Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN26G3321 Fragaria x ananassa HOM05D001739 ORTHO05D015654 0.0e+00 1093.6 569 100.0
FAN26G0106 Fragaria x ananassa HOM05D001739 ORTHO05D015654 3.9e-312 1073.9 579 97.6
FvH4_1g08730 Fragaria vesca HOM05D001739 ORTHO05D015654 1.1e-291 1006.1 579 91.0
FAN26G3373 Fragaria x ananassa HOM05D001739 ORTHO05D015654 5.4e-280 967.2 587 89.1
FvH4_1g08691 Fragaria vesca HOM05D001739 ORTHO05D015654 8.1e-276 953.4 570 88.4
FAN19G1672 Fragaria x ananassa HOM05D001739 ORTHO05D015654 9.0e-259 896.7 583 82.2
FAN19G2992 Fragaria x ananassa HOM05D001739 ORTHO05D015654 5.8e-250 867.5 570 80.2
FvH4_1g08750 Fragaria vesca HOM05D001739 ORTHO05D015654 3.4e-234 815.1 570 76.7
RcHm_v2.0_Chr2g0095131 Rosa chinensis HOM05D001739 ORTHO05D015654 1.3e-180 637.1 590 63.2
FAN26G3327 Fragaria x ananassa HOM05D001739 ORTHO05D015654 1.2e-146 524.2 570 57.4
RcHm_v2.0_Chr2g0094991 Rosa chinensis HOM05D001739 ORTHO05D029616 1.1e-120 438.0 599 48.9
FAN26G1219 Fragaria x ananassa HOM05D001739 ORTHO05D210162 6.9e-118 428.7 356 67.4
RcHm_v2.0_Chr2g0095061 Rosa chinensis HOM05D001739 ORTHO05D029616 1.5e-117 427.6 605 48.3
FAN26G3315 Fragaria x ananassa HOM05D001739 ORTHO05D025407 1.9e-107 394.0 596 46.1
FAN10G4203 Fragaria x ananassa HOM05D001739 ORTHO05D029616 1.1e-104 384.8 601 44.3
FvH4_1g08660 Fragaria vesca HOM05D001739 ORTHO05D025407 2.2e-103 380.6 596 44.5
FAN23G2998 Fragaria x ananassa HOM05D001739 ORTHO05D198978 5.9e-101 372.5 264 75.0
FAN19G1997 Fragaria x ananassa HOM05D001739 ORTHO05D015654 2.6e-96 357.1 202 92.6
FAN28G3010 Fragaria x ananassa HOM05D001739 ORTHO05D207861 2.2e-92 344.0 233 76.8
FvH4_1g08670 Fragaria vesca HOM05D001739 ORTHO05D025407 8.5e-92 342.0 597 43.2
RcHm_v2.0_Chr2g0095731 Rosa chinensis HOM05D001739 ORTHO05D004575 4.9e-71 273.1 562 38.4
FAN23G1590 Fragaria x ananassa HOM05D001739 ORTHO05D004575 2.7e-69 267.3 499 40.1
FvH4_1g09210 Fragaria vesca HOM05D001739 ORTHO05D004575 1.3e-68 265.0 499 40.1
FAN26G0091 Fragaria x ananassa HOM05D001739 ORTHO05D004575 8.6e-68 262.3 499 40.1
FAN26G1120 Fragaria x ananassa HOM05D001739 ORTHO05D004575 1.9e-67 261.2 499 40.1
FAN19G0975 Fragaria x ananassa HOM05D001739 ORTHO05D004575 2.5e-67 260.8 499 39.9
MD15G1221900 Malus domestica HOM05D001739 ORTHO05D004575 9.5e-67 258.8 487 39.4
Prupe.7G193800 Prunus persica HOM05D001739 ORTHO05D004575 2.1e-66 257.7 494 38.3
FAN26G1945 Fragaria x ananassa HOM05D001739 ORTHO05D035581 8.0e-66 255.8 590 35.9
FAN28G0236 Fragaria x ananassa HOM05D001739 ORTHO05D004575 1.4e-65 255.0 528 38.1
Prupe.6G204500 Prunus persica HOM05D001739 ORTHO05D004575 2.2e-63 247.7 466 39.3
