Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN26G3434 Fragaria x ananassa HOM05D006529 ORTHO05D008380 9.2e-80 300.1 140 100.0
FvH4_1g06740 Fragaria vesca HOM05D006529 ORTHO05D008380 9.2e-48 193.7 131 75.6
FAN14G0658 Fragaria x ananassa HOM05D006529 ORTHO05D008380 9.2e-48 193.7 131 75.6
FAN19G1593 Fragaria x ananassa HOM05D006529 ORTHO05D008380 9.2e-48 193.7 131 75.6
FAN23G2505 Fragaria x ananassa HOM05D006529 ORTHO05D008380 6.0e-47 191.0 131 74.0
FAN26G1500 Fragaria x ananassa HOM05D006529 ORTHO05D008380 6.0e-47 191.0 129 75.2
Prupe.7G215100 Prunus persica HOM05D006529 ORTHO05D008380 1.7e-41 172.9 131 65.6
RcHm_v2.0_Chr2g0092481 Rosa chinensis HOM05D006529 ORTHO05D008380 1.7e-41 172.9 129 65.9
MD02G1072300 Malus domestica HOM05D006529 ORTHO05D008380 3.8e-41 171.8 140 61.4
Cfa003138 Carpinus fangiana HOM05D006529 ORTHO05D008380 6.0e-39 164.5 129 62.0
Haze_25864 Corylus avellana HOM05D006529 ORTHO05D008380 6.0e-39 164.5 129 62.8
MD15G1202100 Malus domestica HOM05D006529 ORTHO05D008380 6.0e-39 164.5 131 63.4
CSS0016193 Camellia sinensis var. sinensis HOM05D006529 ORTHO05D008380 5.1e-38 161.4 131 58.8
QL02p063543 Quercus lobata HOM05D006529 ORTHO05D008380 8.7e-38 160.6 129 60.5
Manes.16G105400 Manihot esculenta HOM05D006529 ORTHO05D008380 4.3e-37 158.3 131 58.8
Dinv42286 Davidia involucrata HOM05D006529 ORTHO05D008380 9.6e-37 157.1 129 57.4
Hund07265 Selenicereus undatus HOM05D006529 ORTHO05D008380 1.6e-36 156.4 126 60.3
Dinv36729 Davidia involucrata HOM05D006529 ORTHO05D008380 1.1e-35 153.7 131 56.5
Lj7C671T1 Lonicera japonica HOM05D006529 ORTHO05D008380 1.4e-35 153.3 131 56.5
CiPaw.04G153200 Carya illinoinensis HOM05D006529 ORTHO05D008380 3.1e-35 152.1 129 58.1
Potri.006G153800 Populus trichocarpa HOM05D006529 ORTHO05D008380 5.3e-35 151.4 126 57.1
TPR.G17281 Trifolium pratense HOM05D006529 ORTHO05D008380 6.9e-35 151.0 133 52.6
COL.COLO4_18251 Corchorus olitorius HOM05D006529 ORTHO05D008380 9.0e-35 150.6 131 55.7
TAR624G0297 Trochodendron aralioides HOM05D006529 ORTHO05D008380 9.0e-35 150.6 131 55.7
Duzib150G0994 Durio zibethinus HOM05D006529 ORTHO05D008380 1.2e-34 150.2 131 55.7
CANSAT56G2962 Cannabis sativa HOM05D006529 ORTHO05D008380 1.5e-34 149.8 129 58.1
Atru.chr7.1518 Acer truncatum HOM05D006529 ORTHO05D008380 2.6e-34 149.1 131 56.5
Glyma.08G031000 Glycine max HOM05D006529 ORTHO05D008380 4.5e-34 148.3 133 54.9
VMungo0251G0255 Vigna mungo HOM05D006529 ORTHO05D008380 5.8e-34 147.9 133 55.6
arahy.Tifrunner.gnm1.ann1.HB8I5Y Arachis hypogaea HOM05D006529 ORTHO05D008380 7.6e-34 147.5 133 53.4
arahy.Tifrunner.gnm1.ann1.YG2MQU Arachis hypogaea HOM05D006529 ORTHO05D008380 7.6e-34 147.5 133 53.4
GSVIVG01015253001 Vitis vinifera HOM05D006529 ORTHO05D008380 7.6e-34 147.5 126 59.5
MELO3C015437.2 Cucumis melo HOM05D006529 ORTHO05D008380 9.9e-34 147.1 131 51.9
AUR62000487 Chenopodium quinoa HOM05D006529 ORTHO05D008380 1.7e-33 146.4 125 55.2
