Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN26G3164 Fragaria x ananassa HOM05D011470 ORTHO05D016309 4.7e-163 577.8 290 100.0
FvH4_1g10321 Fragaria vesca HOM05D011470 ORTHO05D016309 6.4e-144 514.2 300 88.3
FAN19G1393 Fragaria x ananassa HOM05D011470 ORTHO05D016309 1.6e-142 509.6 300 87.7
FAN28G0523 Fragaria x ananassa HOM05D011470 ORTHO05D016309 1.7e-128 463.0 265 87.9
FAN19G0228 Fragaria x ananassa HOM05D011470 ORTHO05D016309 4.6e-110 401.7 305 71.1
FvH4_1g10320 Fragaria vesca HOM05D011470 ORTHO05D016309 1.1e-108 397.1 306 70.6
FAN23G1467 Fragaria x ananassa HOM05D011470 ORTHO05D016309 1.2e-76 290.8 215 74.0
FAN28G2048 Fragaria x ananassa HOM05D001313 ORTHO05D001590 8.5e-72 274.6 220 67.3
RcHm_v2.0_Chr2g0097161 Rosa chinensis HOM05D011470 ORTHO05D016309 2.3e-56 223.4 212 60.8
RcHm_v2.0_Chr2g0099621 Rosa chinensis HOM05D000151 ORTHO05D000074 2.3e-32 143.7 301 37.5
FAN28G2605 Fragaria x ananassa HOM05D011470 ORTHO05D016309 8.9e-29 131.7 324 35.8
FAN26G3055 Fragaria x ananassa HOM05D011470 ORTHO05D016309 3.3e-23 113.2 307 33.9
MD15G1237600 Malus domestica HOM05D000151 ORTHO05D000074 3.3e-23 113.2 281 33.8
Prupe.7G176700 Prunus persica HOM05D000151 ORTHO05D000074 2.6e-20 103.6 298 31.5
Prupe.7G176900 Prunus persica HOM05D000151 ORTHO05D000074 3.2e-18 96.7 267 34.8
Prupe.7G176500 Prunus persica HOM05D000151 ORTHO05D000074 5.4e-18 95.9 304 30.9
Prupe.7G176800 Prunus persica HOM05D000151 ORTHO05D000074 1.6e-17 94.4 284 31.7
RcHm_v2.0_Chr2g0098141 Rosa chinensis HOM05D000151 ORTHO05D000074 4.6e-17 92.8 318 28.6
FAN19G1876 Fragaria x ananassa HOM05D000151 ORTHO05D000074 7.8e-17 92.0 332 30.1
FvH4_1g10850 Fragaria vesca HOM05D000151 ORTHO05D000074 8.7e-16 88.6 332 29.8
FAN19G1235 Fragaria x ananassa HOM05D011470 ORTHO05D200022 1.8e-13 80.9 93 45.2
FAN26G1136 Fragaria x ananassa HOM05D000151 ORTHO05D000074 5.3e-13 79.3 292 30.1
FvH4_1g10931 Fragaria vesca HOM05D000151 ORTHO05D000074 9.0e-13 78.6 292 29.8
FAN19G1842 Fragaria x ananassa HOM05D000151 ORTHO05D000074 2.0e-12 77.4 292 29.8
FAN23G2766 Fragaria x ananassa HOM05D000151 ORTHO05D000074 7.6e-12 75.5 276 29.3
FAN06G3748 Fragaria x ananassa HOM05D000287 ORTHO05D002423 2.4e-10 70.5 274 27.4
FvH4_7g25891 Fragaria vesca HOM05D000151 ORTHO05D000074 3.2e-10 70.1 274 27.4
AL3G49820 Arabidopsis lyrata HOM05D000151 ORTHO05D000074 5.4e-10 69.3 308 26.6
Nitab4.5_0003603g0140 Nicotiana tabacum HOM05D000151 ORTHO05D000074 9.3e-10 68.6 321 27.7
C03p57820 Brassica napus HOM05D000151 ORTHO05D000074 4.6e-09 66.2 306 25.8
