Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN26G3228 Fragaria x ananassa HOM05D004723 ORTHO05D006176 0.0e+00 1076.6 698 100.0
FAN19G1371 Fragaria x ananassa HOM05D004723 ORTHO05D006176 3.1e-277 958.4 698 91.0
FvH4_1g11200 Fragaria vesca HOM05D004723 ORTHO05D006176 3.0e-272 941.8 697 90.7
RcHm_v2.0_Chr2g0098611 Rosa chinensis HOM05D004723 ORTHO05D006176 5.9e-244 847.8 714 81.0
FAN23G0842 Fragaria x ananassa HOM05D004723 ORTHO05D006176 4.2e-242 841.6 645 88.2
Prupe.7G173800 Prunus persica HOM05D004723 ORTHO05D006176 1.2e-193 680.6 694 65.7
MD02G1124600 Malus domestica HOM05D004723 ORTHO05D006176 1.3e-174 617.5 701 61.5
Atru.chr3.886 Acer truncatum HOM05D004723 ORTHO05D006176 4.9e-166 589.0 701 58.9
Atru.chr3.897 Acer truncatum HOM05D004723 ORTHO05D006176 4.9e-166 589.0 701 58.9
Cfa007019 Carpinus fangiana HOM05D004723 ORTHO05D006176 2.2e-158 563.5 675 55.9
Potri.005G108800 Populus trichocarpa HOM05D004723 ORTHO05D006176 2.4e-157 560.1 739 56.2
Sabra05G0089200 Salix brachista HOM05D004723 ORTHO05D006176 5.4e-157 558.9 701 57.8
GSVIVG01007226001 Vitis vinifera HOM05D004723 ORTHO05D006176 9.3e-157 558.1 687 53.0
Manes.10G142700 Manihot esculenta HOM05D004723 ORTHO05D006176 7.9e-156 555.1 703 52.2
Cc07_g11220 Coffea canephora HOM05D004723 ORTHO05D006176 1.3e-155 554.3 680 54.0
Haze_03712 Corylus avellana HOM05D004723 ORTHO05D006176 1.9e-154 550.4 675 54.5
QL06p051414 Quercus lobata HOM05D004723 ORTHO05D006176 7.4e-154 548.5 677 58.3
Thecc.08G139800 Theobroma cacao HOM05D004723 ORTHO05D006176 1.4e-152 544.3 725 53.9
CiPaw.07G062200 Carya illinoinensis HOM05D004723 ORTHO05D006176 6.9e-152 542.0 706 54.2
ClCG05G000690 Citrullus lanatus HOM05D004723 ORTHO05D006176 1.0e-150 538.1 720 52.1
Eucgr.I02314 Eucalyptus grandis HOM05D004723 ORTHO05D006176 2.9e-150 536.6 679 52.0
CSS0012813 Camellia sinensis var. sinensis HOM05D004723 ORTHO05D006176 6.5e-150 535.4 673 58.4
Nn5g30820 Nelumbo nucifera HOM05D004723 ORTHO05D006176 1.1e-149 534.6 706 52.5
MELO3C006009.2 Cucumis melo HOM05D004723 ORTHO05D006176 1.4e-149 534.3 726 52.8
CSS0036730 Camellia sinensis var. sinensis HOM05D004723 ORTHO05D006176 2.5e-149 533.5 686 56.1
Sed0008382 Sechium edule HOM05D004723 ORTHO05D006176 5.5e-149 532.3 726 51.7
CsaV3_3G007910 Cucumis sativus L. HOM05D004723 ORTHO05D006176 2.1e-148 530.4 722 54.3
TWI09G0244 Tripterygium wilfordii HOM05D004723 ORTHO05D006176 2.7e-148 530.0 733 49.8
Gorai.012G044400 Gossypium raimondii HOM05D004723 ORTHO05D006176 1.5e-146 524.2 700 51.4
Lj4A224T28 Lonicera japonica HOM05D004723 ORTHO05D006176 7.4e-146 521.9 718 52.4
