Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN26G3258 Fragaria x ananassa HOM05D006805 ORTHO05D008656 3.1e-226 788.1 391 100.0
FAN19G2522 Fragaria x ananassa HOM05D006805 ORTHO05D008656 2.9e-192 675.2 429 82.1
FvH4_1g12510 Fragaria vesca HOM05D006805 ORTHO05D008656 5.2e-189 664.5 423 82.3
FAN23G0481 Fragaria x ananassa HOM05D006805 ORTHO05D008656 1.5e-183 646.4 403 82.6
RcHm_v2.0_Chr2g0100411 Rosa chinensis HOM05D006805 ORTHO05D008656 6.8e-173 610.9 423 75.7
Prupe.7G161800 Prunus persica HOM05D006805 ORTHO05D008656 7.8e-145 517.7 425 64.2
MD15G1252400 Malus domestica HOM05D006805 ORTHO05D008656 5.6e-135 485.0 426 60.6
TWI73G0963 Tripterygium wilfordii HOM05D006805 ORTHO05D008656 7.1e-130 468.0 413 58.8
CANSAT01G1867 Cannabis sativa HOM05D006805 ORTHO05D008656 1.2e-129 467.2 417 60.4
CSS0042312 Camellia sinensis var. sinensis HOM05D006805 ORTHO05D008656 4.6e-129 465.3 420 57.6
Atru.chr3.728 Acer truncatum HOM05D006805 ORTHO05D008656 7.8e-129 464.5 421 59.4
CiPaw.08G138000 Carya illinoinensis HOM05D006805 ORTHO05D008656 2.5e-127 459.5 408 60.0
QL06p035053 Quercus lobata HOM05D006805 ORTHO05D008656 2.5e-127 459.5 403 59.3
Cfa006913 Carpinus fangiana HOM05D006805 ORTHO05D008656 8.1e-126 454.5 405 60.0
Potri.007G019400 Populus trichocarpa HOM05D006805 ORTHO05D008656 2.4e-125 453.0 405 58.0
GSVIVG01018866001 Vitis vinifera HOM05D006805 ORTHO05D008656 4.4e-124 448.7 405 56.8
Thecc.01G027300 Theobroma cacao HOM05D006805 ORTHO05D008656 1.6e-121 440.3 405 56.8
Lalb_Chr16g0391011 Lupinus albus HOM05D006805 ORTHO05D008656 2.3e-120 436.4 393 58.5
THA.LOC104804245 Tarenaya hassleriana HOM05D006805 ORTHO05D008656 3.0e-120 436.0 426 54.5
Glyma.02G052900 Glycine max HOM05D006805 ORTHO05D008656 8.7e-120 434.5 393 58.8
Gohir.A02G167800 Gossypium hirsutum HOM05D006805 ORTHO05D008656 1.1e-119 434.1 406 54.7
Rhsim08G0122900 Rhododendron simsii HOM05D006805 ORTHO05D008656 1.1e-119 434.1 421 54.4
VMungo0251G3732 Vigna mungo HOM05D006805 ORTHO05D008656 1.1e-119 434.1 390 59.2
Sed0012409 Sechium edule HOM05D006805 ORTHO05D008656 2.5e-119 433.0 418 53.8
Gorai.003G012500 Gossypium raimondii HOM05D006805 ORTHO05D008656 3.3e-119 432.6 406 54.7
Hma1.2p1_0913F.1_g235930 Hydrangea macrophylla HOM05D006805 ORTHO05D008656 4.3e-119 432.2 417 55.4
Duzib147G1209 Durio zibethinus HOM05D006805 ORTHO05D008656 7.4e-119 431.4 412 54.9
Phvul.003G257300 Phaseolus vulgaris HOM05D006805 ORTHO05D008656 9.6e-119 431.0 390 57.4
Dinv40030 Davidia involucrata HOM05D006805 ORTHO05D008656 1.3e-118 430.6 437 52.6
Haze_03843 Corylus avellana HOM05D006805 ORTHO05D008656 1.6e-118 430.3 453 53.9