Dinv12042 Davidia involucrata HOM05D000151 ORTHO05D000074 7.9e-09 65.5 316 27.2
BcaC01g02965 Brassica carinata HOM05D000151 ORTHO05D000074 1.0e-08 65.1 306 25.5
BolC3t18053H Brassica oleracea HOM05D000151 ORTHO05D000074 1.0e-08 65.1 306 25.5
BraA03t13747Z Brassica rapa HOM05D006294 ORTHO05D007668 1.0e-08 65.1 308 26.0
A03p46230 Brassica napus HOM05D006294 ORTHO05D007668 1.3e-08 64.7 306 26.1
CAN.G890.11 Capsicum annuum HOM05D000151 ORTHO05D000074 1.3e-08 64.7 308 28.2
PGSC0003DMG400001546 Solanum tuberosum HOM05D000151 ORTHO05D000074 1.3e-08 64.7 304 28.3
Nitab4.5_0003679g0070 Nicotiana tabacum HOM05D000151 ORTHO05D000074 2.3e-08 63.9 317 26.8
Manes.04G069000 Manihot esculenta HOM05D000151 ORTHO05D000074 8.7e-08 62.0 310 25.8
AT2G17030 Arabidopsis thaliana HOM05D000151 ORTHO05D000074 1.1e-07 61.6 308 26.0
BcaB08g34687 Brassica carinata HOM05D000151 ORTHO05D000074 1.1e-07 61.6 310 24.5
MELO3C007953.2 Cucumis melo HOM05D000151 ORTHO05D000074 1.5e-07 61.2 161 34.2
MD14G1159500 Malus domestica HOM05D000151 ORTHO05D000074 1.9e-07 60.8 189 32.3
CsaV3_6G047620 Cucumis sativus L. HOM05D000151 ORTHO05D000074 3.3e-07 60.1 330 27.9
Eucgr.I01467 Eucalyptus grandis HOM05D000151 ORTHO05D000074 4.3e-07 59.7 320 29.7
Lj3g0018223 Lotus japonicus HOM05D000151 ORTHO05D000074 4.3e-07 59.7 271 27.7
CANSAT25G3017 Cannabis sativa HOM05D000151 ORTHO05D000074 5.6e-07 59.3 263 28.5
Lalb_Chr16g0391571 Lupinus albus HOM05D000151 ORTHO05D000074 5.6e-07 59.3 304 24.7
Aa31LG8G14220 Aethionema arabicum HOM05D000151 ORTHO05D000074 7.4e-07 58.9 303 26.7
Migut.B00040 Erythranthe guttata HOM05D000151 ORTHO05D000074 9.6e-07 58.5 318 27.0
Nn5g30875 Nelumbo nucifera HOM05D000151 ORTHO05D000074 9.6e-07 58.5 339 26.3
Potri.009G140000 Populus trichocarpa HOM05D000151 ORTHO05D000074 1.3e-06 58.2 313 25.2
Sp3g30320 Schrenkiella parvula HOM05D000151 ORTHO05D000074 1.3e-06 58.2 309 26.2
CiPaw.07G005500 Carya illinoinensis HOM05D000151 ORTHO05D000074 2.1e-06 57.4 307 27.7
Prupe.7G177100 Prunus persica HOM05D000151 ORTHO05D000074 2.1e-06 57.4 274 26.3
Thecc.02G052700 Theobroma cacao HOM05D000151 ORTHO05D000074 2.1e-06 57.4 323 26.6
Gorai.012G157200 Gossypium raimondii HOM05D000151 ORTHO05D000074 2.8e-06 57.0 312 28.5
Medtr8g074610 Medicago truncatula HOM05D000151 ORTHO05D000074 6.2e-06 55.8 312 25.3
Peaxi162Scf00300g00317 Petunia axillaris HOM05D000151 ORTHO05D000074 6.2e-06 55.8 312 26.6
CARHR107350 Cardamine hirsuta HOM05D000151 ORTHO05D000074 8.1e-06 55.5 308 26.3


User provided reference genes

Program Settings