Duzib147G1420 Durio zibethinus HOM05D004723 ORTHO05D006176 2.4e-144 516.9 721 51.5
Cpa.g.sc6.304 Carica papaya HOM05D004723 ORTHO05D006176 4.1e-144 516.2 713 55.4
MSTRG.10980 Avicennia marina HOM05D004723 ORTHO05D006176 1.5e-143 514.2 673 51.0
Ciclev10025027m.g Citrus clementina HOM05D004723 ORTHO05D006176 2.5e-141 506.9 717 56.5
PGR119G2074 Punica granatum HOM05D004723 ORTHO05D006176 2.5e-141 506.9 746 55.0
Sc07g0001170 Simmondsia chinensis HOM05D004723 ORTHO05D006176 2.5e-141 506.9 676 56.4
Gohir.A05G376600 Gossypium hirsutum HOM05D004723 ORTHO05D006176 2.1e-140 503.8 699 49.8
Solyc02g083470.3 Solanum lycopersicum HOM05D004723 ORTHO05D006176 4.6e-140 502.7 691 55.9
PGSC0003DMG400003588 Solanum tuberosum HOM05D004723 ORTHO05D006176 5.1e-139 499.2 686 54.7
Actinidia35669 Actinidia chinensis HOM05D004723 ORTHO05D006176 1.1e-138 498.0 687 51.5
Nitab4.5_0001789g0050 Nicotiana tabacum HOM05D004723 ORTHO05D006176 7.4e-138 495.4 706 55.2
PSO675G8954 Papaver somniferum HOM05D004723 ORTHO05D006176 9.7e-138 495.0 696 52.6
Nitab4.5_0006899g0060 Nicotiana tabacum HOM05D004723 ORTHO05D006176 8.2e-137 491.9 711 51.5
Sopen02g028260 Solanum pennellii HOM05D004723 ORTHO05D006176 1.8e-136 490.7 693 56.4
Peaxi162Scf00198g00136 Petunia axillaris HOM05D004723 ORTHO05D006176 1.5e-135 487.6 680 57.5
CANSAT25G3056 Cannabis sativa HOM05D004723 ORTHO05D006176 1.9e-133 480.7 702 56.8
HanXRQChr09g0257321 Helianthus annuus HOM05D004723 ORTHO05D006176 1.9e-133 480.7 705 48.8
Hund14070 Selenicereus undatus HOM05D004723 ORTHO05D006176 3.2e-133 479.9 671 55.7
ECA232G2222 Erigeron canadensis HOM05D004723 ORTHO05D006176 4.2e-133 479.6 667 49.3
CAN.G890.41 Capsicum annuum HOM05D004723 ORTHO05D006176 9.4e-133 478.4 544 56.4
TAR628G1348 Trochodendron aralioides HOM05D004723 ORTHO05D006176 1.4e-131 474.6 639 53.5
DCAR_024713 Daucus carota HOM05D004723 ORTHO05D006176 1.8e-131 474.2 740 48.8
Lalb_Chr16g0391491 Lupinus albus HOM05D004723 ORTHO05D006176 1.8e-131 474.2 675 53.2
arahy.Tifrunner.gnm1.ann1.DG5MW5 Arachis hypogaea HOM05D004723 ORTHO05D006176 3.3e-130 469.9 678 50.4
Lsat_1_v5_gn_4_144101 Lactuca sativa HOM05D004723 ORTHO05D006176 1.7e-129 467.6 717 51.7
arahy.Tifrunner.gnm1.ann1.7VD04T Arachis hypogaea HOM05D004723 ORTHO05D006176 1.1e-128 464.9 674 52.4
EL10Ac6g15170 Beta vulgaris HOM05D004723 ORTHO05D006176 2.4e-128 463.8 693 51.8
Rhsim08G0030800 Rhododendron simsii HOM05D004723 ORTHO05D006176 3.1e-128 463.4 633 51.8
PSO541G1155 Papaver somniferum HOM05D004723 ORTHO05D006176 1.2e-127 461.5 752 48.1
VMungo0251G3240 Vigna mungo HOM05D004723 ORTHO05D006176 4.5e-127 459.5 725 47.4