Dinv25520 Davidia involucrata HOM05D001739 ORTHO05D004575 2.9e-63 247.3 500 37.2
TWI32G0648 Tripterygium wilfordii HOM05D001739 ORTHO05D004575 6.4e-63 246.1 514 35.8
FAN19G0960 Fragaria x ananassa HOM05D001739 ORTHO05D025407 5.4e-62 243.0 333 46.5
Cfa002954 Carpinus fangiana HOM05D001739 ORTHO05D004575 7.8e-61 239.2 478 36.6
MD02G1099100 Malus domestica HOM05D001739 ORTHO05D004575 1.0e-60 238.8 458 39.3
Manes.16G091500 Manihot esculenta HOM05D001739 ORTHO05D004575 2.3e-60 237.7 478 36.6
FAN23G1058 Fragaria x ananassa HOM05D001739 ORTHO05D025407 3.0e-60 237.3 333 46.8
Hma1.2p1_0169F.1_g074380 Hydrangea macrophylla HOM05D001739 ORTHO05D004575 1.1e-59 235.3 479 36.5
COL.COLO4_21223 Corchorus olitorius HOM05D001739 ORTHO05D004575 1.5e-59 235.0 466 35.4
Lj7C690T11 Lonicera japonica HOM05D001739 ORTHO05D004575 1.9e-59 234.6 479 36.1
Atru.chr7.1752 Acer truncatum HOM05D001739 ORTHO05D004575 5.6e-59 233.0 509 35.4
CiPaw.03G202600 Carya illinoinensis HOM05D001739 ORTHO05D004575 9.5e-59 232.3 524 34.2
Rhsim05G0003800 Rhododendron simsii HOM05D001739 ORTHO05D004575 1.6e-58 231.5 467 35.1
CSS0017458 Camellia sinensis var. sinensis HOM05D001739 ORTHO05D004575 2.8e-58 230.7 492 36.0
Lj4g0016027 Lotus japonicus HOM05D001739 ORTHO05D004575 6.2e-58 229.6 474 35.7
Ciclev10023308m.g Citrus clementina HOM05D001739 ORTHO05D004575 8.1e-58 229.2 479 35.7
Lsat_1_v5_gn_7_35381 Lactuca sativa HOM05D001739 ORTHO05D004575 8.1e-58 229.2 474 35.7
Potri.006G137900 Populus trichocarpa HOM05D001739 ORTHO05D004575 2.3e-57 227.6 496 34.5
vmacro17113 Vaccinium macrocarpon HOM05D001739 ORTHO05D004575 5.2e-57 226.5 486 34.2
Cpa.g.sc32.6 Carica papaya HOM05D001739 ORTHO05D004575 6.8e-57 226.1 467 35.8
QL11p002157 Quercus lobata HOM05D001739 ORTHO05D004575 2.6e-56 224.2 503 35.4
CsaV3_1G041350 Cucumis sativus L. HOM05D001739 ORTHO05D004575 3.4e-56 223.8 488 35.7
MELO3C015548.2 Cucumis melo HOM05D001739 ORTHO05D004575 5.8e-56 223.0 488 35.7
FvH4_1g13570 Fragaria vesca HOM05D001739 ORTHO05D004575 5.8e-56 223.0 529 35.5
TAR383G0739 Trochodendron aralioides HOM05D001739 ORTHO05D004575 5.8e-56 223.0 501 33.9
ClCG03G014800 Citrullus lanatus HOM05D001739 ORTHO05D004575 7.5e-56 222.6 487 35.7
Nitab4.5_0007773g0020 Nicotiana tabacum HOM05D001739 ORTHO05D004575 7.5e-56 222.6 491 33.4
PGR142G3865 Punica granatum HOM05D001739 ORTHO05D004575 1.3e-55 221.9 495 34.5
Thecc.09G071800 Theobroma cacao HOM05D001739 ORTHO05D004575 1.7e-55 221.5 475 33.9
Gohir.A07G016500 Gossypium hirsutum HOM05D001739 ORTHO05D004575 8.3e-55 219.2 478 33.5
