Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN26G3254 Fragaria x ananassa HOM05D006771 ORTHO05D008296 6.3e-310 1066.6 550 100.0
FAN26G2123 Fragaria x ananassa HOM05D006771 ORTHO05D008296 4.7e-297 1023.8 551 97.3
FvH4_1g07370 Fragaria vesca HOM05D006771 ORTHO05D008296 1.4e-285 985.7 551 94.6
FAN28G0978 Fragaria x ananassa HOM05D006771 ORTHO05D008296 6.0e-284 980.3 575 90.6
FAN23G2606 Fragaria x ananassa HOM05D006771 ORTHO05D008296 1.3e-283 979.2 552 93.1
FAN19G1581 Fragaria x ananassa HOM05D006771 ORTHO05D008296 6.6e-275 950.3 551 91.7
RcHm_v2.0_Chr2g0093251 Rosa chinensis HOM05D006771 ORTHO05D008296 6.5e-222 774.2 566 74.7
Prupe.7G210300 Prunus persica HOM05D006771 ORTHO05D008296 2.3e-142 510.0 575 54.8
MD15G1206500 Malus domestica HOM05D006771 ORTHO05D008296 4.5e-106 389.4 577 47.1
QL02p062800 Quercus lobata HOM05D006771 ORTHO05D008296 2.9e-89 333.6 599 40.2
Dinv36762 Davidia involucrata HOM05D006771 ORTHO05D008296 1.6e-74 284.6 637 35.5
CANSAT56G0603 Cannabis sativa HOM05D006771 ORTHO05D008296 7.8e-66 255.8 565 36.5
Cfa003093 Carpinus fangiana HOM05D006771 ORTHO05D008296 3.9e-65 253.4 547 35.8
CiPaw.03G216900 Carya illinoinensis HOM05D006771 ORTHO05D008296 1.5e-64 251.5 619 34.4
Ciclev10010605m.g Citrus clementina HOM05D006771 ORTHO05D008296 3.3e-64 250.4 551 35.2
TAR624G0646 Trochodendron aralioides HOM05D006771 ORTHO05D008296 5.2e-62 243.0 719 31.6
Eucgr.C03649 Eucalyptus grandis HOM05D006771 ORTHO05D008296 5.8e-61 239.6 625 32.5
Thecc.09G090100 Theobroma cacao HOM05D006771 ORTHO05D008296 2.4e-59 234.2 587 33.7
Eucgr.C03893 Eucalyptus grandis HOM05D006771 ORTHO05D008296 2.1e-58 231.1 622 32.0
Gohir.A06G072300 Gossypium hirsutum HOM05D006771 ORTHO05D008296 2.7e-58 230.7 617 33.7
Gohir.D06G070900 Gossypium hirsutum HOM05D006771 ORTHO05D008296 4.3e-56 223.4 618 34.1
Manes.03G033100 Manihot esculenta HOM05D006771 ORTHO05D008296 1.1e-54 218.8 557 32.7
Duzib187G1830 Durio zibethinus HOM05D006771 ORTHO05D008296 4.0e-54 216.9 628 32.8
Gorai.010G082600 Gossypium raimondii HOM05D006771 ORTHO05D008296 2.6e-53 214.2 622 33.4
GSVIVG01015209001 Vitis vinifera HOM05D006771 ORTHO05D008296 3.4e-53 213.8 533 34.3
COL.COLO4_18206 Corchorus olitorius HOM05D006771 ORTHO05D008296 4.1e-51 206.8 582 30.8
Potri.006G151100 Populus trichocarpa HOM05D006771 ORTHO05D008296 1.2e-50 205.3 641 30.3
Atru.chr7.1582 Acer truncatum HOM05D006771 ORTHO05D008296 7.8e-50 202.6 412 39.1
Nn8g38880 Nelumbo nucifera HOM05D006771 ORTHO05D008296 6.6e-49 199.5 622 30.5
TWI63G0991 Tripterygium wilfordii HOM05D006771 ORTHO05D008296 2.4e-46 191.0 662 29.0
CsaV3_2G001480 Cucumis sativus L. HOM05D006771 ORTHO05D008296 8.9e-46 189.1 612 29.7
vmacro23430 Vaccinium macrocarpon HOM05D006771 ORTHO05D008296 1.5e-45 188.3 696 29.9
ClCG11G001770 Citrullus lanatus HOM05D006771 ORTHO05D008296 7.6e-45 186.0 638 28.2
vmacro06287 Vaccinium macrocarpon HOM05D006771 ORTHO05D008296 1.9e-43 181.4 719 28.7
DCAR_031968 Daucus carota HOM05D006771 ORTHO05D008296 6.0e-42 176.4 636 28.6
MD02G1078500 Malus domestica HOM05D006771 ORTHO05D008296 2.3e-41 174.5 264 43.6
PGR102G2735 Punica granatum HOM05D006771 ORTHO05D008296 3.9e-41 173.7 602 30.1
Sed0013958 Sechium edule HOM05D006771 ORTHO05D008296 6.6e-41 172.9 660 28.3