Lj4g0028127 Lotus japonicus HOM05D004723 ORTHO05D006176 5.5e-125 452.6 675 52.3
Phvul.003G266400 Phaseolus vulgaris HOM05D004723 ORTHO05D006176 3.6e-124 449.9 710 50.6
Gohir.1Z049326 Gossypium hirsutum HOM05D004723 ORTHO05D006176 7.9e-124 448.7 705 47.2
Psat7g090000 Pisum sativum HOM05D004723 ORTHO05D006176 1.5e-122 444.5 706 46.6
Glyma.16G122800 Glycine max HOM05D004723 ORTHO05D006176 2.6e-122 443.7 673 49.5
AT3G01160 Arabidopsis thaliana HOM05D004723 ORTHO05D006176 5.7e-122 442.6 692 50.0
AL3G11100 Arabidopsis lyrata HOM05D004723 ORTHO05D006176 7.0e-120 435.6 672 48.7
AUR62003701 Chenopodium quinoa HOM05D004723 ORTHO05D006176 9.1e-120 435.3 690 47.8
Ca_18264_v3 Cicer arietinum L. HOM05D004723 ORTHO05D006176 9.1e-120 435.3 691 49.3
Aqoxy6G02087 Aquilegia oxysepala HOM05D004723 ORTHO05D006176 5.9e-119 432.6 788 43.7
unitig_22.g6210 Utricularia gibba HOM05D004119 ORTHO05D004797 8.5e-118 428.7 717 44.9
Migut.F01827 Erythranthe guttata HOM05D004723 ORTHO05D006176 1.9e-117 427.6 542 50.2
Aa31LG5G12460 Aethionema arabicum HOM05D004723 ORTHO05D006176 7.2e-117 425.6 745 53.8
Sp3g00960 Schrenkiella parvula HOM05D004723 ORTHO05D006176 7.2e-117 425.6 739 48.3
Medtr4g096820 Medicago truncatula HOM05D004723 ORTHO05D006176 1.6e-116 424.5 715 45.2
Glyma.02G045200 Glycine max HOM05D004723 ORTHO05D006176 2.1e-116 424.1 717 44.6
SGA_v2.0_scaffold111G31425 Striga asiatica HOM05D004723 ORTHO05D006176 1.4e-115 421.4 553 50.1
Thhalv10020182m.g Eutrema salsugineum HOM05D004723 ORTHO05D006176 1.1e-112 411.8 666 50.5
BraA05t23177Z Brassica rapa HOM05D004723 ORTHO05D006176 5.9e-111 406.0 715 50.2
BcaC05g30489 Brassica carinata HOM05D004723 ORTHO05D006176 1.7e-110 404.4 698 54.0
Oeu005338.2 Olea europaea HOM05D004723 ORTHO05D006176 2.5e-109 400.6 725 45.0
vmacro18436 Vaccinium macrocarpon HOM05D004723 ORTHO05D006176 2.5e-109 400.6 697 43.9
Carub.0003s0100 Capsella rubella HOM05D004723 ORTHO05D006176 3.6e-108 396.7 703 54.5
AUR62018009 Chenopodium quinoa HOM05D004723 ORTHO05D006176 4.7e-108 396.4 516 47.5
A05p44800 Brassica napus HOM05D004723 ORTHO05D006176 1.4e-107 394.8 715 49.9
CARHR075890 Cardamine hirsuta HOM05D004723 ORTHO05D006176 6.8e-107 392.5 695 50.6
C09p75390 Brassica napus HOM05D004723 ORTHO05D006176 1.5e-106 391.3 700 51.7
Ah.01g003790 Amaranthus hybridus HOM05D004723 ORTHO05D006176 2.0e-106 391.0 676 47.2
ATR0665G361 Amborella trichopoda HOM05D004723 ORTHO05D006176 2.2e-102 377.5 505 49.9
BolC5t35121H Brassica oleracea HOM05D004723 ORTHO05D006176 2.9e-102 377.1 701 50.4
BcaC05g30387 Brassica carinata HOM05D004723 ORTHO05D006176 3.8e-102 376.7 696 48.9
