Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN26G3439 Fragaria x ananassa HOM05D002451 ORTHO05D007901 0.0e+00 1086.2 527 100.0
FAN26G0432 Fragaria x ananassa HOM05D002451 ORTHO05D007901 3.6e-312 1073.9 527 98.9
FAN23G2627 Fragaria x ananassa HOM05D002451 ORTHO05D007901 7.2e-312 1073.2 527 98.3
FAN28G1338 Fragaria x ananassa HOM05D002451 ORTHO05D007901 1.4e-309 1065.4 527 97.9
RcHm_v2.0_Chr2g0091831 Rosa chinensis HOM05D002451 ORTHO05D007901 5.7e-284 980.3 537 89.6
MD02G1065300 Malus domestica HOM05D002451 ORTHO05D007901 2.1e-241 839.0 527 78.0
FAN19G3003 Fragaria x ananassa HOM05D002451 ORTHO05D007901 3.3e-239 831.6 411 97.3
FvH4_1g06070 Fragaria vesca HOM05D002451 ORTHO05D007901 4.6e-233 811.2 409 97.1
Atru.chr7.1460 Acer truncatum HOM05D002451 ORTHO05D007901 4.0e-221 771.5 521 72.4
CiPaw.03G225500 Carya illinoinensis HOM05D002451 ORTHO05D007901 9.3e-218 760.4 520 72.1
CANSAT56G2212 Cannabis sativa HOM05D002451 ORTHO05D007901 2.3e-216 755.7 521 70.4
CSS0003026 Camellia sinensis var. sinensis HOM05D002451 ORTHO05D007901 1.3e-214 750.0 532 69.0
TAR636G2911 Trochodendron aralioides HOM05D002451 ORTHO05D005601 2.8e-214 748.8 519 69.6
Lalb_Chr05g0223211 Lupinus albus HOM05D002451 ORTHO05D007901 6.9e-213 744.2 521 70.4
ClCG11G002150 Citrullus lanatus HOM05D002451 ORTHO05D007901 5.5e-210 734.6 520 68.8
Duzib168G1562 Durio zibethinus HOM05D002451 ORTHO05D007901 2.1e-209 732.6 520 69.4
Gorai.009G027400 Gossypium raimondii HOM05D002451 ORTHO05D007901 3.5e-209 731.9 521 69.5
GSVIVG01015305001 Vitis vinifera HOM05D002451 ORTHO05D007901 7.9e-209 730.7 522 69.3
Lj4g0024953 Lotus japonicus HOM05D002451 ORTHO05D007901 1.8e-208 729.6 528 68.9
CsaV3_2G001930 Cucumis sativus L. HOM05D002451 ORTHO05D007901 6.3e-206 721.1 520 67.3
arahy.Tifrunner.gnm1.ann1.GUCG30 Arachis hypogaea HOM05D002451 ORTHO05D007901 8.2e-206 720.7 520 68.7
Psat7g017040 Pisum sativum HOM05D002451 ORTHO05D007901 1.1e-205 720.3 528 68.2
vmacro06250 Vaccinium macrocarpon HOM05D002451 ORTHO05D007901 5.3e-205 718.0 528 67.2
Potri.018G087300 Populus trichocarpa HOM05D002451 ORTHO05D007901 1.2e-204 716.8 524 67.2
Hma1.2p1_0571F.1_g180680 Hydrangea macrophylla HOM05D002451 ORTHO05D007901 5.9e-204 714.5 521 67.8
Actinidia32654 Actinidia chinensis HOM05D002451 ORTHO05D007901 2.9e-203 712.2 525 65.7
Sc08g0008000 Simmondsia chinensis HOM05D002451 ORTHO05D007901 2.9e-203 712.2 509 67.2
Medtr8g102540 Medicago truncatula HOM05D002451 ORTHO05D007901 1.1e-202 710.3 524 67.9
Eucgr.C00999 Eucalyptus grandis HOM05D002451 ORTHO05D007901 2.3e-200 702.6 534 66.1
Aqoxy7G01412 Aquilegia oxysepala HOM05D002451 ORTHO05D007901 6.7e-200 701.0 518 64.7
Glyma.05G227000 Glycine max HOM05D002451 ORTHO05D007901 1.1e-199 700.3 526 68.3