AUR62006831 Chenopodium quinoa HOM05D006529 ORTHO05D008380 1.7e-33 146.4 125 56.0
Lj4g0018594 Lotus japonicus HOM05D006529 ORTHO05D008380 1.7e-33 146.4 133 54.9
Medtr8g101990 Medicago truncatula HOM05D006529 ORTHO05D008380 1.7e-33 146.4 131 55.0
Ca_17386_v3 Cicer arietinum L. HOM05D006529 ORTHO05D008380 2.2e-33 146.0 133 55.6
Thecc.09G094900 Theobroma cacao HOM05D006529 ORTHO05D008380 2.2e-33 146.0 131 55.0
Ah.06g190810 Amaranthus hybridus HOM05D006529 ORTHO05D008380 2.9e-33 145.6 127 57.5
PGR142G1231 Punica granatum HOM05D006529 ORTHO05D008380 4.9e-33 144.8 131 53.4
Cc06_g10920 Coffea canephora HOM05D006529 ORTHO05D008380 8.4e-33 144.1 131 52.7
Eucgr.C00932 Eucalyptus grandis HOM05D006529 ORTHO05D008380 8.4e-33 144.1 131 51.1
Gohir.A05G027800 Gossypium hirsutum HOM05D006529 ORTHO05D008380 1.1e-32 143.7 131 51.9
TWI63G1011 Tripterygium wilfordii HOM05D006529 ORTHO05D008380 1.1e-32 143.7 131 52.7
CsaV3_UNG050340 Cucumis sativus L. HOM05D006529 ORTHO05D008380 1.4e-32 143.3 131 50.4
Gohir.D05G029600 Gossypium hirsutum HOM05D006529 ORTHO05D008380 1.4e-32 143.3 131 51.9
Gorai.009G029800 Gossypium raimondii HOM05D006529 ORTHO05D008380 1.4e-32 143.3 131 51.9
Nn8g38953 Nelumbo nucifera HOM05D006529 ORTHO05D008380 1.4e-32 143.3 131 52.7
ClCG03G015880 Citrullus lanatus HOM05D006529 ORTHO05D008380 1.9e-32 142.9 131 50.4
Oeu052123.2 Olea europaea HOM05D006529 ORTHO05D008380 1.9e-32 142.9 131 51.9
DCAR_012008 Daucus carota HOM05D006529 ORTHO05D008380 4.2e-32 141.7 131 52.7
ECA240G3812 Erigeron canadensis HOM05D006529 ORTHO05D008380 5.4e-32 141.4 138 50.7
vmacro06269 Vaccinium macrocarpon HOM05D006529 ORTHO05D008380 5.4e-32 141.4 125 56.0
Glyma.05G223900 Glycine max HOM05D006529 ORTHO05D008380 9.3e-32 140.6 133 52.6
Lalb_Chr05g0223501 Lupinus albus HOM05D006529 ORTHO05D008380 9.3e-32 140.6 131 53.4
Nitab4.5_0004011g0030 Nicotiana tabacum HOM05D006529 ORTHO05D008380 2.7e-31 139.0 129 50.4
PSO832G0687 Papaver somniferum HOM05D006529 ORTHO05D008380 3.5e-31 138.7 127 52.8
BcaC06g32765 Brassica carinata HOM05D006529 ORTHO05D008380 4.6e-31 138.3 129 50.4
Nn6g35394 Nelumbo nucifera HOM05D006529 ORTHO05D008380 6.0e-31 137.9 131 51.1
A03p56550 Brassica napus HOM05D006529 ORTHO05D008380 1.0e-30 137.1 138 47.8
C07p54750 Brassica napus HOM05D006529 ORTHO05D008380 1.3e-30 136.7 138 48.6
BolC7t45964H Brassica oleracea HOM05D006529 ORTHO05D008380 1.3e-30 136.7 138 48.6
AT4G26240 Arabidopsis thaliana HOM05D006529 ORTHO05D008380 1.8e-30 136.3 138 47.8
Peaxi162Scf00883g01013 Petunia axillaris HOM05D006529 ORTHO05D008380 2.3e-30 136.0 129 50.4
THA.LOC104813489 Tarenaya hassleriana HOM05D006529 ORTHO05D008380 2.3e-30 136.0 138 48.6
Aqoxy7G01329 Aquilegia oxysepala HOM05D006529 ORTHO05D008380 5.1e-30 134.8 131 55.0
AL7G26720 Arabidopsis lyrata HOM05D006529 ORTHO05D008380 6.7e-30 134.4 138 47.1
BraA03t14725Z Brassica rapa HOM05D006529 ORTHO05D008380 6.7e-30 134.4 138 47.1
CAN.G142.8 Capsicum annuum HOM05D006529 ORTHO05D008380 1.1e-29 133.7 129 48.8