Lalb_Chr12g0200311 Lupinus albus HOM05D001739 ORTHO05D004575 1.1e-54 218.8 477 35.6
FvH4_1g13610 Fragaria vesca HOM05D001739 ORTHO05D004575 1.9e-54 218.0 533 34.9
Gorai.001G017100 Gossypium raimondii HOM05D001739 ORTHO05D004575 1.9e-54 218.0 478 33.5
FAN19G0770 Fragaria x ananassa HOM05D001739 ORTHO05D004575 3.2e-54 217.2 533 34.9
GSVIVG01023097001 Vitis vinifera HOM05D001739 ORTHO05D004575 3.2e-54 217.2 453 35.8
Lalb_Chr13g0299281 Lupinus albus HOM05D001739 ORTHO05D004575 4.1e-54 216.9 497 35.2
Prupe.7G186700 Prunus persica HOM05D001739 ORTHO05D004575 4.1e-54 216.9 499 35.7
arahy.Tifrunner.gnm1.ann1.SDZ4E8 Arachis hypogaea HOM05D001739 ORTHO05D004575 5.4e-54 216.5 490 34.1
DCAR_005064 Daucus carota HOM05D001739 ORTHO05D004575 5.4e-54 216.5 502 33.3
Gohir.D07G016300 Gossypium hirsutum HOM05D001739 ORTHO05D004575 7.1e-54 216.1 478 33.3
Sabra18G0055900 Salix brachista HOM05D001739 ORTHO05D004575 7.1e-54 216.1 479 34.0
Duzib168G0208 Durio zibethinus HOM05D001739 ORTHO05D004575 2.1e-53 214.5 476 33.2
Sed0021617 Sechium edule HOM05D001739 ORTHO05D004575 1.3e-52 211.8 485 34.0
arahy.Tifrunner.gnm1.ann1.9HZQ4R Arachis hypogaea HOM05D001739 ORTHO05D004575 1.7e-52 211.5 490 33.7
HanXRQChr09g0273551 Helianthus annuus HOM05D001739 ORTHO05D004575 1.7e-52 211.5 530 32.5
vmacro23084 Vaccinium macrocarpon HOM05D001739 ORTHO05D004575 3.9e-52 210.3 481 33.7
Ca_09790_v3 Cicer arietinum L. HOM05D001739 ORTHO05D004575 5.1e-52 209.9 489 33.9
Nn8g40294 Nelumbo nucifera HOM05D001739 ORTHO05D004575 5.1e-52 209.9 474 33.8
Sopen07g021980 Solanum pennellii HOM05D001739 ORTHO05D004575 5.1e-52 209.9 490 32.4
vmacro17095 Vaccinium macrocarpon HOM05D001739 ORTHO05D004575 6.6e-52 209.5 481 33.7
Nitab4.5_0001565g0110 Nicotiana tabacum HOM05D001739 ORTHO05D004575 1.5e-51 208.4 540 31.9
HanXRQChr04g0122371 Helianthus annuus HOM05D001739 ORTHO05D004575 3.3e-51 207.2 478 34.3
MSTRG.5982 Avicennia marina HOM05D001739 ORTHO05D004575 1.2e-50 205.3 491 32.8
Glyma.13G112900 Glycine max HOM05D001739 ORTHO05D004575 1.2e-50 205.3 476 34.0
CANSAT56G3462 Cannabis sativa HOM05D001739 ORTHO05D004575 1.6e-50 204.9 546 32.4
Medtr1g072890 Medicago truncatula HOM05D001739 ORTHO05D004575 4.7e-50 203.4 475 33.7
Glyma.17G046900 Glycine max HOM05D001739 ORTHO05D004575 1.8e-49 201.4 490 33.3
ECA240G3214 Erigeron canadensis HOM05D001739 ORTHO05D004575 2.4e-49 201.1 538 30.3
Cc06_g12580 Coffea canephora HOM05D001739 ORTHO05D004575 3.1e-49 200.7 482 33.6
Phvul.003G128600 Phaseolus vulgaris HOM05D001739 ORTHO05D004575 3.1e-49 200.7 476 33.4
arahy.Tifrunner.gnm1.ann1.WW7XLJ Arachis hypogaea HOM05D001739 ORTHO05D004575 6.8e-49 199.5 477 34.4