Nn1g05800 Nelumbo nucifera HOM05D006805 ORTHO05D008656 2.1e-118 429.9 403 55.3
Nitab4.5_0004708g0010 Nicotiana tabacum HOM05D006805 ORTHO05D008656 6.2e-118 428.3 390 55.6
Gohir.D03G012200 Gossypium hirsutum HOM05D006805 ORTHO05D008656 1.4e-117 427.2 406 53.9
CAN.G358.30 Capsicum annuum HOM05D006805 ORTHO05D008656 1.8e-117 426.8 408 55.4
TAR381G0553 Trochodendron aralioides HOM05D006805 ORTHO05D008656 5.3e-117 425.2 418 53.3
Thhalv10025347m.g Eutrema salsugineum HOM05D006805 ORTHO05D008656 1.5e-116 423.7 401 54.9
Peaxi162Scf00418g00926 Petunia axillaris HOM05D006805 ORTHO05D008656 1.5e-116 423.7 400 55.2
PGR102G0609 Punica granatum HOM05D006805 ORTHO05D008656 1.5e-116 423.7 424 53.3
Lj4g0018076 Lotus japonicus HOM05D006805 ORTHO05D008656 5.8e-116 421.8 397 57.4
PSO731G0058 Papaver somniferum HOM05D006805 ORTHO05D008656 7.6e-116 421.4 422 53.6
COL.COLO4_22005 Corchorus olitorius HOM05D006805 ORTHO05D008656 9.9e-116 421.0 426 53.5
Carub.0007s0387 Capsella rubella HOM05D006805 ORTHO05D008656 1.3e-115 420.6 425 53.6
Manes.01G140000 Manihot esculenta HOM05D006805 ORTHO05D008656 1.7e-115 420.2 409 55.7
Psat4g096160 Pisum sativum HOM05D006805 ORTHO05D008656 2.2e-115 419.9 414 56.3
CsaV3_6G046700 Cucumis sativus L. HOM05D006805 ORTHO05D008656 3.8e-115 419.1 411 53.3
Aqoxy5G01548 Aquilegia oxysepala HOM05D006805 ORTHO05D008656 1.4e-114 417.2 392 55.9
arahy.Tifrunner.gnm1.ann1.P9L48X Arachis hypogaea HOM05D006805 ORTHO05D008656 1.4e-114 417.2 391 56.0
Solyc02g084810.3 Solanum lycopersicum HOM05D006805 ORTHO05D008656 1.9e-114 416.8 407 55.5
Sopen02g029480 Solanum pennellii HOM05D006805 ORTHO05D008656 1.9e-114 416.8 407 55.5
AL7G14650 Arabidopsis lyrata HOM05D006805 ORTHO05D008656 2.4e-114 416.4 415 53.5
Thhalv10000178m.g Eutrema salsugineum HOM05D006805 ORTHO05D008656 4.2e-114 415.6 411 53.8
Sp7g34100 Schrenkiella parvula HOM05D006805 ORTHO05D008656 4.2e-114 415.6 401 54.4
BolC1t00250H Brassica oleracea HOM05D006805 ORTHO05D008656 1.2e-113 414.1 392 55.4
Hund16454 Selenicereus undatus HOM05D006805 ORTHO05D008656 1.6e-113 413.7 383 55.4
BcaNung00732 Brassica carinata HOM05D006805 ORTHO05D008656 2.7e-113 412.9 392 55.1
Medtr8g076840 Medicago truncatula HOM05D006805 ORTHO05D008656 2.7e-113 412.9 392 56.9
C01p02610 Brassica napus HOM05D006805 ORTHO05D008656 3.5e-113 412.5 433 52.2
Eucgr.J02381 Eucalyptus grandis HOM05D006805 ORTHO05D008656 7.9e-113 411.4 409 51.8
Cc07_g10060 Coffea canephora HOM05D006805 ORTHO05D008656 1.0e-112 411.0 408 54.2
arahy.Tifrunner.gnm1.ann1.FKKR7E Arachis hypogaea HOM05D006805 ORTHO05D008656 6.7e-112 408.3 372 56.5