Ciclev10009577m.g Citrus clementina HOM05D006529 ORTHO05D008380 1.1e-29 133.7 131 52.7
CARHR233790 Cardamine hirsuta HOM05D006529 ORTHO05D008380 1.5e-29 133.3 138 46.4
Carub.0007s1471 Capsella rubella HOM05D006529 ORTHO05D008380 1.9e-29 132.9 138 47.1
HanXRQChr09g0238511 Helianthus annuus HOM05D006529 ORTHO05D008380 1.9e-29 132.9 129 51.2
Sp7g24240 Schrenkiella parvula HOM05D006529 ORTHO05D008380 1.9e-29 132.9 138 47.1
Thhalv10026289m.g Eutrema salsugineum HOM05D006529 ORTHO05D008380 3.3e-29 132.1 129 48.1
Sed0011062 Sechium edule HOM05D006529 ORTHO05D008380 4.3e-29 131.7 124 48.4
PSO063G6648 Papaver somniferum HOM05D006529 ORTHO05D008380 5.6e-29 131.3 127 50.4
Phvul.002G305700 Phaseolus vulgaris HOM05D006529 ORTHO05D008380 7.4e-29 131.0 133 51.9
Psat7g019320 Pisum sativum HOM05D006529 ORTHO05D008380 1.6e-28 129.8 133 48.9
MSTRG.10586 Avicennia marina HOM05D006529 ORTHO05D008380 2.1e-28 129.4 125 48.8
Actinidia29893 Actinidia chinensis HOM05D006529 ORTHO05D008380 2.8e-28 129.0 146 48.6
CDE05G3131 Ceratophyllum demersum HOM05D006529 ORTHO05D008380 1.8e-27 126.3 128 43.0
SalBow1G6389 Salvia bowleyana HOM05D006529 ORTHO05D008380 1.8e-27 126.3 125 48.0
SalBow1G6632 Salvia bowleyana HOM05D006529 ORTHO05D008380 1.8e-27 126.3 125 48.0
CANSAT56G3512 Cannabis sativa HOM05D006529 ORTHO05D008380 4.0e-27 125.2 116 55.2
Aqoxy199s004 Aquilegia oxysepala HOM05D006529 ORTHO05D008380 1.2e-26 123.6 124 53.2
Cpa.g.sc78.59 Carica papaya HOM05D006529 ORTHO05D008380 1.3e-25 120.2 118 48.3
CSS0046887 Camellia sinensis var. sinensis HOM05D006529 ORTHO05D008380 1.7e-25 119.8 103 57.3
Migut.K00572 Erythranthe guttata HOM05D006529 ORTHO05D008380 8.4e-25 117.5 125 44.8
Os01g0559300 Oryza sativa ssp. japonica HOM05D006529 ORTHO05D008380 8.4e-25 117.5 124 46.8
Zm00001eb356780 Zea mays HOM05D006529 ORTHO05D008380 2.7e-23 112.5 119 45.4
HanXRQChr03g0061021 Helianthus annuus HOM05D006529 ORTHO05D008380 6.0e-23 111.3 120 47.5
HPP92_005506 Vanilla planifolia HOM05D006529 ORTHO05D008380 1.3e-22 110.2 74 62.2
SGA_v2.0_scaffold210G42089 Striga asiatica HOM05D006529 ORTHO05D008380 5.6e-21 104.8 116 44.0
Lalb_Chr09g0331701 Lupinus albus HOM05D006529 ORTHO05D008380 2.4e-19 99.4 98 52.0
Lsat_1_v5_gn_7_38121 Lactuca sativa HOM05D006529 ORTHO05D008380 1.5e-18 96.7 116 41.4
Sabra06G0121800 Salix brachista HOM05D006529 ORTHO05D008380 4.3e-13 78.6 85 48.2
CsaV3_1G040070 Cucumis sativus L. HOM05D006529 ORTHO05D008380 3.1e-11 72.4 52 50.0
SHI02791 Sapria himalayana HOM05D006529 ORTHO05D008380 2.0e-10 69.7 78 43.6
Aa31LG3G600 Aethionema arabicum HOM05D006529 ORTHO05D008380 2.2e-09 66.2 61 44.3
Sc18g0001790 Simmondsia chinensis HOM05D006529 ORTHO05D008380 3.8e-09 65.5 47 59.6
C01p22040 Brassica napus HOM05D006529 ORTHO05D008380 6.7e-06 54.7 47 48.9
BolC1t02133H Brassica oleracea HOM05D006529 ORTHO05D008380 6.7e-06 54.7 47 48.9


User provided reference genes

Program Settings