CAN.G63.12 Capsicum annuum HOM05D001739 ORTHO05D004575 8.9e-49 199.1 490 31.8
Psat6g134600 Pisum sativum HOM05D001739 ORTHO05D004575 2.0e-48 198.0 494 32.0
Sed0004150 Sechium edule HOM05D001739 ORTHO05D004575 3.4e-48 197.2 488 33.0
Psat7g002920 Pisum sativum HOM05D001739 ORTHO05D004575 1.3e-47 195.3 468 32.7
arahy.Tifrunner.gnm1.ann1.7457H2 Arachis hypogaea HOM05D001739 ORTHO05D004575 2.9e-47 194.1 475 33.7
EL10Ac8g19018 Beta vulgaris HOM05D001739 ORTHO05D004575 4.9e-47 193.4 495 31.9
VMungo1215G0229 Vigna mungo HOM05D001739 ORTHO05D004575 4.9e-47 193.4 488 32.4
AUR62039592 Chenopodium quinoa HOM05D001739 ORTHO05D004575 8.4e-47 192.6 478 31.0
DCAR_003861 Daucus carota HOM05D001739 ORTHO05D004575 2.4e-46 191.0 441 34.0
AUR62019633 Chenopodium quinoa HOM05D001739 ORTHO05D004575 4.2e-46 190.3 505 30.1
FvH4_7g02570 Fragaria vesca HOM05D001739 ORTHO05D029616 9.2e-46 189.1 252 49.6
FAN26G0455 Fragaria x ananassa HOM05D001739 ORTHO05D004575 9.2e-46 189.1 528 32.6
Haze_26051 Corylus avellana HOM05D001739 ORTHO05D004575 1.6e-45 188.3 476 33.0
SHI02768 Sapria himalayana HOM05D001739 ORTHO05D004575 3.5e-45 187.2 475 31.6
Solyc07g042380.4 Solanum lycopersicum HOM05D001739 ORTHO05D004575 6.0e-45 186.4 569 29.7
FvH4_5g06040 Fragaria vesca HOM05D001739 ORTHO05D029422 7.8e-45 186.0 524 31.9
Ah.09g229240 Amaranthus hybridus HOM05D001739 ORTHO05D004575 1.0e-44 185.7 490 29.8
Medtr1g072970 Medicago truncatula HOM05D001739 ORTHO05D004575 1.3e-44 185.3 486 31.3
Aqoxy7G03292 Aquilegia oxysepala HOM05D001739 ORTHO05D004575 3.0e-44 184.1 514 31.9
SGA_v2.0_scaffold281G46906 Striga asiatica HOM05D001739 ORTHO05D004575 3.0e-44 184.1 508 31.5
TPR.G13945 Trifolium pratense HOM05D001739 ORTHO05D004575 7.3e-43 179.5 476 32.8
TPR.G18558 Trifolium pratense HOM05D001739 ORTHO05D004575 7.3e-43 179.5 481 32.0
THA.LOC104809049 Tarenaya hassleriana HOM05D001739 ORTHO05D004575 2.8e-42 177.6 485 30.7
Thhalv10016153m.g Eutrema salsugineum HOM05D001739 ORTHO05D004575 1.1e-41 175.6 460 31.7
PSO104G0064 Papaver somniferum HOM05D001739 ORTHO05D004575 4.0e-41 173.7 559 28.6
FAN26G0957 Fragaria x ananassa HOM05D001739 ORTHO05D015654 5.3e-41 173.3 104 83.7
PSO421G0331 Papaver somniferum HOM05D001739 ORTHO05D004575 6.9e-41 172.9 559 28.8
AUR62028280 Chenopodium quinoa HOM05D001739 ORTHO05D004575 1.2e-40 172.2 505 29.7
Sp4g16630 Schrenkiella parvula HOM05D001739 ORTHO05D004575 2.6e-40 171.0 526 30.0
FAN08G1830 Fragaria x ananassa HOM05D001739 ORTHO05D004575 2.9e-39 167.5 528 30.7
unitig_744.g24652 Utricularia gibba HOM05D001739 ORTHO05D004575 2.9e-39 167.5 478 29.9