Solyc12g008450.2 Solanum lycopersicum HOM05D002451 ORTHO05D007901 1.8e-197 693.0 526 65.4
Dinv36690 Davidia involucrata HOM05D002451 ORTHO05D007901 3.1e-197 692.2 489 69.7
CARHR135670 Cardamine hirsuta HOM05D002451 ORTHO05D007901 5.9e-196 688.0 519 65.9
PGSC0003DMG400000298 Solanum tuberosum HOM05D002451 ORTHO05D007901 7.7e-196 687.6 526 65.2
BcaB06g29152 Brassica carinata HOM05D002451 ORTHO05D007901 1.7e-195 686.4 529 64.3
Rhsim03G0237000 Rhododendron simsii HOM05D002451 ORTHO05D007901 1.7e-195 686.4 534 63.9
Sopen12g003400 Solanum pennellii HOM05D002451 ORTHO05D007901 2.2e-195 686.0 526 65.0
Sp4g22900 Schrenkiella parvula HOM05D002451 ORTHO05D007901 3.8e-195 685.3 526 64.1
EL10Ac8g18383 Beta vulgaris HOM05D002451 ORTHO05D007901 5.0e-195 684.9 532 63.7
A04p31020 Brassica napus HOM05D002451 ORTHO05D007901 6.5e-195 684.5 529 64.1
AL4G38420 Arabidopsis lyrata HOM05D002451 ORTHO05D007901 1.9e-194 682.9 515 65.6
BcaC02g07322 Brassica carinata HOM05D002451 ORTHO05D007901 1.9e-194 682.9 529 63.9
Oeu053181.2 Olea europaea HOM05D002451 ORTHO05D007901 1.9e-194 682.9 518 64.5
BolC4t28342H Brassica oleracea HOM05D002451 ORTHO05D007901 2.5e-194 682.6 529 63.7
C04p68410 Brassica napus HOM05D002451 ORTHO05D007901 4.2e-194 681.8 529 63.7
Nitab4.5_0005668g0020 Nicotiana tabacum HOM05D002451 ORTHO05D007901 5.5e-194 681.4 511 65.9
BraA04t18559Z Brassica rapa HOM05D002451 ORTHO05D007901 7.2e-194 681.0 529 63.9
AT2G40570 Arabidopsis thaliana HOM05D002451 ORTHO05D007901 3.6e-193 678.7 525 64.8
Cc06_g10440 Coffea canephora HOM05D002451 ORTHO05D007901 1.0e-192 677.2 528 64.0
MBI04_g20306_MAGBIO Magnolia biondii HOM05D002451 ORTHO05D007901 6.7e-192 674.5 514 64.2
MELO3C004587.2 Cucumis melo HOM05D002451 ORTHO05D007901 5.7e-191 671.4 511 65.2
Thhalv10016464m.g Eutrema salsugineum HOM05D002451 ORTHO05D007901 1.7e-190 669.8 551 62.4
Prupe.7G220200 Prunus persica HOM05D002451 ORTHO05D007901 2.8e-190 669.1 431 78.7
COL.COLO4_34751 Corchorus olitorius HOM05D002451 ORTHO05D007901 5.3e-189 664.8 515 64.3
THA.LOC104807537 Tarenaya hassleriana HOM05D002451 ORTHO05D007901 3.5e-188 662.1 516 63.0
Lj7A665T28 Lonicera japonica HOM05D002451 ORTHO05D007901 7.7e-188 661.0 633 55.5
Ca_17363_v3 Cicer arietinum L. HOM05D002451 ORTHO05D007901 3.8e-187 658.7 484 68.4
MSTRG.10604 Avicennia marina HOM05D002451 ORTHO05D007901 1.4e-186 656.8 526 62.7
TWI34G1500 Tripterygium wilfordii HOM05D002451 ORTHO05D007901 1.9e-186 656.4 480 68.1
HPP92_009804 Vanilla planifolia HOM05D002451 ORTHO05D007901 3.3e-183 645.6 521 60.7
Aa31LG3G1530 Aethionema arabicum HOM05D002451 ORTHO05D007901 6.3e-182 641.3 621 54.4
TPR.G23434 Trifolium pratense HOM05D002451 ORTHO05D007901 6.3e-182 641.3 479 67.6