CARHR244770 Cardamine hirsuta HOM05D006805 ORTHO05D008656 1.9e-111 406.8 406 52.7
Sabra07G0016600 Salix brachista HOM05D006805 ORTHO05D008656 2.5e-111 406.4 432 50.5
MELO3C007867.2 Cucumis melo HOM05D006805 ORTHO05D008656 3.3e-111 406.0 438 51.1
BraA01t00229Z Brassica rapa HOM05D006805 ORTHO05D008656 4.0e-109 399.1 415 52.3
Ciclev10025725m.g Citrus clementina HOM05D006805 ORTHO05D008656 1.5e-108 397.1 365 57.5
Nitab4.5_0000723g0180 Nicotiana tabacum HOM05D006805 ORTHO05D008656 3.4e-108 396.0 372 55.4
MSTRG.2490 Avicennia marina HOM05D006805 ORTHO05D008656 1.0e-107 394.4 407 51.1
A01p02400 Brassica napus HOM05D000394 ORTHO05D008656 1.7e-107 393.7 430 50.9
DCAR_025973 Daucus carota HOM05D006805 ORTHO05D008656 3.5e-105 386.0 407 50.6
Migut.H02510 Erythranthe guttata HOM05D006805 ORTHO05D008656 4.6e-105 385.6 426 48.8
Duzib264G1030 Durio zibethinus HOM05D006805 ORTHO05D008656 1.0e-104 384.4 427 50.4
AT4G36440 Arabidopsis thaliana HOM05D006805 ORTHO05D008656 5.1e-104 382.1 416 50.7
AUR62007618 Chenopodium quinoa HOM05D006805 ORTHO05D008656 1.9e-103 380.2 360 55.0
HanXRQChr14g0441241 Helianthus annuus HOM05D006805 ORTHO05D008656 4.3e-103 379.0 401 50.6
SalBow8G5631 Salvia bowleyana HOM05D006805 ORTHO05D008656 2.6e-100 369.8 434 45.6
arahy.Tifrunner.gnm1.ann1.CY3TH7 Arachis hypogaea HOM05D006805 ORTHO05D008656 3.8e-99 365.9 383 53.5
ECA238G0382 Erigeron canadensis HOM05D006805 ORTHO05D008656 7.2e-98 361.7 394 48.0
SGA_v2.0_scaffold51G18803 Striga asiatica HOM05D006805 ORTHO05D008656 4.6e-97 359.0 468 44.0
Hma1.2p1_2955F.1_g330740 Hydrangea macrophylla HOM05D006805 ORTHO05D008656 4.3e-95 352.4 343 54.2
Ca_22341_v3 Cicer arietinum L. HOM05D006805 ORTHO05D008656 3.1e-93 346.3 414 49.3
ClCG01G019940 Citrullus lanatus HOM05D006531 ORTHO05D008656 1.5e-92 344.0 433 45.5
ATR1154G040 Amborella trichopoda HOM05D006805 ORTHO05D008656 4.5e-92 342.4 361 50.4
BcaNung05308 Brassica carinata HOM05D000394 ORTHO05D000299 1.3e-91 340.9 351 51.0
vmacro17722 Vaccinium macrocarpon HOM05D006805 ORTHO05D008656 6.1e-89 332.0 351 50.7
HPP92_008328 Vanilla planifolia HOM05D006805 ORTHO05D008656 7.9e-89 331.6 370 47.6
Cpa.g.sc6.179 Carica papaya HOM05D006805 ORTHO05D008656 1.4e-82 310.8 365 47.7
CDE06G0805 Ceratophyllum demersum HOM05D006805 ORTHO05D008656 6.3e-78 295.4 345 47.0
Hma1.2p1_0913F.1_g235940 Hydrangea macrophylla HOM05D006805 ORTHO05D008656 5.3e-77 292.4 265 56.6
MBI16_g23836_MAGBIO Magnolia biondii HOM05D006805 ORTHO05D008656 1.9e-74 283.9 360 44.2
Sc03g0003190 Simmondsia chinensis HOM05D006805 ORTHO05D008656 2.3e-72 276.9 400 41.5