CSS0032707 Camellia sinensis var. sinensis HOM05D006771 ORTHO05D008296 8.7e-41 172.6 473 32.3
Duzib168G0935 Durio zibethinus HOM05D006771 ORTHO05D008296 1.1e-40 172.2 296 41.6
DCAR_024688 Daucus carota HOM05D006771 ORTHO05D008296 7.3e-40 169.5 552 28.8
CSS0016785 Camellia sinensis var. sinensis HOM05D006771 ORTHO05D008296 1.7e-36 158.3 405 31.6
Actinidia29883 Actinidia chinensis HOM05D006771 ORTHO05D008296 2.2e-36 157.9 464 31.7
SalBow1G1031 Salvia bowleyana HOM05D006771 ORTHO05D008296 6.4e-36 156.4 617 27.2
HanXRQChr12g0354831 Helianthus annuus HOM05D006771 ORTHO05D008296 1.4e-35 155.2 570 27.4
arahy.Tifrunner.gnm1.ann1.H0G9IY Arachis hypogaea HOM05D006771 ORTHO05D008296 1.9e-35 154.8 429 32.9
Gohir.A07G010700 Gossypium hirsutum HOM05D006771 ORTHO05D008296 5.4e-35 153.3 273 40.3
Gorai.001G011400 Gossypium raimondii HOM05D006771 ORTHO05D008296 1.2e-34 152.1 276 40.6
Gohir.D07G011000 Gossypium hirsutum HOM05D006771 ORTHO05D008296 1.6e-34 151.8 276 40.6
Solyc07g039190.4 Solanum lycopersicum HOM05D006771 ORTHO05D008296 3.5e-34 150.6 632 27.2
Glyma.09G062700 Glycine max HOM05D006771 ORTHO05D008296 6.0e-34 149.8 400 33.5
PGSC0003DMG401013152 Solanum tuberosum HOM05D006771 ORTHO05D008296 5.1e-33 146.7 654 28.3
CAN.G235.1 Capsicum annuum HOM05D006771 ORTHO05D008296 6.6e-33 146.4 654 26.9
Phvul.009G232800 Phaseolus vulgaris HOM05D006771 ORTHO05D008296 6.6e-33 146.4 413 32.9
TPR.G35458 Trifolium pratense HOM05D006771 ORTHO05D008296 1.1e-32 145.6 618 27.2
Glyma.15G169200 Glycine max HOM05D006771 ORTHO05D008296 4.3e-32 143.7 398 31.9
arahy.Tifrunner.gnm1.ann1.LUTY24 Arachis hypogaea HOM05D006771 ORTHO05D008296 9.6e-32 142.5 462 30.1
MBI04_g34126_MAGBIO Magnolia biondii HOM05D006771 ORTHO05D008296 1.6e-31 141.7 518 29.0
Lj6g0004334 Lotus japonicus HOM05D006771 ORTHO05D008296 1.1e-30 139.0 379 34.8
Ca_02153_v3 Cicer arietinum L. HOM05D006771 ORTHO05D008296 1.4e-30 138.7 299 36.5
Lalb_Chr08g0232051 Lupinus albus HOM05D006771 ORTHO05D008296 1.8e-30 138.3 164 50.0
Medtr2g038710 Medicago truncatula HOM05D006771 ORTHO05D008296 4.0e-30 137.1 586 29.4
Aqoxy7G01223_Aqoxy7G01224 Aquilegia oxysepala HOM05D006771 ORTHO05D008296 6.9e-30 136.3 130 54.6
PSO832G0455 Papaver somniferum HOM05D006771 ORTHO05D008296 6.9e-30 136.3 164 48.2
Sabra06G0119600 Salix brachista HOM05D006771 ORTHO05D008296 1.2e-29 135.6 685 26.4
Cc06_g11360 Coffea canephora HOM05D006771 ORTHO05D008296 2.6e-29 134.4 349 35.2
Sc18g0002030 Simmondsia chinensis HOM05D006771 ORTHO05D008296 3.4e-29 134.0 131 55.0
Oeu042645.4 Olea europaea HOM05D006771 ORTHO05D008296 3.8e-28 130.6 563 27.9
Nitab4.5_0005033g0010 Nicotiana tabacum HOM05D006771 ORTHO05D008296 4.9e-28 130.2 777 23.8
Psat1g141720 Pisum sativum HOM05D006771 ORTHO05D008296 1.1e-27 129.0 601 28.8
MELO3C004623.2 Cucumis melo HOM05D006771 ORTHO05D008296 1.4e-27 128.6 538 25.1
Nitab4.5_0005634g0020 Nicotiana tabacum HOM05D006771 ORTHO05D008296 1.9e-27 128.3 174 44.3
PSO063G0725 Papaver somniferum HOM05D006771 ORTHO05D008296 3.2e-27 127.5 164 47.0
Ah.14g085210 Amaranthus hybridus HOM05D006771 ORTHO05D008296 4.2e-27 127.1 174 47.1
Cpa.g.sc93.24 Carica papaya HOM05D006771 ORTHO05D008296 2.7e-26 124.4 632 26.4