Lsat_1_v5_gn_7_39761 Lactuca sativa HOM05D002451 ORTHO05D007901 1.1e-181 640.6 509 62.1
ATR0705G045 Amborella trichopoda HOM05D002451 ORTHO05D007901 2.4e-181 639.4 533 59.1
Sabra18G0075400 Salix brachista HOM05D002451 ORTHO05D007901 2.2e-179 632.9 565 57.5
PGR142G3373 Punica granatum HOM05D002451 ORTHO05D007901 5.0e-179 631.7 479 66.6
Ah.14g083250 Amaranthus hybridus HOM05D002451 ORTHO05D007901 3.6e-177 625.5 523 61.4
PSO063G0860 Papaver somniferum HOM05D002451 ORTHO05D007901 3.6e-177 625.5 465 65.6
Os06g0555500 Oryza sativa ssp. japonica HOM05D002451 ORTHO05D007901 2.0e-175 619.8 517 59.2
DCAR_012039 Daucus carota HOM05D002451 ORTHO05D007901 9.7e-175 617.5 466 64.6
Sed0018496 Sechium edule HOM05D002451 ORTHO05D007901 1.3e-174 617.1 456 67.3
VMungo0251G0535 Vigna mungo HOM05D002451 ORTHO05D007901 3.7e-174 615.5 457 68.9
SHI02693 Sapria himalayana HOM05D002451 ORTHO05D007901 6.3e-174 614.8 535 58.3
SalBow1G3696 Salvia bowleyana HOM05D002451 ORTHO05D007901 1.1e-173 614.0 531 59.1
SalBow1G8658 Salvia bowleyana HOM05D002451 ORTHO05D007901 9.1e-173 610.9 531 59.3
Hund09106 Selenicereus undatus HOM05D002451 ORTHO05D007901 3.8e-171 605.5 601 54.2
AUR62010914 Chenopodium quinoa HOM05D002451 ORTHO05D007901 5.5e-170 601.7 522 58.2
Peaxi162Scf00665g00035 Petunia axillaris HOM05D002451 ORTHO05D007901 8.0e-169 597.8 524 58.8
Migut.K00538 Erythranthe guttata HOM05D002451 ORTHO05D007901 2.3e-168 596.3 513 59.6
Ciclev10008594m.g Citrus clementina HOM05D002451 ORTHO05D007901 7.7e-164 581.3 379 73.6
SEGI_00986 Sequoiadendron giganteum HOM05D002451 ORTHO05D007901 3.8e-163 578.9 546 54.0
Nn8g39075 Nelumbo nucifera HOM05D002451 ORTHO05D007901 2.5e-162 576.2 442 66.3
Cfa003184 Carpinus fangiana HOM05D002451 ORTHO05D007901 4.2e-162 575.5 415 69.4
Manes.16G108300 Manihot esculenta HOM05D002451 ORTHO05D007901 5.4e-157 558.5 430 64.4
Hma1.2p1_0571F.1_g180690 Hydrangea macrophylla HOM05D002451 ORTHO05D007901 1.9e-154 550.1 423 65.5
Thecc.09G101000 Theobroma cacao HOM05D002451 ORTHO05D007901 3.6e-153 545.8 406 67.0
Zm00001eb384640 Zea mays HOM05D002451 ORTHO05D007901 6.1e-153 545.0 475 57.3
Pp3c1_19270 Physcomitrium patens HOM05D002451 ORTHO05D007901 3.9e-147 525.8 567 49.2
Mapoly0002s0306 Marchantia polymorpha HOM05D002451 ORTHO05D007901 2.5e-146 523.1 546 49.6
Gohir.A05G025800 Gossypium hirsutum HOM05D002451 ORTHO05D007901 8.9e-144 514.6 407 64.9
SGA_v2.0_scaffold843G53664 Striga asiatica HOM05D002451 ORTHO05D007901 7.5e-143 511.5 456 58.6
CAN.G1241.33 Capsicum annuum HOM05D002451 ORTHO05D007901 1.4e-141 507.3 378 66.7
SpUn0061_0010 Schrenkiella parvula HOM05D002451 ORTHO05D007901 1.5e-138 497.3 378 63.5
Phvul.002G309000 Phaseolus vulgaris HOM05D002451 ORTHO05D007901 1.2e-137 494.2 405 63.7