HPP92_004359 Vanilla planifolia HOM05D001739 ORTHO05D004575 2.9e-39 167.5 477 30.6
A03p19100 Brassica napus HOM05D001739 ORTHO05D004575 4.9e-39 166.8 441 32.0
BolC3t14614H Brassica oleracea HOM05D001739 ORTHO05D004575 4.9e-39 166.8 441 32.0
BraA03t11167Z Brassica rapa HOM05D001739 ORTHO05D004575 4.9e-39 166.8 441 32.0
Sc24g0001530 Simmondsia chinensis HOM05D001739 ORTHO05D004575 8.4e-39 166.0 523 28.5
Aa31LG9G14080 Aethionema arabicum HOM05D001739 ORTHO05D004575 1.1e-38 165.6 449 31.6
ATR0681G226 Amborella trichopoda HOM05D001739 ORTHO05D004575 1.4e-38 165.2 461 30.6
BcaC01g05798 Brassica carinata HOM05D001739 ORTHO05D004575 1.4e-38 165.2 441 31.3
C03p22320 Brassica napus HOM05D001739 ORTHO05D004575 2.4e-38 164.5 441 31.7
AT2G34357 Arabidopsis thaliana HOM05D001739 ORTHO05D004575 3.2e-38 164.1 449 31.0
CDE12G0121 Ceratophyllum demersum HOM05D001739 ORTHO05D004575 3.2e-38 164.1 546 29.3
Peaxi162Scf00191g01112 Petunia axillaris HOM05D001739 ORTHO05D004575 7.1e-38 162.9 469 29.2
AL4G30320 Arabidopsis lyrata HOM05D001739 ORTHO05D004575 2.7e-37 161.0 449 31.0
Hund23253 Selenicereus undatus HOM05D001739 ORTHO05D004575 3.5e-37 160.6 500 27.6
BraA05t20081Z Brassica rapa HOM05D001739 ORTHO05D004575 1.3e-36 158.7 456 31.6
Carub.0004s1602 Capsella rubella HOM05D001739 ORTHO05D004575 1.3e-36 158.7 451 30.8
A05p11320 Brassica napus HOM05D001739 ORTHO05D004575 6.6e-36 156.4 420 32.6
BcaB01g03896 Brassica carinata HOM05D001739 ORTHO05D004575 1.5e-35 155.2 444 31.5
BcaB02g09558 Brassica carinata HOM05D001739 ORTHO05D004575 2.5e-35 154.5 464 30.8
BcaC02g11500 Brassica carinata HOM05D001739 ORTHO05D004575 9.6e-35 152.5 441 30.8
C04p14660 Brassica napus HOM05D001739 ORTHO05D004575 4.8e-34 150.2 444 30.4
BolC4t23047H Brassica oleracea HOM05D001739 ORTHO05D004575 4.8e-34 150.2 444 30.4
CARHR128440 Cardamine hirsuta HOM05D001739 ORTHO05D004575 1.8e-33 148.3 420 31.4
FAN18G1935 Fragaria x ananassa HOM05D001739 ORTHO05D029422 4.0e-33 147.1 460 31.1
FvH4_5g05990 Fragaria vesca HOM05D001739 ORTHO05D029422 5.3e-33 146.7 514 29.2
BcaC02g11606 Brassica carinata HOM05D001739 ORTHO05D004575 2.0e-32 144.8 441 30.6
C04p13350 Brassica napus HOM05D001739 ORTHO05D004575 2.0e-32 144.8 441 30.6
TPR.G34376 Trifolium pratense HOM05D001739 ORTHO05D004575 9.3e-30 136.0 342 32.2
FAN18G0943 Fragaria x ananassa HOM05D001739 ORTHO05D029422 6.7e-28 129.8 514 28.4
Os02g0782100 Oryza sativa ssp. japonica HOM05D001739 ORTHO05D004575 1.1e-27 129.0 365 29.9
FAN23G2122 Fragaria x ananassa HOM05D001739 ORTHO05D035581 3.3e-27 127.5 216 44.4