Rhsim03G0232900 Rhododendron simsii HOM05D006771 ORTHO05D008296 3.5e-26 124.0 622 26.0
Migut.L01489 Erythranthe guttata HOM05D006771 ORTHO05D008296 6.0e-26 123.2 764 25.0
CDE06G0351 Ceratophyllum demersum HOM05D006771 ORTHO05D008296 7.9e-26 122.9 173 42.8
ECA234G3532 Erigeron canadensis HOM05D006771 ORTHO05D008296 7.9e-26 122.9 672 25.9
AT5G56850 Arabidopsis thaliana HOM05D006771 ORTHO05D008296 5.1e-25 120.2 242 36.8
HanXRQChr10g0319291 Helianthus annuus HOM05D006771 ORTHO05D008296 1.5e-24 118.6 572 25.5
AUR62027498 Chenopodium quinoa HOM05D006771 ORTHO05D008296 2.5e-24 117.9 387 31.0
Lsat_1_v5_gn_5_142241 Lactuca sativa HOM05D006771 ORTHO05D008296 4.3e-24 117.1 616 27.6
AL8G32700 Arabidopsis lyrata HOM05D006771 ORTHO05D008296 9.6e-24 115.9 583 26.9
A03p13130 Brassica napus HOM05D006771 ORTHO05D008296 2.1e-23 114.8 572 27.3
Hund06680 Selenicereus undatus HOM05D006771 ORTHO05D008296 2.1e-23 114.8 284 33.1
Peaxi162Scf01121g00112 Petunia axillaris HOM05D006771 ORTHO05D008296 4.8e-23 113.6 193 37.8
Thhalv10013398m.g Eutrema salsugineum HOM05D006771 ORTHO05D008296 1.8e-22 111.7 332 32.8
Sp6g18570 Schrenkiella parvula HOM05D006771 ORTHO05D008296 2.4e-22 111.3 574 26.5
BcaB01g04422 Brassica carinata HOM05D006771 ORTHO05D008296 7.6e-21 106.3 576 28.0
SEGI_22775 Sequoiadendron giganteum HOM05D006771 ORTHO05D008296 7.6e-21 106.3 173 41.0
Carub.0008s1731 Capsella rubella HOM05D006771 ORTHO05D008296 1.7e-20 105.1 409 28.9
BolC3t13977H Brassica oleracea HOM05D006771 ORTHO05D008296 2.2e-20 104.8 560 26.1
C03p15350 Brassica napus HOM05D006771 ORTHO05D008296 2.9e-20 104.4 561 25.5
VMungo1309G1333 Vigna mungo HOM05D006771 ORTHO05D008296 2.7e-18 97.8 288 29.9
BraA03t10624Z Brassica rapa HOM05D006771 ORTHO05D008296 6.0e-18 96.7 589 25.6
SGA_v2.0_scaffold21G09363 Striga asiatica HOM05D006771 ORTHO05D008296 1.0e-17 95.9 551 25.4
unitig_699.g19301 Utricularia gibba HOM05D006771 ORTHO05D008296 1.1e-16 92.4 79 53.2
Pp3c15_7000 Physcomitrium patens HOM05D006771 ORTHO05D008296 1.9e-16 91.7 144 40.3
AagrBONN_evm.TU.Sc2ySwM_344.5001 Anthoceros agrestis HOM05D062329 ORTHO05D008296 1.8e-14 85.1 129 38.0
Pp3c9_2800 Physcomitrium patens HOM05D006771 ORTHO05D008296 6.9e-14 83.2 199 32.7
Pp3c9_2809 Physcomitrium patens HOM05D006771 ORTHO05D008296 6.9e-14 83.2 199 32.7
Cc06_g11350 Coffea canephora HOM05D006771 ORTHO05D008296 8.4e-12 76.3 147 33.3
ATR0716G111 Amborella trichopoda HOM05D006771 ORTHO05D008296 1.1e-11 75.9 83 47.0
Os05g0232200 Oryza sativa ssp. japonica HOM05D006771 ORTHO05D008296 1.4e-11 75.5 129 33.3
Haze_25906 Corylus avellana HOM05D006771 ORTHO05D008296 2.5e-11 74.7 62 61.3
Mapoly0003s0143 Marchantia polymorpha HOM05D006771 ORTHO05D008296 2.5e-11 74.7 131 36.6
EL10Ac8g19225 Beta vulgaris HOM05D006771 ORTHO05D008296 9.3e-11 72.8 237 27.4
Zm00001eb345250 Zea mays HOM05D006771 ORTHO05D008296 2.1e-10 71.6 148 31.1
SEGI_24756 Sequoiadendron giganteum HOM05D006771 ORTHO05D008296 1.4e-06 58.9 129 30.2
CBR_g20330 Chara braunii HOM05D006771 ORTHO05D008296 3.1e-06 57.8 141 28.4
Sopen07g017540 Solanum pennellii HOM05D006771 ORTHO05D008296 3.1e-06 57.8 355 24.5


User provided reference genes

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