Aa31LG6G13250 Aethionema arabicum HOM05D006805 ORTHO05D008656 6.7e-72 275.4 312 48.1
Lj4C209T2 Lonicera japonica HOM05D006805 ORTHO05D008656 1.3e-70 271.2 260 52.7
Sc03g0003200 Simmondsia chinensis HOM05D006805 ORTHO05D004508 1.2e-68 264.6 231 57.6
AUR62004104 Chenopodium quinoa HOM05D006805 ORTHO05D008656 7.2e-66 255.4 251 53.0
unitig_61.g26353 Utricularia gibba HOM05D006805 ORTHO05D008656 8.8e-64 248.4 304 43.8
SGA_v2.0_scaffold7G03543 Striga asiatica HOM05D006805 ORTHO05D003527 4.8e-62 242.7 189 60.3
HanXRQChr09g0256121 Helianthus annuus HOM05D006805 ORTHO05D008656 1.8e-61 240.7 261 50.6
Lsat_1_v5_gn_2_78040 Lactuca sativa HOM05D006805 ORTHO05D008656 1.6e-57 227.6 206 55.3
AagrBONN_evm.TU.Sc2ySwM_228.1023 Anthoceros agrestis HOM05D006805 ORTHO05D001783 1.7e-54 217.6 393 34.9
Pp3c15_5920 Physcomitrium patens HOM05D006805 ORTHO05D008656 1.6e-52 211.1 409 32.8
SMO141G0060 Selaginella moellendorffii HOM05D006805 ORTHO05D008656 6.6e-51 205.7 355 34.9
Pp3c9_15730 Physcomitrium patens HOM05D006805 ORTHO05D008656 7.3e-50 202.2 414 33.1
HanXRQChr12g0370271 Helianthus annuus HOM05D006805 ORTHO05D008656 3.6e-49 199.9 138 68.1
Mapoly0033s0048 Marchantia polymorpha HOM05D006805 ORTHO05D008656 2.3e-48 197.2 398 32.4
TPR.G21539 Trifolium pratense HOM05D000894 ORTHO05D001833 1.5e-47 194.5 129 69.0
Glyma.16G133100 Glycine max HOM05D006805 ORTHO05D008656 2.0e-47 194.1 121 71.1
EL10As8g23891 Beta vulgaris HOM05D006805 ORTHO05D008656 3.7e-46 189.9 213 46.9
Dinv10224 Davidia involucrata HOM05D006805 ORTHO05D008656 1.5e-42 177.9 119 68.9
TPR.G21535 Trifolium pratense HOM05D006805 ORTHO05D008656 6.4e-38 162.5 112 70.5
AL6G38800 Arabidopsis lyrata HOM05D006805 ORTHO05D008656 7.0e-37 159.1 111 68.5
HanXRQChr16g0499431 Helianthus annuus HOM05D006805 ORTHO05D008656 1.0e-35 155.2 263 34.6
EL10Ac7g17413 Beta vulgaris HOM05D006805 ORTHO05D008656 2.9e-30 137.1 109 52.3
Glyma.10G129950 Glycine max HOM05D006805 ORTHO05D008656 4.3e-26 123.2 93 59.1
MD02G1139100 Malus domestica HOM05D006805 ORTHO05D008656 7.3e-26 122.5 107 56.1
Os01g0262700 Oryza sativa ssp. japonica HOM05D006805 ORTHO05D008656 2.1e-25 120.9 133 50.4
Zm00001eb128340 Zea mays HOM05D006805 ORTHO05D008656 1.8e-24 117.9 153 43.8
Lj2g0002148 Lotus japonicus HOM05D006805 ORTHO05D008656 4.0e-24 116.7 67 76.1
RcHm_v2.0_Chr2g0136281 Rosa chinensis HOM05D006805 ORTHO05D008656 5.4e-13 79.7 42 92.9
HanXRQChr12g0370281 Helianthus annuus HOM05D006805 ORTHO05D008656 1.6e-12 78.2 84 46.4
Aa31LG6G13240 Aethionema arabicum HOM05D006805 ORTHO05D008656 1.8e-08 64.7 66 53.0


User provided reference genes

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