AagrBONN_evm.TU.Sc2ySwM_117.4166 Anthoceros agrestis HOM05D002451 ORTHO05D007901 1.7e-134 483.8 509 51.1
AUR62021412 Chenopodium quinoa HOM05D002451 ORTHO05D007901 1.2e-132 477.6 440 56.1
HanXRQChr09g0238871 Helianthus annuus HOM05D002451 ORTHO05D007901 1.5e-130 470.7 374 61.5
MD15G1196200 Malus domestica HOM05D002451 ORTHO05D007901 1.2e-129 467.6 521 51.6
SMO118G0195 Selaginella moellendorffii HOM05D002451 ORTHO05D007901 1.3e-126 457.6 538 47.2
Carub.0004s2284 Capsella rubella HOM05D002451 ORTHO05D007901 6.4e-126 455.3 376 62.5
CAN.G1642.1 Capsicum annuum HOM05D002451 ORTHO05D007901 2.4e-125 453.4 425 55.8
TAR636G1745 Trochodendron aralioides HOM05D002451 ORTHO05D007901 6.6e-115 418.7 388 57.0
CDE08G0666 Ceratophyllum demersum HOM05D002257 ORTHO05D007901 3.6e-113 412.9 365 58.1
SGA_v2.0_scaffold19G08736 Striga asiatica HOM05D002451 ORTHO05D007901 9.0e-96 355.1 243 68.7
Gohir.D05G027300 Gossypium hirsutum HOM05D002451 ORTHO05D007901 1.9e-90 337.4 272 63.2
CBR_g41536 Chara braunii HOM05D002451 ORTHO05D007901 3.4e-79 300.1 510 36.5
MCO03G573 Micromonas commoda HOM05D002451 ORTHO05D007901 1.1e-69 268.5 586 33.6
unitig_46.g18399 Utricularia gibba HOM05D002451 ORTHO05D007901 9.4e-69 265.4 267 51.7
ECA240G2417 Erigeron canadensis HOM05D002451 ORTHO05D007901 3.6e-68 263.5 418 40.7
QL02p041683 Quercus lobata HOM05D002451 ORTHO05D007901 4.7e-68 263.1 144 83.3
SGA_v2.0_scaffold4172G54434 Striga asiatica HOM05D002451 ORTHO05D007901 3.0e-67 260.4 244 55.7
SGA_v2.0_scaffold19G08729 Striga asiatica HOM05D002451 ORTHO05D007901 5.7e-58 229.6 141 74.5
PRCOL_00006066 Prasinoderma coloniale HOM05D000173 ORTHO05D004400 2.3e-51 207.6 540 30.2
CDE02G1621 Ceratophyllum demersum HOM05D002451 ORTHO05D007901 5.0e-46 189.9 148 61.5
Nn1g07675 Nelumbo nucifera HOM05D002451 ORTHO05D007901 1.2e-44 185.3 112 77.7
CAN.G4309.1 Capsicum annuum HOM05D002451 ORTHO05D007901 2.1e-44 184.5 141 64.5
Cre06.g272100 Chlamydomonas reinhardtii HOM05D002451 ORTHO05D007901 2.0e-42 177.9 149 55.0
Nitab4.5_0000566g0090 Nicotiana tabacum HOM05D002451 ORTHO05D007901 9.2e-40 169.1 94 80.9
Cpa.g.c44357 Carica papaya HOM05D002451 ORTHO05D007901 1.3e-38 165.2 140 62.9
Cpa.g.sc40.100 Carica papaya HOM05D002451 ORTHO05D007901 1.1e-37 162.2 97 78.4
unitig_46.g18400 Utricularia gibba HOM05D002451 ORTHO05D007901 5.4e-32 143.3 98 68.4
Ciclev10010851m.g Citrus clementina HOM05D002451 ORTHO05D007901 4.6e-23 113.6 71 74.6
CBR_g41538 Chara braunii HOM05D002451 ORTHO05D007901 2.2e-17 94.7 110 47.3
TAR636G3106 Trochodendron aralioides HOM05D002451 ORTHO05D007901 7.8e-15 86.3 53 71.7
TPR.G23499 Trifolium pratense HOM05D002451 ORTHO05D007901 8.1e-12 76.3 51 66.7


User provided reference genes

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