TPR.G4863 Trifolium pratense HOM05D004723 ORTHO05D006176 1.1e-101 375.2 549 52.6
SEGI_08029 Sequoiadendron giganteum HOM05D004723 ORTHO05D006176 1.9e-101 374.4 515 45.8
Dinv40130 Davidia involucrata HOM05D004723 ORTHO05D006176 3.6e-100 370.2 305 65.2
Medtr4g073330 Medicago truncatula HOM05D004723 ORTHO05D006176 2.4e-96 357.5 681 41.9
SHI00027 Sapria himalayana HOM05D004723 ORTHO05D006176 1.3e-94 351.7 622 42.0
AagrBONN_evm.TU.Sc2ySwM_117.2822 Anthoceros agrestis HOM05D004723 ORTHO05D006176 8.6e-94 349.0 709 38.8
Gohir.1Z049627 Gossypium hirsutum HOM05D004723 ORTHO05D006176 8.0e-92 342.4 416 53.8
Zm00001eb323180 Zea mays HOM05D004723 ORTHO05D006176 7.5e-90 335.9 632 47.2
AagrBONN_evm.TU.Sc2ySwM_368.2747 Anthoceros agrestis HOM05D004723 ORTHO05D006176 1.4e-88 331.6 709 44.1
BcaC01g04506 Brassica carinata HOM05D004723 ORTHO05D006176 1.0e-86 325.5 710 45.2
Os07g0531700 Oryza sativa ssp. japonica HOM05D004723 ORTHO05D006176 1.0e-86 325.5 689 41.9
MD15G1238700 Malus domestica HOM05D004723 ORTHO05D006176 9.5e-85 318.9 324 63.6
CDE05G0976 Ceratophyllum demersum HOM05D004723 ORTHO05D006176 2.4e-80 304.3 396 52.5
SMO232G0062 Selaginella moellendorffii HOM05D004723 ORTHO05D006176 3.2e-80 303.9 632 38.4
Pp3c17_7210 Physcomitrium patens HOM05D004723 ORTHO05D006176 1.6e-76 291.6 549 39.0
SMO239G0207 Selaginella moellendorffii HOM05D004723 ORTHO05D006176 2.6e-74 284.3 619 36.8
Thecc.01G155000 Theobroma cacao HOM05D004723 ORTHO05D006176 2.2e-73 281.2 412 51.2
MD15G1238600 Malus domestica HOM05D004723 ORTHO05D006176 4.3e-69 266.9 266 61.7
Mapoly0061s0018 Marchantia polymorpha HOM05D004723 ORTHO05D006176 4.7e-60 236.9 831 29.1
Rhsim08G0030900 Rhododendron simsii HOM05D004723 ORTHO05D006176 6.4e-57 226.5 179 64.2
TAR628G1016 Trochodendron aralioides HOM05D004723 ORTHO05D005421 3.2e-56 224.2 213 58.2
C03p39900 Brassica napus HOM05D004723 ORTHO05D006176 6.6e-54 216.5 199 57.3
HPP92_019125 Vanilla planifolia HOM05D004723 ORTHO05D006176 9.6e-53 212.6 202 51.5
CBR_g41392 Chara braunii HOM05D004723 ORTHO05D006176 4.9e-49 200.3 690 35.2
Gohir.D04G039432 Gossypium hirsutum HOM05D004723 ORTHO05D006176 7.4e-45 186.4 272 43.8
MCO13G085 Micromonas commoda HOM05D004723 ORTHO05D006176 1.4e-43 182.2 445 36.2
PRCOL_00004947 Prasinoderma coloniale HOM05D004723 ORTHO05D006176 4.0e-43 180.6 334 36.2
TPR.G3121 Trifolium pratense HOM05D004723 ORTHO05D006176 5.8e-42 176.8 238 45.8
COL.COLO4_33606 Corchorus olitorius HOM05D004723 ORTHO05D006176 1.7e-41 175.3 266 48.5
COL.COLO4_34179 Corchorus olitorius HOM05D004723 ORTHO05D006176 7.1e-40 169.9 543 30.2
