.1 124 50.8
Gohir.D05G258650 Gossypium hirsutum HOM05D007355 ORTHO05D009343 2.4e-16 89.4 81 60.5
AL1G32690 Arabidopsis lyrata HOM05D007355 ORTHO05D009343 3.2e-16 89.0 85 55.3
CsaV3_2G029470 Cucumis sativus L. HOM05D007355 ORTHO05D009343 4.1e-16 88.6 132 41.7
Hma1.2p1_0638F.1_g193820 Hydrangea macrophylla HOM05D007355 ORTHO05D009343 4.1e-16 88.6 110 48.2
Sed0019478 Sechium edule HOM05D007355 ORTHO05D009343 5.4e-16 88.2 91 54.9
CSS0013130 Camellia sinensis var. sinensis HOM05D007355 ORTHO05D009343 9.2e-16 87.4 82 59.8
Carub.0001s1949 Capsella rubella HOM05D007355 ORTHO05D009343 1.2e-15 87.0 85 55.3
Lalb_Chr22g0354351 Lupinus albus HOM05D007355 ORTHO05D009343 1.2e-15 87.0 86 54.7
CARHR020450 Cardamine hirsuta HOM05D007355 ORTHO05D009343 2.0e-15 86.3 95 55.8
Aqoxy5G01778 Aquilegia oxysepala HOM05D007355 ORTHO05D009343 7.8e-15 84.3 122 48.4
Lsat_1_v5_gn_2_9841 Lactuca sativa HOM05D007355 ORTHO05D009343 7.8e-15 84.3 120 47.5
BcaC07g39013 Brassica carinata HOM05D007355 ORTHO05D009343 1.3e-14 83.6 87 57.5
A08p29560 Brassica napus HOM05D007355 ORTHO05D009343 1.3e-14 83.6 87 57.5
C08p19840 Brassica napus HOM05D007355 ORTHO05D009343 1.3e-14 83.6 87 57.5
BolC8t49623H Brassica oleracea HOM05D007355 ORTHO05D009343 1.3e-14 83.6 87 57.5
BraA08t34894Z Brassica rapa HOM05D007355 ORTHO05D009343 1.3e-14 83.6 87 57.5
Medtr1g025150 Medicago truncatula HOM05D007355 ORTHO05D009343 1.3e-14 83.6 77 59.7
Aa31LG4G5940 Aethionema arabicum HOM05D007355 ORTHO05D009343 1.7e-14 83.2 79 57.0
THA.LOC104814032 Tarenaya hassleriana HOM05D007355 ORTHO05D009343 2.3e-14 82.8 84 54.8
BcaB03g14421 Brassica carinata HOM05D007355 ORTHO05D009343 5.0e-14 81.6 84 54.8
Eucgr.F01645 Eucalyptus grandis HOM05D007355 ORTHO05D009343 5.0e-14 81.6 77 59.7
BcaC08g47049 Brassica carinata HOM05D007355 ORTHO05D009343 1.1e-13 80.5 103 49.5
SalBow7G4291 Salvia bowleyana HOM05D007355 ORTHO05D009343 1.1e-13 80.5 88 56.8
C06p49660 Brassica napus HOM05D007355 ORTHO05D009343 1.5e-13 80.1 96 52.1
BolC6t40005H Brassica oleracea HOM05D007355 ORTHO05D009343 1.5e-13 80.1 96 52.1
DCAR_013865 Daucus carota HOM05D007355 ORTHO05D009343 1.9e-13 79.7 112 47.3
Sp1g17750 Schrenkiella parvula HOM05D007355 ORTHO05D009343 1.9e-13 79.7 84 56.0
Thhalv10009918m.g Eutrema salsugineum HOM05D007355 ORTHO05D009343 2.5e-13 79.3 100 53.0
Thhalv10019842m.g Eutrema salsugineum HOM05D007355 ORTHO05D009343 4.3e-13 78.6 91 52.7
BcaB03g14350 Brassica carinata HOM05D007355 ORTHO05D009343 7.3e-13 77.8 79 58.2
A07p41240 Brassica napus HOM05D007355 ORTHO05D009343 7.3e-13 77.8 96 51.0
BraA07t31659Z Brassica rapa HOM05D007355 ORTHO05D009343 7.3e-13 77.8 96 51.0
Sc15g0005040 Simmondsia chinensis HOM05D007355 ORTHO05D009343 1.6e-12 76.6 85 52.9
Rhsim07G0246800 Rhododendron simsii HOM05D007355 ORTHO05D009343 4.7e-12 75.1 91 48.4
AT1G75717 Arabidopsis thaliana HOM05D007355 ORTHO05D009343 6.2e-12 74.7 92 54.3
Ah.11g039070 Amaranthus hybridus HOM05D007355 ORTHO05D009343 1.1e-11 73.9 82 54.9
BcaB02g07039 Brassica carinata HOM05D007355 ORTHO05D009343 1.8e-11 73.2 88 51.1
BcaC08g45561 Brassica carinata HOM05D007355 ORTHO05D009343 3.1e-11 72.4 92 50.0
AL2G35700 Arabidopsis lyrata HOM05D007355 ORTHO05D009343 5.2e-11 71.6 90 50.0
CARHR069120 Cardamine hirsuta HOM05D007355 ORTHO05D009343 6.8e-11 71.2 90 52.2
CAN.G311.23 Capsicum annuum HOM05D007355 ORTHO05D009343 8.9e-11 70.9 54 72.2
Atru.chr13.303 Acer truncatum HOM05D007355 ORTHO05D009343 1.5e-10 70.1 82 51.2
BcaB03g12886 Brassica carinata HOM05D007355 ORTHO05D009343 2.0e-10 69.7 86 47.7
C06p32480 Brassica napus HOM05D007355 ORTHO05D009343 2.0e-10 69.7 92 47.8
BolC6t38371H Brassica oleracea HOM05D007355 ORTHO05D009343 2.0e-10 69.7 92 47.8
Migut.C00824 Erythranthe guttata HOM05D007355 ORTHO05D009343 2.0e-10 69.7 85 52.9
SGA_v2.0_scaffold92G28242 Striga asiatica HOM05D004656 ORTHO05D005404 3.7e-09 65.5 91 46.2
Carub.0002s2256 Capsella rubella HOM05D007355 ORTHO05D009343 4.9e-09 65.1 81 53.1


User provided reference genes

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