SEGI_37036 Sequoiadendron giganteum HOM05D001739 ORTHO05D004575 1.6e-26 125.2 426 27.7
CAN.G333.15 Capsicum annuum HOM05D001739 ORTHO05D004575 2.1e-26 124.8 277 34.7
Pp3c2_3190 Physcomitrium patens HOM05D001739 ORTHO05D004575 6.2e-26 123.2 469 25.4
CDE04G0230 Ceratophyllum demersum HOM05D001739 ORTHO05D004575 1.8e-25 121.7 396 29.5
SEGI_16086 Sequoiadendron giganteum HOM05D001739 ORTHO05D004575 3.4e-24 117.5 470 26.6
FAN28G1182 Fragaria x ananassa HOM05D001739 ORTHO05D004575 3.5e-21 107.5 149 46.3
Zm00001eb257110 Zea mays HOM05D001739 ORTHO05D004575 3.9e-20 104.0 480 24.2
FAN19G1230 Fragaria x ananassa HOM05D001739 ORTHO05D206032 5.1e-20 103.6 73 74.0
Mapoly0061s0020 Marchantia polymorpha HOM05D001739 ORTHO05D004575 9.6e-19 99.4 491 24.0
SMO361G0459 Selaginella moellendorffii HOM05D001739 ORTHO05D004575 1.0e-15 89.4 486 23.7
AUR62025277 Chenopodium quinoa HOM05D001739 ORTHO05D004575 4.9e-15 87.0 177 34.5
FAN04G1381 Fragaria x ananassa HOM05D001739 ORTHO05D004575 4.2e-14 84.0 169 38.5
Sc18g0003470 Simmondsia chinensis HOM05D001739 ORTHO05D004575 5.5e-14 83.6 227 31.7
FvH4_1g13590 Fragaria vesca HOM05D001739 ORTHO05D035581 7.1e-14 83.2 139 44.6
Eucgr.C00777 Eucalyptus grandis HOM05D001739 ORTHO05D004575 1.0e-12 79.3 199 32.2
MD02G1098900 Malus domestica HOM05D001739 ORTHO05D004575 7.4e-11 73.2 116 44.8
Gohir.A11G312800 Gossypium hirsutum HOM05D001739 ORTHO05D006605 6.3e-10 70.1 448 22.3
BcaNung01063 Brassica carinata HOM05D001739 ORTHO05D006605 2.4e-09 68.2 459 23.1
BraA01t01423Z Brassica rapa HOM05D001739 ORTHO05D006605 2.4e-09 68.2 460 23.9
A01p14820 Brassica napus HOM05D001739 ORTHO05D006605 4.1e-09 67.4 459 24.0
Duzib093G0255 Durio zibethinus HOM05D001739 ORTHO05D006605 4.1e-09 67.4 495 22.4
EL10Ac8g19019 Beta vulgaris HOM05D001739 ORTHO05D010736 5.3e-09 67.0 147 28.6
Gorai.007G360700 Gossypium raimondii HOM05D001739 ORTHO05D006605 6.9e-09 66.6 478 21.5
FvH4_6g18960 Fragaria vesca HOM05D001739 ORTHO05D035276 9.0e-09 66.2 165 33.3
Manes.09G020800 Manihot esculenta HOM05D001739 ORTHO05D006605 3.8e-07 60.8 480 20.6
Rhsim13G0126900 Rhododendron simsii HOM05D001739 ORTHO05D004575 5.0e-07 60.5 101 37.6
Prupe.6G204300 Prunus persica HOM05D001739 ORTHO05D004575 2.5e-06 58.2 87 42.5
GSVIVG01033265001 Vitis vinifera HOM05D001739 ORTHO05D006605 4.2e-06 57.4 468 21.6
BcaC09g50980 Brassica carinata HOM05D001739 ORTHO05D006605 9.4e-06 56.2 459 22.9
C01p18510 Brassica napus HOM05D001739 ORTHO05D006605 9.4e-06 56.2 459 22.9
BolC1t01774H Brassica oleracea HOM05D001739 ORTHO05D006605 9.4e-06 56.2 459 22.9


User provided reference genes

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