Cre10.g452500 Chlamydomonas reinhardtii HOM05D004723 ORTHO05D006176 1.3e-38 165.6 241 41.1
CDE05G0343 Ceratophyllum demersum HOM05D004723 ORTHO05D006176 1.4e-35 155.6 244 45.1
HPP92_019124 Vanilla planifolia HOM05D004723 ORTHO05D006176 2.0e-34 151.8 214 47.7
BolC3t16253H Brassica oleracea HOM05D004723 ORTHO05D006176 1.0e-25 122.9 110 54.5
TAR628G0893 Trochodendron aralioides HOM05D004723 ORTHO05D006176 7.2e-24 116.7 101 64.4
Medtr3g107330 Medicago truncatula HOM05D004723 ORTHO05D006176 3.9e-22 110.9 203 34.5
GSVIVG01005594001 Vitis vinifera HOM05D004723 ORTHO05D006176 2.2e-20 105.1 197 44.2
TPR.G330 Trifolium pratense HOM05D004723 ORTHO05D006176 8.2e-20 103.2 105 49.5
AagrBONN_evm.TU.Sc2ySwM_117.2819 Anthoceros agrestis HOM05D004723 ORTHO05D006176 2.4e-19 101.7 322 31.1
Dinv40131 Davidia involucrata HOM05D004723 ORTHO05D006176 1.2e-18 99.4 121 51.2
Medtr3g107350 Medicago truncatula HOM05D004723 ORTHO05D006176 2.6e-18 98.2 250 36.4
TPR.G36124 Trifolium pratense HOM05D004723 ORTHO05D006176 5.9e-18 97.1 76 60.5
Oeu046870.1 Olea europaea HOM05D004723 ORTHO05D006176 1.4e-16 92.4 155 44.5
THA.LOC104821168 Tarenaya hassleriana HOM05D004723 ORTHO05D006176 3.2e-16 91.3 154 48.1
Thhalv10017085m.g Eutrema salsugineum HOM05D004723 ORTHO05D006176 1.4e-14 85.9 164 37.2
TPR.G21433 Trifolium pratense HOM05D004723 ORTHO05D006176 1.5e-13 82.4 128 43.8
TPR.G29970 Trifolium pratense HOM05D004723 ORTHO05D006176 3.3e-13 81.3 83 49.4
Lsat_1_v5_gn_5_164041 Lactuca sativa HOM05D004723 ORTHO05D006176 4.4e-13 80.9 214 30.8
GSVIVG01005388001 Vitis vinifera HOM05D004723 ORTHO05D006176 1.7e-12 79.0 78 52.6
FAN17G1680 Fragaria x ananassa HOM05D032679 ORTHO05D022627 1.2e-10 72.8 72 51.4
FAN24G3340 Fragaria x ananassa HOM05D032679 ORTHO05D022627 1.2e-10 72.8 72 51.4
BolC3t16252H Brassica oleracea HOM05D004723 ORTHO05D006176 2.6e-10 71.6 59 62.7
FAN18G3965 Fragaria x ananassa HOM05D032679 ORTHO05D022627 5.9e-10 70.5 72 50.0
FAN22G1655 Fragaria x ananassa HOM05D002244 ORTHO05D035452 2.2e-09 68.6 60 55.0
FAN03G2005 Fragaria x ananassa HOM05D004723 ORTHO05D002269 2.9e-09 68.2 60 55.0
Actinidia28727 Actinidia chinensis HOM05D004723 ORTHO05D006176 5.0e-09 67.4 97 49.5
COL.COLO4_33622 Corchorus olitorius HOM05D004723 ORTHO05D006176 1.9e-08 65.5 80 51.2
Thecc.01G154900 Theobroma cacao HOM05D004723 ORTHO05D006176 7.2e-08 63.5 80 47.5
SEGI_25425 Sequoiadendron giganteum HOM05D004723 ORTHO05D006176 3.0e-06 58.2 63 50.8
Nn1g05556 Nelumbo nucifera HOM05D004723 ORTHO05D006176 5.2e-06 57.4 48 58.3


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